RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 MRGPRX2Q96LB1 330 aa8.97□□□□□ -0.97
CCNB3-208ENST00000493507 ERFEQ4G0M1 354 aa8.96□□□□□ -0.98
CCNB3-208ENST00000493507 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
CCNB3-208ENST00000493507 SLC10A4Q96EP9 437 aa8.96□□□□□ -0.98
CCNB3-208ENST00000493507 PKD2L1Q9P0L9 805 aa8.96□□□□□ -0.98
CCNB3-208ENST00000493507 CDV3Q9UKY7 258 aaKnown RBP8.96□□□□□ -0.98
CCNB3-208ENST00000493507 MPNDQ8N594 471 aa8.95□□□□□ -0.98
CCNB3-208ENST00000493507 CCDC88BA6NC98 1476 aa8.95□□□□□ -0.98
CCNB3-208ENST00000493507 SIAH2O43255 324 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 GDF9O60383 454 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 PRR20EP86478 221 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 PRR20CP86479 221 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 PRR20DP86480 221 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 PRR20BP86481 221 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 PRR20AP86496 221 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 PCDHB9Q9Y5E1 797 aa8.94□□□□□ -0.98
CCNB3-208ENST00000493507 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
CCNB3-208ENST00000493507 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
CCNB3-208ENST00000493507 MAP4K5Q9Y4K4 846 aa8.93□□□□□ -0.98
CCNB3-208ENST00000493507 CFTRP13569 1480 aa8.93□□□□□ -0.98
CCNB3-208ENST00000493507 WDR62O43379 1518 aa8.93□□□□□ -0.98
CCNB3-208ENST00000493507 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
CCNB3-208ENST00000493507 NBPF20Q3BBV1 942 aa8.92□□□□□ -0.98
CCNB3-208ENST00000493507 CYP4X1Q8N118 509 aa8.92□□□□□ -0.98
CCNB3-208ENST00000493507 CDK15Q96Q40 435 aa8.92□□□□□ -0.98
CCNB3-208ENST00000493507 TTC24A2A3L6 582 aaPredicted RBP8.91□□□□□ -0.98
CCNB3-208ENST00000493507 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
CCNB3-208ENST00000493507 TNFRSF10AO00220 468 aa8.91□□□□□ -0.98
CCNB3-208ENST00000493507 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
CCNB3-208ENST00000493507 VASH1Q7L8A9 365 aaPredicted RBP8.91□□□□□ -0.98
CCNB3-208ENST00000493507 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
CCNB3-208ENST00000493507 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
CCNB3-208ENST00000493507 PDS5BQ9NTI5 1447 aa8.9□□□□□ -0.98
CCNB3-208ENST00000493507 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
CCNB3-208ENST00000493507 ALG2Q9H553 416 aa8.9□□□□□ -0.98
CCNB3-208ENST00000493507 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
CCNB3-208ENST00000493507 ALDH1A1P00352 501 aa8.89□□□□□ -0.99
CCNB3-208ENST00000493507 HDGFL1Q5TGJ6 251 aa8.89□□□□□ -0.99
CCNB3-208ENST00000493507 TOR4AQ9NXH8 423 aa8.89□□□□□ -0.99
CCNB3-208ENST00000493507 TLL2Q9Y6L7 1015 aa8.89□□□□□ -0.99
CCNB3-208ENST00000493507 FANCD2Q9BXW9 1451 aa8.89□□□□□ -0.99
CCNB3-208ENST00000493507 ADH1CP00326 375 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 CALR3Q96L12 384 aaKnown RBP8.88□□□□□ -0.99
CCNB3-208ENST00000493507 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
CCNB3-208ENST00000493507 CEP126Q9P2H0 1117 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 WASF2Q9Y6W5 498 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 MRC2Q9UBG0 1479 aa8.88□□□□□ -0.99
CCNB3-208ENST00000493507 GRM5P41594 1212 aa8.87□□□□□ -0.99
CCNB3-208ENST00000493507 NR5A1Q13285 461 aa8.87□□□□□ -0.99
CCNB3-208ENST00000493507 GLMNQ92990 594 aa8.87□□□□□ -0.99
CCNB3-208ENST00000493507 CEP164Q9UPV0 1460 aa8.86□□□□□ -0.99
CCNB3-208ENST00000493507 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
CCNB3-208ENST00000493507 ESPNB1AK53 854 aa8.85□□□□□ -0.99
CCNB3-208ENST00000493507 DHX9Q08211 1270 aaKnown RBP8.85□□□□□ -0.99
CCNB3-208ENST00000493507 LAPTM4AQ15012 233 aa8.85□□□□□ -0.99
CCNB3-208ENST00000493507 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
CCNB3-208ENST00000493507 ADAMTS19Q8TE59 1207 aa8.85□□□□□ -0.99
CCNB3-208ENST00000493507 J3QL48 77 aa8.84□□□□□ -0.99
CCNB3-208ENST00000493507 GFRA3O60609 400 aa8.84□□□□□ -0.99
CCNB3-208ENST00000493507 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
CCNB3-208ENST00000493507 FSHRP23945 695 aa8.84□□□□□ -0.99
CCNB3-208ENST00000493507 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
CCNB3-208ENST00000493507 SMPD1P17405 629 aa8.82□□□□□ -1
CCNB3-208ENST00000493507 NNTQ13423 1086 aa8.82□□□□□ -1
CCNB3-208ENST00000493507 INTS6LQ5JSJ4 861 aaKnown RBP8.82□□□□□ -1
CCNB3-208ENST00000493507 RNF135Q8IUD6 432 aa8.82□□□□□ -1
CCNB3-208ENST00000493507 CCDC116Q8IYX3 515 aa8.82□□□□□ -1
CCNB3-208ENST00000493507 PHTF2Q8N3S3 785 aa8.82□□□□□ -1
CCNB3-208ENST00000493507 NFATC2IPQ8NCF5 419 aa8.82□□□□□ -1
CCNB3-208ENST00000493507 ARID3CA6NKF2 412 aa8.81□□□□□ -1
CCNB3-208ENST00000493507 SUPT5HO00267 1087 aaKnown RBP8.81□□□□□ -1
CCNB3-208ENST00000493507 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
CCNB3-208ENST00000493507 DGAT1O75907 488 aa8.8□□□□□ -1
CCNB3-208ENST00000493507 RAB15P59190 212 aa8.8□□□□□ -1
CCNB3-208ENST00000493507 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
CCNB3-208ENST00000493507 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
CCNB3-208ENST00000493507 FAM187AA6NFU0 413 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 NR3C2P08235 984 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 CCDC97Q96F63 343 aaPredicted RBP8.79□□□□□ -1
CCNB3-208ENST00000493507 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 SERPINA10Q9UK55 444 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 WDR97A6NE52 1622 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 TOPBP1Q92547 1522 aa8.79□□□□□ -1
CCNB3-208ENST00000493507 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
CCNB3-208ENST00000493507 PKDCCQ504Y2 493 aa8.78□□□□□ -1
CCNB3-208ENST00000493507 PPP1R26Q5T8A7 1209 aaPredicted RBP8.78□□□□□ -1
CCNB3-208ENST00000493507 TARBP1Q13395 1621 aaKnown RBP8.78□□□□□ -1
CCNB3-208ENST00000493507 DNMBPQ6XZF7 1577 aa8.78□□□□□ -1
CCNB3-208ENST00000493507 LZTS3O60299 673 aaPredicted RBP8.77□□□□□ -1.01
CCNB3-208ENST00000493507 SKIP12755 728 aa8.77□□□□□ -1.01
CCNB3-208ENST00000493507 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
CCNB3-208ENST00000493507 HPS1Q92902 700 aa8.77□□□□□ -1.01
CCNB3-208ENST00000493507 UCN2Q96RP3 112 aa8.77□□□□□ -1.01
CCNB3-208ENST00000493507 PPP1R12CQ9BZL4 782 aa8.77□□□□□ -1.01
CCNB3-208ENST00000493507 DOLKQ9UPQ8 538 aa8.77□□□□□ -1.01
CCNB3-208ENST00000493507 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms