RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 VPS72Q15906 364 aa22.9■■□□□ 1.26
CCDC13-208ENST00000492806 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.25
CCDC13-208ENST00000492806 AMER1Q5JTC6 1135 aaPredicted RBP22.89■■□□□ 1.25
CCDC13-208ENST00000492806 RGPD5Q99666 1765 aa22.88■■□□□ 1.25
CCDC13-208ENST00000492806 KIF24Q5T7B8 1368 aa22.87■■□□□ 1.25
CCDC13-208ENST00000492806 MAP2P11137 1827 aaKnown RBP22.87■■□□□ 1.25
CCDC13-208ENST00000492806 EVA1CP58658 441 aa22.86■■□□□ 1.25
CCDC13-208ENST00000492806 RTL1A6NKG5 1358 aa22.86■■□□□ 1.25
CCDC13-208ENST00000492806 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
CCDC13-208ENST00000492806 MAP3K19Q56UN5 1328 aa22.85■■□□□ 1.25
CCDC13-208ENST00000492806 BLMP54132 1417 aaPredicted RBP22.85■■□□□ 1.25
CCDC13-208ENST00000492806 GJD4Q96KN9 370 aaPredicted RBP22.85■■□□□ 1.25
CCDC13-208ENST00000492806 RGS12O14924 1447 aa22.84■■□□□ 1.25
CCDC13-208ENST00000492806 MORC1Q86VD1 984 aa22.84■■□□□ 1.25
CCDC13-208ENST00000492806 IP6K1Q92551 441 aa22.84■■□□□ 1.25
CCDC13-208ENST00000492806 AMPHP49418 695 aa22.83■■□□□ 1.25
CCDC13-208ENST00000492806 STRN4Q9NRL3 753 aa22.83■■□□□ 1.25
CCDC13-208ENST00000492806 AXIN2Q9Y2T1 843 aa22.82■■□□□ 1.24
CCDC13-208ENST00000492806 CCDC9Q9Y3X0 531 aaKnown RBP22.82■■□□□ 1.24
CCDC13-208ENST00000492806 SPATA31A5Q5VU36 1347 aa22.82■■□□□ 1.24
CCDC13-208ENST00000492806 SPATA31A7Q8IWB4 1347 aa22.82■■□□□ 1.24
CCDC13-208ENST00000492806 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
CCDC13-208ENST00000492806 WDR17Q8IZU2 1322 aa22.81■■□□□ 1.24
CCDC13-208ENST00000492806 GLI3P10071 1580 aa22.8■■□□□ 1.24
CCDC13-208ENST00000492806 RRS1Q15050 365 aaKnown RBP22.8■■□□□ 1.24
CCDC13-208ENST00000492806 FLT4P35916 1363 aa22.79■■□□□ 1.24
CCDC13-208ENST00000492806 FAM208AQ9UK61 1670 aaKnown RBP22.79■■□□□ 1.24
CCDC13-208ENST00000492806 FBLN1P23142 703 aa22.79■■□□□ 1.24
CCDC13-208ENST00000492806 HOXC9P31274 260 aa22.79■■□□□ 1.24
CCDC13-208ENST00000492806 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC13-208ENST00000492806 CRB1P82279 1406 aa22.79■■□□□ 1.24
CCDC13-208ENST00000492806 LARP1Q6PKG0 1096 aaKnown RBP22.78■■□□□ 1.24
CCDC13-208ENST00000492806 ERBB3P21860 1342 aa22.78■■□□□ 1.24
CCDC13-208ENST00000492806 SPATA31A1Q5TZJ5 1347 aa22.78■■□□□ 1.24
CCDC13-208ENST00000492806 POLKQ9UBT6 870 aa22.77■■□□□ 1.24
CCDC13-208ENST00000492806 THRAP3Q9Y2W1 955 aaKnown RBP22.77■■□□□ 1.24
CCDC13-208ENST00000492806 PEAK1Q9H792 1746 aa22.77■■□□□ 1.23
CCDC13-208ENST00000492806 INSRP06213 1382 aa22.76■■□□□ 1.23
CCDC13-208ENST00000492806 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
CCDC13-208ENST00000492806 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
CCDC13-208ENST00000492806 CC2D1BQ5T0F9 858 aaKnown RBP22.76■■□□□ 1.23
CCDC13-208ENST00000492806 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
CCDC13-208ENST00000492806 ONECUT3O60422 494 aaPredicted RBP22.75■■□□□ 1.23
CCDC13-208ENST00000492806 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
CCDC13-208ENST00000492806 ANKRD24Q8TF21 1146 aa22.75■■□□□ 1.23
CCDC13-208ENST00000492806 EMILIN1Q9Y6C2 1016 aa22.75■■□□□ 1.23
CCDC13-208ENST00000492806 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
CCDC13-208ENST00000492806 CARD10Q9BWT7 1032 aa22.74■■□□□ 1.23
CCDC13-208ENST00000492806 BARGINQ6ZT62 677 aa22.73■■□□□ 1.23
CCDC13-208ENST00000492806 TCP11L2Q8N4U5 519 aa22.73■■□□□ 1.23
CCDC13-208ENST00000492806 PPM1GO15355 546 aaPredicted RBP22.7■■□□□ 1.22
CCDC13-208ENST00000492806 HSP90AB2PQ58FF8 381 aa22.7■■□□□ 1.22
CCDC13-208ENST00000492806 THSD7AQ9UPZ6 1657 aa22.69■■□□□ 1.22
CCDC13-208ENST00000492806 FAM98CQ17RN3 349 aaKnown RBP22.69■■□□□ 1.22
CCDC13-208ENST00000492806 NLRP2Q9NX02 1062 aa22.69■■□□□ 1.22
CCDC13-208ENST00000492806 WNK3Q9BYP7 1800 aa22.68■■□□□ 1.22
CCDC13-208ENST00000492806 LTV1Q96GA3 475 aaPredicted RBP22.68■■□□□ 1.22
CCDC13-208ENST00000492806 CDCA7Q9BWT1 371 aaPredicted RBP22.68■■□□□ 1.22
CCDC13-208ENST00000492806 USP35Q9P2H5 1018 aa22.68■■□□□ 1.22
CCDC13-208ENST00000492806 SEPT12Q8IYM1 358 aa22.67■■□□□ 1.22
CCDC13-208ENST00000492806 RGPD2P0DJD1 1756 aa22.66■■□□□ 1.22
CCDC13-208ENST00000492806 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
CCDC13-208ENST00000492806 PARP4Q9UKK3 1724 aaKnown RBP22.65■■□□□ 1.22
CCDC13-208ENST00000492806 PARD3Q8TEW0 1356 aa22.64■■□□□ 1.22
CCDC13-208ENST00000492806 A0A0G2JS52 829 aa22.64■■□□□ 1.21
CCDC13-208ENST00000492806 MTHFSP49914 203 aa22.64■■□□□ 1.21
CCDC13-208ENST00000492806 MYT1Q01538 1121 aa22.64■■□□□ 1.21
CCDC13-208ENST00000492806 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.21
CCDC13-208ENST00000492806 CCDC125Q86Z20 511 aa22.63■■□□□ 1.21
CCDC13-208ENST00000492806 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
CCDC13-208ENST00000492806 RALBP1Q15311 655 aa22.62■■□□□ 1.21
CCDC13-208ENST00000492806 NCAPD2Q15021 1401 aa22.6■■□□□ 1.21
CCDC13-208ENST00000492806 EIF4A2Q14240 407 aaKnown RBP22.6■■□□□ 1.21
CCDC13-208ENST00000492806 NBPF6Q5VWK0 638 aa22.6■■□□□ 1.21
CCDC13-208ENST00000492806 NBPF4Q96M43 638 aa22.6■■□□□ 1.21
CCDC13-208ENST00000492806 EP400Q96L91 3159 aa22.6■■□□□ 1.21
CCDC13-208ENST00000492806 IL2RBP14784 551 aa22.59■■□□□ 1.21
CCDC13-208ENST00000492806 PPP2R1AP30153 589 aa22.59■■□□□ 1.21
CCDC13-208ENST00000492806 KRT27Q7Z3Y8 459 aa22.58■■□□□ 1.21
CCDC13-208ENST00000492806 LRRC37A3O60309 1634 aa22.57■■□□□ 1.2
CCDC13-208ENST00000492806 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
CCDC13-208ENST00000492806 PDE3BQ13370 1112 aa22.56■■□□□ 1.2
CCDC13-208ENST00000492806 DDB1Q16531 1140 aa22.56■■□□□ 1.2
CCDC13-208ENST00000492806 EYA1Q99502 592 aa22.56■■□□□ 1.2
CCDC13-208ENST00000492806 IGSF1Q8N6C5 1336 aa22.55■■□□□ 1.2
CCDC13-208ENST00000492806 PLEKHG2Q9H7P9 1386 aa22.54■■□□□ 1.2
CCDC13-208ENST00000492806 EXOC5O00471 708 aa22.54■■□□□ 1.2
CCDC13-208ENST00000492806 RAPGEF4Q8WZA2 1011 aa22.54■■□□□ 1.2
CCDC13-208ENST00000492806 TNS2Q63HR2 1409 aa22.54■■□□□ 1.2
CCDC13-208ENST00000492806 RGPD1P0DJD0 1748 aa22.54■■□□□ 1.2
CCDC13-208ENST00000492806 COL3A1P02461 1466 aaPredicted RBP22.54■■□□□ 1.2
CCDC13-208ENST00000492806 DIAPH1O60610 1272 aaKnown RBP22.53■■□□□ 1.2
CCDC13-208ENST00000492806 IL13P35225 146 aa22.53■■□□□ 1.2
CCDC13-208ENST00000492806 SF3B2Q13435 895 aaKnown RBP22.53■■□□□ 1.2
CCDC13-208ENST00000492806 TATP17735 454 aaPredicted RBP22.52■■□□□ 1.2
CCDC13-208ENST00000492806 USHBP1Q8N6Y0 703 aa22.52■■□□□ 1.2
CCDC13-208ENST00000492806 OVOS2A0A0G2JMS6 1433 aa22.51■■□□□ 1.19
CCDC13-208ENST00000492806 PRKRIP1Q9H875 184 aaPredicted RBP22.51■■□□□ 1.19
CCDC13-208ENST00000492806 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
CCDC13-208ENST00000492806 MEGF6O75095 1541 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms