RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
SAMM50-205ENST00000493621 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
SAMM50-205ENST00000493621 SPON1Q9HCB6 807 aa17.72■□□□□ 0.43
SAMM50-205ENST00000493621 PPP1R1BQ9UD71 204 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-205ENST00000493621 SOX12O15370 315 aa17.71■□□□□ 0.43
SAMM50-205ENST00000493621 TTC21BQ7Z4L5 1316 aa17.71■□□□□ 0.42
SAMM50-205ENST00000493621 PLSCR1O15162 318 aa17.7■□□□□ 0.42
SAMM50-205ENST00000493621 KCNQ2O43526 872 aa17.7■□□□□ 0.42
SAMM50-205ENST00000493621 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
SAMM50-205ENST00000493621 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
SAMM50-205ENST00000493621 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
SAMM50-205ENST00000493621 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
SAMM50-205ENST00000493621 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
SAMM50-205ENST00000493621 ROCK2O75116 1388 aaKnown RBP17.69■□□□□ 0.42
SAMM50-205ENST00000493621 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
SAMM50-205ENST00000493621 MARCH10Q8NA82 808 aaPredicted RBP17.69■□□□□ 0.42
SAMM50-205ENST00000493621 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
SAMM50-205ENST00000493621 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
SAMM50-205ENST00000493621 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
SAMM50-205ENST00000493621 ANO8Q9HCE9 1232 aaPredicted RBP17.68■□□□□ 0.42
SAMM50-205ENST00000493621 TTC21AQ8NDW8 1320 aa17.68■□□□□ 0.42
SAMM50-205ENST00000493621 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
SAMM50-205ENST00000493621 NFAT5O94916 1531 aa17.67■□□□□ 0.42
SAMM50-205ENST00000493621 MON2Q7Z3U7 1717 aa17.67■□□□□ 0.42
SAMM50-205ENST00000493621 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
SAMM50-205ENST00000493621 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
SAMM50-205ENST00000493621 YY1P25490 414 aa17.65■□□□□ 0.42
SAMM50-205ENST00000493621 NINLQ9Y2I6 1382 aa17.65■□□□□ 0.42
SAMM50-205ENST00000493621 BCL9O00512 1426 aa17.64■□□□□ 0.42
SAMM50-205ENST00000493621 PROM2Q8N271 834 aa17.64■□□□□ 0.41
SAMM50-205ENST00000493621 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
SAMM50-205ENST00000493621 EXOC5O00471 708 aa17.63■□□□□ 0.41
SAMM50-205ENST00000493621 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-205ENST00000493621 LTN1O94822 1766 aa17.63■□□□□ 0.41
SAMM50-205ENST00000493621 ABCC6O95255 1503 aa17.62■□□□□ 0.41
SAMM50-205ENST00000493621 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
SAMM50-205ENST00000493621 TXNRD1Q16881 649 aa17.61■□□□□ 0.41
SAMM50-205ENST00000493621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
SAMM50-205ENST00000493621 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
SAMM50-205ENST00000493621 ZBTB7AO95365 584 aa17.6■□□□□ 0.41
SAMM50-205ENST00000493621 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
SAMM50-205ENST00000493621 MYOM1P52179 1685 aa17.6■□□□□ 0.41
SAMM50-205ENST00000493621 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
SAMM50-205ENST00000493621 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
SAMM50-205ENST00000493621 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
SAMM50-205ENST00000493621 USP31Q70CQ4 1352 aa17.58■□□□□ 0.4
SAMM50-205ENST00000493621 NME9Q86XW9 330 aa17.58■□□□□ 0.4
SAMM50-205ENST00000493621 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
SAMM50-205ENST00000493621 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
SAMM50-205ENST00000493621 NLRP2Q9NX02 1062 aa17.57■□□□□ 0.4
SAMM50-205ENST00000493621 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
SAMM50-205ENST00000493621 ERBB3P21860 1342 aa17.56■□□□□ 0.4
SAMM50-205ENST00000493621 SLC15A2Q16348 729 aa17.56■□□□□ 0.4
SAMM50-205ENST00000493621 TMC1Q8TDI8 760 aa17.56■□□□□ 0.4
SAMM50-205ENST00000493621 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
SAMM50-205ENST00000493621 BTAF1O14981 1849 aa17.56■□□□□ 0.4
SAMM50-205ENST00000493621 PTGER2P43116 358 aa17.55■□□□□ 0.4
SAMM50-205ENST00000493621 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
SAMM50-205ENST00000493621 IL2RBP14784 551 aa17.54■□□□□ 0.4
SAMM50-205ENST00000493621 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
SAMM50-205ENST00000493621 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SAMM50-205ENST00000493621 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
SAMM50-205ENST00000493621 EDC4Q6P2E9 1401 aaKnown RBP17.52■□□□□ 0.4
SAMM50-205ENST00000493621 PAPPAQ13219 1627 aa17.51■□□□□ 0.39
SAMM50-205ENST00000493621 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
SAMM50-205ENST00000493621 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
SAMM50-205ENST00000493621 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
SAMM50-205ENST00000493621 A0A1W2PP64 1363 aa17.49■□□□□ 0.39
SAMM50-205ENST00000493621 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
SAMM50-205ENST00000493621 SYT17Q9BSW7 474 aa17.48■□□□□ 0.39
SAMM50-205ENST00000493621 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
SAMM50-205ENST00000493621 CHD4Q14839 1912 aa17.47■□□□□ 0.39
SAMM50-205ENST00000493621 ZNF827Q17R98 1081 aa17.46■□□□□ 0.39
SAMM50-205ENST00000493621 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
SAMM50-205ENST00000493621 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
SAMM50-205ENST00000493621 DDX54Q8TDD1 881 aaKnown RBP17.45■□□□□ 0.38
SAMM50-205ENST00000493621 IP6K1Q92551 441 aa17.45■□□□□ 0.38
SAMM50-205ENST00000493621 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
SAMM50-205ENST00000493621 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
SAMM50-205ENST00000493621 ARXQ96QS3 562 aa17.44■□□□□ 0.38
SAMM50-205ENST00000493621 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
SAMM50-205ENST00000493621 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
SAMM50-205ENST00000493621 DOT1LQ8TEK3 1739 aa17.43■□□□□ 0.38
SAMM50-205ENST00000493621 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
SAMM50-205ENST00000493621 SHANK3Q9BYB0 1731 aa17.41■□□□□ 0.38
SAMM50-205ENST00000493621 COG3Q96JB2 828 aa17.41■□□□□ 0.38
SAMM50-205ENST00000493621 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
SAMM50-205ENST00000493621 AKT1S1Q96B36 256 aa17.4■□□□□ 0.38
SAMM50-205ENST00000493621 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
SAMM50-205ENST00000493621 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
SAMM50-205ENST00000493621 LY75O60449 1722 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 FBLN1P23142 703 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 HOXC9P31274 260 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 AMPHP49418 695 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 TESK2Q96S53 571 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
SAMM50-205ENST00000493621 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
SAMM50-205ENST00000493621 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
SAMM50-205ENST00000493621 KCNQ4P56696 695 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms