RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 COG3Q96JB2 828 aa14.76□□□□□ -0.05
CDC42SE1-206ENST00000492796 POLR3GLQ9BT43 218 aa14.75□□□□□ -0.05
CDC42SE1-206ENST00000492796 WNK3Q9BYP7 1800 aa14.74□□□□□ -0.05
CDC42SE1-206ENST00000492796 FAM98CQ17RN3 349 aaKnown RBP14.74□□□□□ -0.05
CDC42SE1-206ENST00000492796 SEPT12Q8IYM1 358 aa14.74□□□□□ -0.05
CDC42SE1-206ENST00000492796 ANKRD26Q9UPS8 1709 aa14.74□□□□□ -0.05
CDC42SE1-206ENST00000492796 FYB1O15117 783 aa14.73□□□□□ -0.05
CDC42SE1-206ENST00000492796 LARP1Q6PKG0 1096 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-206ENST00000492796 CARD14Q9BXL6 1004 aa14.73□□□□□ -0.05
CDC42SE1-206ENST00000492796 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-206ENST00000492796 FAM208AQ9UK61 1670 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-206ENST00000492796 BLMP54132 1417 aaPredicted RBP14.73□□□□□ -0.05
CDC42SE1-206ENST00000492796 PARP4Q9UKK3 1724 aaKnown RBP14.72□□□□□ -0.05
CDC42SE1-206ENST00000492796 WDR17Q8IZU2 1322 aa14.72□□□□□ -0.05
CDC42SE1-206ENST00000492796 C11orf95C9JLR9 678 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE1-206ENST00000492796 BARGINQ6ZT62 677 aa14.72□□□□□ -0.05
CDC42SE1-206ENST00000492796 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
CDC42SE1-206ENST00000492796 CGNL1Q0VF96 1302 aa14.71□□□□□ -0.05
CDC42SE1-206ENST00000492796 KIF7Q2M1P5 1343 aa14.71□□□□□ -0.05
CDC42SE1-206ENST00000492796 A0A0G2JS52 829 aa14.71□□□□□ -0.05
CDC42SE1-206ENST00000492796 MYT1Q01538 1121 aa14.71□□□□□ -0.05
CDC42SE1-206ENST00000492796 TCP11L2Q8N4U5 519 aa14.71□□□□□ -0.05
CDC42SE1-206ENST00000492796 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.053e-7■□□□□ 8.7
CDC42SE1-206ENST00000492796 GGNBP2Q9H3C7 697 aa14.71□□□□□ -0.05
CDC42SE1-206ENST00000492796 RTL1A6NKG5 1358 aa14.71□□□□□ -0.06
CDC42SE1-206ENST00000492796 TOM1L2Q6ZVM7 507 aa14.7□□□□□ -0.06
CDC42SE1-206ENST00000492796 USP35Q9P2H5 1018 aa14.7□□□□□ -0.06
CDC42SE1-206ENST00000492796 ERBB3P21860 1342 aa14.69□□□□□ -0.06
CDC42SE1-206ENST00000492796 KRT27Q7Z3Y8 459 aa14.69□□□□□ -0.06
CDC42SE1-206ENST00000492796 LRRC37A3O60309 1634 aa14.68□□□□□ -0.06
CDC42SE1-206ENST00000492796 CSB-PGBD3P0DP91 1061 aa14.68□□□□□ -0.06
CDC42SE1-206ENST00000492796 NSD2O96028 1365 aa14.68□□□□□ -0.06
CDC42SE1-206ENST00000492796 KIF24Q5T7B8 1368 aa14.68□□□□□ -0.06
CDC42SE1-206ENST00000492796 CCDC7Q96M83 1385 aa14.68□□□□□ -0.06
CDC42SE1-206ENST00000492796 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
CDC42SE1-206ENST00000492796 IP6K1Q92551 441 aa14.67□□□□□ -0.06
CDC42SE1-206ENST00000492796 CARD10Q9BWT7 1032 aa14.67□□□□□ -0.06
CDC42SE1-206ENST00000492796 PANK3Q9H999 370 aa14.67□□□□□ -0.06
CDC42SE1-206ENST00000492796 AMPHP49418 695 aa14.65□□□□□ -0.06
CDC42SE1-206ENST00000492796 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
CDC42SE1-206ENST00000492796 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
CDC42SE1-206ENST00000492796 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
CDC42SE1-206ENST00000492796 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
CDC42SE1-206ENST00000492796 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
CDC42SE1-206ENST00000492796 RGPD1P0DJD0 1748 aa14.64□□□□□ -0.07
CDC42SE1-206ENST00000492796 FLT4P35916 1363 aa14.64□□□□□ -0.07
CDC42SE1-206ENST00000492796 HOXC9P31274 260 aa14.64□□□□□ -0.07
CDC42SE1-206ENST00000492796 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
CDC42SE1-206ENST00000492796 WASHC2AQ641Q2 1341 aa14.64□□□□□ -0.07
CDC42SE1-206ENST00000492796 FBLN1P23142 703 aa14.63□□□□□ -0.07
CDC42SE1-206ENST00000492796 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
CDC42SE1-206ENST00000492796 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
CDC42SE1-206ENST00000492796 MAP2P11137 1827 aaKnown RBP14.63□□□□□ -0.07
CDC42SE1-206ENST00000492796 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
CDC42SE1-206ENST00000492796 INSRP06213 1382 aa14.61□□□□□ -0.07
CDC42SE1-206ENST00000492796 NLRP2Q9NX02 1062 aa14.61□□□□□ -0.07
CDC42SE1-206ENST00000492796 RGPD2P0DJD1 1756 aa14.6□□□□□ -0.07
CDC42SE1-206ENST00000492796 TNS2Q63HR2 1409 aa14.6□□□□□ -0.07
CDC42SE1-206ENST00000492796 EP400Q96L91 3159 aa14.6□□□□□ -0.07
CDC42SE1-206ENST00000492796 DDB1Q16531 1140 aa14.6□□□□□ -0.07
CDC42SE1-206ENST00000492796 TNS1Q9HBL0 1735 aaKnown RBP14.6□□□□□ -0.07
CDC42SE1-206ENST00000492796 OVOS2A0A0G2JMS6 1433 aa14.59□□□□□ -0.07
CDC42SE1-206ENST00000492796 FAM196AQ6ZSG2 479 aa14.59□□□□□ -0.07
CDC42SE1-206ENST00000492796 IL2RBP14784 551 aa14.58□□□□□ -0.08
CDC42SE1-206ENST00000492796 SF3B2Q13435 895 aaKnown RBP14.58□□□□□ -0.08
CDC42SE1-206ENST00000492796 LTV1Q96GA3 475 aaPredicted RBP14.58□□□□□ -0.08
CDC42SE1-206ENST00000492796 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
CDC42SE1-206ENST00000492796 PER1O15534 1290 aaPredicted RBP14.57□□□□□ -0.08
CDC42SE1-206ENST00000492796 HSP90AB2PQ58FF8 381 aa14.57□□□□□ -0.08
CDC42SE1-206ENST00000492796 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
CDC42SE1-206ENST00000492796 BCL9O00512 1426 aa14.57□□□□□ -0.08
CDC42SE1-206ENST00000492796 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
CDC42SE1-206ENST00000492796 MORC1Q86VD1 984 aa14.56□□□□□ -0.08
CDC42SE1-206ENST00000492796 POLKQ9UBT6 870 aa14.56□□□□□ -0.08
CDC42SE1-206ENST00000492796 NPC1L1Q9UHC9 1359 aa14.56□□□□□ -0.08
CDC42SE1-206ENST00000492796 SBF2Q86WG5 1849 aa14.55□□□□□ -0.08
CDC42SE1-206ENST00000492796 EXOC5O00471 708 aa14.55□□□□□ -0.08
CDC42SE1-206ENST00000492796 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE1-206ENST00000492796 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
CDC42SE1-206ENST00000492796 TNNT2P45379 298 aaPredicted RBP14.54□□□□□ -0.08
CDC42SE1-206ENST00000492796 NCAPD2Q15021 1401 aa14.54□□□□□ -0.08
CDC42SE1-206ENST00000492796 SHANK3Q9BYB0 1731 aa14.53□□□□□ -0.08
CDC42SE1-206ENST00000492796 MEGF6O75095 1541 aa14.53□□□□□ -0.08
CDC42SE1-206ENST00000492796 BAG6P46379 1132 aa14.53□□□□□ -0.08
CDC42SE1-206ENST00000492796 RGPD3A6NKT7 1758 aaPredicted RBP14.52□□□□□ -0.08
CDC42SE1-206ENST00000492796 RGPD4Q7Z3J3 1758 aa14.52□□□□□ -0.08
CDC42SE1-206ENST00000492796 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
CDC42SE1-206ENST00000492796 MARCH10Q8NA82 808 aaPredicted RBP14.52□□□□□ -0.09
CDC42SE1-206ENST00000492796 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
CDC42SE1-206ENST00000492796 NHSQ6T4R5 1651 aa14.51□□□□□ -0.09
CDC42SE1-206ENST00000492796 PKD1L3Q7Z443 1732 aa14.5□□□□□ -0.09
CDC42SE1-206ENST00000492796 TRIM37O94972 964 aa14.5□□□□□ -0.09
CDC42SE1-206ENST00000492796 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 PLEKHG2Q9H7P9 1386 aa14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 CC2D1BQ5T0F9 858 aaKnown RBP14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 DEFB132Q7Z7B7 95 aa14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 USHBP1Q8N6Y0 703 aa14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 RAPGEF4Q8WZA2 1011 aa14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
CDC42SE1-206ENST00000492796 RREB1Q92766 1687 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms