RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
SGIP1-213ENST00000493564 COG3Q96JB2 828 aa13.11□□□□□ -0.31
SGIP1-213ENST00000493564 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
SGIP1-213ENST00000493564 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
SGIP1-213ENST00000493564 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
SGIP1-213ENST00000493564 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
SGIP1-213ENST00000493564 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
SGIP1-213ENST00000493564 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
SGIP1-213ENST00000493564 NFAT5O94916 1531 aa13.07□□□□□ -0.32
SGIP1-213ENST00000493564 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
SGIP1-213ENST00000493564 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
SGIP1-213ENST00000493564 PANK3Q9H999 370 aa13.06□□□□□ -0.32
SGIP1-213ENST00000493564 COL18A1P39060 1754 aa13.06□□□□□ -0.32
SGIP1-213ENST00000493564 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
SGIP1-213ENST00000493564 OVOS2A0A0J9YW53 1432 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 OVOS2Q6IE36 1432 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 AMPHP49418 695 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
SGIP1-213ENST00000493564 CRB1P82279 1406 aa13.05□□□□□ -0.32
SGIP1-213ENST00000493564 RGPD5Q99666 1765 aa13.04□□□□□ -0.32
SGIP1-213ENST00000493564 EP400Q96L91 3159 aa13.04□□□□□ -0.32
SGIP1-213ENST00000493564 ANKRD24Q8TF21 1146 aa13.04□□□□□ -0.32
SGIP1-213ENST00000493564 IP6K1Q92551 441 aa13.04□□□□□ -0.32
SGIP1-213ENST00000493564 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
SGIP1-213ENST00000493564 DEFB132Q7Z7B7 95 aa13.03□□□□□ -0.32
SGIP1-213ENST00000493564 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
SGIP1-213ENST00000493564 HOXC9P31274 260 aa13.02□□□□□ -0.33
SGIP1-213ENST00000493564 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
SGIP1-213ENST00000493564 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
SGIP1-213ENST00000493564 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
SGIP1-213ENST00000493564 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
SGIP1-213ENST00000493564 MYOM1P52179 1685 aa13.01□□□□□ -0.33
SGIP1-213ENST00000493564 LTN1O94822 1766 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 USP54Q70EL1 1684 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 ERBB3P21860 1342 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
SGIP1-213ENST00000493564 TRIM37O94972 964 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 DDB1Q16531 1140 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
SGIP1-213ENST00000493564 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
SGIP1-213ENST00000493564 HSP90AB2PQ58FF8 381 aa12.99□□□□□ -0.33
SGIP1-213ENST00000493564 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
SGIP1-213ENST00000493564 EXOC5O00471 708 aa12.98□□□□□ -0.33
SGIP1-213ENST00000493564 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
SGIP1-213ENST00000493564 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
SGIP1-213ENST00000493564 EN1Q05925 392 aaPredicted RBP12.97□□□□□ -0.33
SGIP1-213ENST00000493564 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
SGIP1-213ENST00000493564 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
SGIP1-213ENST00000493564 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
SGIP1-213ENST00000493564 CCDC7Q96M83 1385 aa12.96□□□□□ -0.33
SGIP1-213ENST00000493564 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
SGIP1-213ENST00000493564 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 APBA3O96018 575 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 IL2RBP14784 551 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 BAG6P46379 1132 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
SGIP1-213ENST00000493564 PTF1AQ7RTS3 328 aa12.94□□□□□ -0.34
SGIP1-213ENST00000493564 MORC1Q86VD1 984 aa12.94□□□□□ -0.34
SGIP1-213ENST00000493564 POLKQ9UBT6 870 aa12.94□□□□□ -0.34
SGIP1-213ENST00000493564 ABCC6O95255 1503 aa12.93□□□□□ -0.34
SGIP1-213ENST00000493564 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
SGIP1-213ENST00000493564 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
SGIP1-213ENST00000493564 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
SGIP1-213ENST00000493564 ADRA2BP18089 450 aa12.92□□□□□ -0.34
SGIP1-213ENST00000493564 CC2D1BQ5T0F9 858 aaKnown RBP12.92□□□□□ -0.34
SGIP1-213ENST00000493564 ACSBG1Q96GR2 724 aa12.92□□□□□ -0.34
SGIP1-213ENST00000493564 INSRP06213 1382 aa12.92□□□□□ -0.34
SGIP1-213ENST00000493564 FLT4P35916 1363 aa12.92□□□□□ -0.34
SGIP1-213ENST00000493564 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
SGIP1-213ENST00000493564 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
SGIP1-213ENST00000493564 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
SGIP1-213ENST00000493564 RTL1A6NKG5 1358 aa12.91□□□□□ -0.34
SGIP1-213ENST00000493564 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
SGIP1-213ENST00000493564 KCNQ2O43526 872 aa12.9□□□□□ -0.34
SGIP1-213ENST00000493564 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
SGIP1-213ENST00000493564 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
SGIP1-213ENST00000493564 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
SGIP1-213ENST00000493564 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
SGIP1-213ENST00000493564 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
SGIP1-213ENST00000493564 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
SGIP1-213ENST00000493564 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
SGIP1-213ENST00000493564 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
SGIP1-213ENST00000493564 EYA1Q99502 592 aa12.88□□□□□ -0.35
SGIP1-213ENST00000493564 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
SGIP1-213ENST00000493564 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
SGIP1-213ENST00000493564 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
SGIP1-213ENST00000493564 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
SGIP1-213ENST00000493564 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
SGIP1-213ENST00000493564 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
SGIP1-213ENST00000493564 TNS2Q63HR2 1409 aa12.87□□□□□ -0.35
SGIP1-213ENST00000493564 NSD2O96028 1365 aa12.86□□□□□ -0.35
SGIP1-213ENST00000493564 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
SGIP1-213ENST00000493564 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
SGIP1-213ENST00000493564 MEGF6O75095 1541 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms