RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ABCC6O95255 1503 aa15.56■□□□□ 0.08
LSM2-214ENST00000493387 HOXC9P31274 260 aa15.55■□□□□ 0.08
LSM2-214ENST00000493387 MAP2P11137 1827 aaKnown RBP15.54■□□□□ 0.08
LSM2-214ENST00000493387 BLMP54132 1417 aaPredicted RBP15.54■□□□□ 0.08
LSM2-214ENST00000493387 INSRP06213 1382 aa15.54■□□□□ 0.08
LSM2-214ENST00000493387 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
LSM2-214ENST00000493387 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
LSM2-214ENST00000493387 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
LSM2-214ENST00000493387 C8orf37Q96NL8 207 aa15.53■□□□□ 0.08
LSM2-214ENST00000493387 LRP6O75581 1613 aa15.53■□□□□ 0.08
LSM2-214ENST00000493387 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.08
LSM2-214ENST00000493387 EVA1CP58658 441 aa15.52■□□□□ 0.08
LSM2-214ENST00000493387 FNBP4Q8N3X1 1017 aaPredicted RBP15.52■□□□□ 0.08
LSM2-214ENST00000493387 HSP90AB2PQ58FF8 381 aa15.51■□□□□ 0.07
LSM2-214ENST00000493387 BTG4Q9NY30 223 aa15.51■□□□□ 0.07
LSM2-214ENST00000493387 LTN1O94822 1766 aa15.51■□□□□ 0.07
LSM2-214ENST00000493387 CCER2I3L3R5 266 aa15.5■□□□□ 0.07
LSM2-214ENST00000493387 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
LSM2-214ENST00000493387 AXIN2Q9Y2T1 843 aa15.5■□□□□ 0.07
LSM2-214ENST00000493387 SLIT2O94813 1529 aa15.49■□□□□ 0.07
LSM2-214ENST00000493387 DIAPH1O60610 1272 aaKnown RBP15.49■□□□□ 0.07
LSM2-214ENST00000493387 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
LSM2-214ENST00000493387 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
LSM2-214ENST00000493387 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
LSM2-214ENST00000493387 COL18A1P39060 1754 aa15.49■□□□□ 0.07
LSM2-214ENST00000493387 ERBB3P21860 1342 aa15.48■□□□□ 0.07
LSM2-214ENST00000493387 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
LSM2-214ENST00000493387 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
LSM2-214ENST00000493387 IL13P35225 146 aa15.47■□□□□ 0.07
LSM2-214ENST00000493387 EIF4A2Q14240 407 aaKnown RBP15.47■□□□□ 0.07
LSM2-214ENST00000493387 MIER1Q8N108 512 aa15.47■□□□□ 0.07
LSM2-214ENST00000493387 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
LSM2-214ENST00000493387 PEAK1Q9H792 1746 aa15.47■□□□□ 0.07
LSM2-214ENST00000493387 USP21Q9UK80 565 aa15.47■□□□□ 0.07
LSM2-214ENST00000493387 COL5A2P05997 1499 aaPredicted RBP15.46■□□□□ 0.07
LSM2-214ENST00000493387 AFF2P51816 1311 aa15.46■□□□□ 0.07
LSM2-214ENST00000493387 WDR17Q8IZU2 1322 aa15.46■□□□□ 0.07
LSM2-214ENST00000493387 ZNF772Q68DY9 489 aaPredicted RBP15.46■□□□□ 0.07
LSM2-214ENST00000493387 MRS2Q9HD23 443 aa15.46■□□□□ 0.07
LSM2-214ENST00000493387 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
LSM2-214ENST00000493387 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.06
LSM2-214ENST00000493387 TOM1L2Q6ZVM7 507 aa15.45■□□□□ 0.06
LSM2-214ENST00000493387 VPS72Q15906 364 aa15.44■□□□□ 0.06
LSM2-214ENST00000493387 CARD10Q9BWT7 1032 aa15.44■□□□□ 0.06
LSM2-214ENST00000493387 NLRP2Q9NX02 1062 aa15.44■□□□□ 0.06
LSM2-214ENST00000493387 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
LSM2-214ENST00000493387 COL3A1P02461 1466 aaPredicted RBP15.44■□□□□ 0.06
LSM2-214ENST00000493387 BCL9LQ86UU0 1499 aa15.44■□□□□ 0.06
LSM2-214ENST00000493387 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
LSM2-214ENST00000493387 PLCH1Q4KWH8 1693 aa15.43■□□□□ 0.06
LSM2-214ENST00000493387 CRB1P82279 1406 aa15.43■□□□□ 0.06
LSM2-214ENST00000493387 U2SURPO15042 1029 aaKnown RBP15.42■□□□□ 0.06
LSM2-214ENST00000493387 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.06
LSM2-214ENST00000493387 EYA1Q99502 592 aa15.42■□□□□ 0.06
LSM2-214ENST00000493387 THRAP3Q9Y2W1 955 aaKnown RBP15.42■□□□□ 0.06
LSM2-214ENST00000493387 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
LSM2-214ENST00000493387 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
LSM2-214ENST00000493387 NBPF6Q5VWK0 638 aa15.41■□□□□ 0.06
LSM2-214ENST00000493387 NBPF4Q96M43 638 aa15.41■□□□□ 0.06
LSM2-214ENST00000493387 PNNQ9H307 717 aaKnown RBP15.41■□□□□ 0.06
LSM2-214ENST00000493387 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
LSM2-214ENST00000493387 RGPD5Q99666 1765 aa15.41■□□□□ 0.06
LSM2-214ENST00000493387 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
LSM2-214ENST00000493387 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
LSM2-214ENST00000493387 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
LSM2-214ENST00000493387 IGSF1Q8N6C5 1336 aa15.41■□□□□ 0.06
LSM2-214ENST00000493387 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
LSM2-214ENST00000493387 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
LSM2-214ENST00000493387 QTRT2Q9H974 415 aaKnown RBP15.4■□□□□ 0.06
LSM2-214ENST00000493387 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
LSM2-214ENST00000493387 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
LSM2-214ENST00000493387 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
LSM2-214ENST00000493387 CDCA7Q9BWT1 371 aaPredicted RBP15.39■□□□□ 0.05
LSM2-214ENST00000493387 ATRNO75882 1429 aa15.39■□□□□ 0.05
LSM2-214ENST00000493387 NRAPQ86VF7 1730 aa15.39■□□□□ 0.05
LSM2-214ENST00000493387 SPATA31A1Q5TZJ5 1347 aa15.39■□□□□ 0.05
LSM2-214ENST00000493387 FCHSD2O94868 740 aa15.38■□□□□ 0.05
LSM2-214ENST00000493387 SULT6B1Q6IMI4 303 aa15.38■□□□□ 0.05
LSM2-214ENST00000493387 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
LSM2-214ENST00000493387 NCAPD2Q15021 1401 aa15.37■□□□□ 0.05
LSM2-214ENST00000493387 NEFMP07197 916 aa15.37■□□□□ 0.05
LSM2-214ENST00000493387 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
LSM2-214ENST00000493387 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
LSM2-214ENST00000493387 KDRP35968 1356 aa15.36■□□□□ 0.05
LSM2-214ENST00000493387 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
LSM2-214ENST00000493387 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
LSM2-214ENST00000493387 HMOX1P09601 288 aa15.35■□□□□ 0.05
LSM2-214ENST00000493387 IL2RBP14784 551 aa15.35■□□□□ 0.05
LSM2-214ENST00000493387 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
LSM2-214ENST00000493387 RBM6P78332 1123 aaKnown RBP15.35■□□□□ 0.05
LSM2-214ENST00000493387 USHBP1Q8N6Y0 703 aa15.35■□□□□ 0.05
LSM2-214ENST00000493387 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
LSM2-214ENST00000493387 RSPH6AQ9H0K4 717 aa15.34■□□□□ 0.05
LSM2-214ENST00000493387 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
LSM2-214ENST00000493387 RXRBP28702 533 aa15.33■□□□□ 0.04
LSM2-214ENST00000493387 AEBP1Q8IUX7 1158 aa15.33■□□□□ 0.04
LSM2-214ENST00000493387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.04
LSM2-214ENST00000493387 RGS17Q9UGC6 210 aaPredicted RBP15.33■□□□□ 0.04
LSM2-214ENST00000493387 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
LSM2-214ENST00000493387 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms