RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 COL18A1P39060 1754 aa13.44□□□□□ -0.26
TCN2-207ENST00000493542 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
TCN2-207ENST00000493542 ZBTB7CA1YPR0 619 aa13.43□□□□□ -0.26
TCN2-207ENST00000493542 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
TCN2-207ENST00000493542 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
TCN2-207ENST00000493542 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
TCN2-207ENST00000493542 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
TCN2-207ENST00000493542 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
TCN2-207ENST00000493542 CRB1P82279 1406 aa13.42□□□□□ -0.26
TCN2-207ENST00000493542 GCP02774 474 aa13.42□□□□□ -0.26
TCN2-207ENST00000493542 SLC15A2Q16348 729 aa13.42□□□□□ -0.26
TCN2-207ENST00000493542 MTFR1LQ9H019 292 aa13.42□□□□□ -0.26
TCN2-207ENST00000493542 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
TCN2-207ENST00000493542 SLIT3O75094 1523 aa13.42□□□□□ -0.26
TCN2-207ENST00000493542 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
TCN2-207ENST00000493542 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
TCN2-207ENST00000493542 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
TCN2-207ENST00000493542 LRRC37A3O60309 1634 aa13.41□□□□□ -0.26
TCN2-207ENST00000493542 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
TCN2-207ENST00000493542 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
TCN2-207ENST00000493542 ARXQ96QS3 562 aa13.4□□□□□ -0.26
TCN2-207ENST00000493542 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
TCN2-207ENST00000493542 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
TCN2-207ENST00000493542 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
TCN2-207ENST00000493542 USP6P35125 1406 aa13.39□□□□□ -0.27
TCN2-207ENST00000493542 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
TCN2-207ENST00000493542 GPR162Q16538 588 aa13.39□□□□□ -0.27
TCN2-207ENST00000493542 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
TCN2-207ENST00000493542 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
TCN2-207ENST00000493542 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
TCN2-207ENST00000493542 CHD4Q14839 1912 aa13.39□□□□□ -0.27
TCN2-207ENST00000493542 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
TCN2-207ENST00000493542 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
TCN2-207ENST00000493542 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
TCN2-207ENST00000493542 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
TCN2-207ENST00000493542 BCL9O00512 1426 aa13.35□□□□□ -0.27
TCN2-207ENST00000493542 NLRP6P59044 892 aa13.34□□□□□ -0.27
TCN2-207ENST00000493542 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
TCN2-207ENST00000493542 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
TCN2-207ENST00000493542 MAP3K5Q99683 1374 aa13.33□□□□□ -0.27
TCN2-207ENST00000493542 CEP350Q5VT06 3117 aa13.33□□□□□ -0.27
TCN2-207ENST00000493542 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
TCN2-207ENST00000493542 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
TCN2-207ENST00000493542 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.28
TCN2-207ENST00000493542 MON2Q7Z3U7 1717 aa13.33□□□□□ -0.28
TCN2-207ENST00000493542 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
TCN2-207ENST00000493542 EXOC5O00471 708 aa13.32□□□□□ -0.28
TCN2-207ENST00000493542 L3MBTL2Q969R5 705 aa13.32□□□□□ -0.28
TCN2-207ENST00000493542 NFAT5O94916 1531 aa13.32□□□□□ -0.28
TCN2-207ENST00000493542 USP54Q70EL1 1684 aa13.31□□□□□ -0.28
TCN2-207ENST00000493542 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
TCN2-207ENST00000493542 TIMELESSQ9UNS1 1208 aa13.31□□□□□ -0.28
TCN2-207ENST00000493542 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
TCN2-207ENST00000493542 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
TCN2-207ENST00000493542 NEUROD1Q13562 356 aa13.29□□□□□ -0.28
TCN2-207ENST00000493542 ZNF827Q17R98 1081 aa13.29□□□□□ -0.28
TCN2-207ENST00000493542 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
TCN2-207ENST00000493542 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
TCN2-207ENST00000493542 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
TCN2-207ENST00000493542 ABCC6O95255 1503 aa13.28□□□□□ -0.28
TCN2-207ENST00000493542 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.28
TCN2-207ENST00000493542 SOX12O15370 315 aa13.27□□□□□ -0.29
TCN2-207ENST00000493542 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
TCN2-207ENST00000493542 LTN1O94822 1766 aa13.27□□□□□ -0.29
TCN2-207ENST00000493542 POLD1P28340 1107 aa13.26□□□□□ -0.29
TCN2-207ENST00000493542 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
TCN2-207ENST00000493542 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
TCN2-207ENST00000493542 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
TCN2-207ENST00000493542 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
TCN2-207ENST00000493542 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
TCN2-207ENST00000493542 GOLGB1Q14789 3259 aaKnown RBP13.25□□□□□ -0.29
TCN2-207ENST00000493542 PAPPAQ13219 1627 aa13.25□□□□□ -0.29
TCN2-207ENST00000493542 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
TCN2-207ENST00000493542 SLC16A10Q8TF71 515 aa13.25□□□□□ -0.29
TCN2-207ENST00000493542 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
TCN2-207ENST00000493542 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
TCN2-207ENST00000493542 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
TCN2-207ENST00000493542 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
TCN2-207ENST00000493542 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
TCN2-207ENST00000493542 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
TCN2-207ENST00000493542 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
TCN2-207ENST00000493542 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
TCN2-207ENST00000493542 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
TCN2-207ENST00000493542 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
TCN2-207ENST00000493542 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
TCN2-207ENST00000493542 BTAF1O14981 1849 aa13.21□□□□□ -0.29
TCN2-207ENST00000493542 HSPA6P17066 643 aa13.21□□□□□ -0.29
TCN2-207ENST00000493542 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
TCN2-207ENST00000493542 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
TCN2-207ENST00000493542 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
TCN2-207ENST00000493542 ERBB3P21860 1342 aa13.19□□□□□ -0.3
TCN2-207ENST00000493542 KCNQ4P56696 695 aa13.19□□□□□ -0.3
TCN2-207ENST00000493542 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
TCN2-207ENST00000493542 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
TCN2-207ENST00000493542 IL2RBP14784 551 aa13.18□□□□□ -0.3
TCN2-207ENST00000493542 SLC27A3Q5K4L6 730 aa13.18□□□□□ -0.3
TCN2-207ENST00000493542 NME9Q86XW9 330 aa13.18□□□□□ -0.3
TCN2-207ENST00000493542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.17□□□□□ -0.3
TCN2-207ENST00000493542 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
TCN2-207ENST00000493542 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms