RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
CLK1-213ENST00000492793 USP17L3A6NCW0 530 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 USP17L4A6NCW7 530 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 OXLD1Q5BKU9 147 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 RNF20Q5VTR2 975 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 PLPP7Q8NBV4 271 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
CLK1-213ENST00000492793 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
CLK1-213ENST00000492793 PDIA4P13667 645 aaKnown RBP7.33□□□□□ -1.24
CLK1-213ENST00000492793 NFATC2IPQ8NCF5 419 aa7.33□□□□□ -1.24
CLK1-213ENST00000492793 KCTD15Q96SI1 283 aaPredicted RBP7.33□□□□□ -1.24
CLK1-213ENST00000492793 DOLKQ9UPQ8 538 aa7.33□□□□□ -1.24
CLK1-213ENST00000492793 FOXC1Q12948 553 aa7.32□□□□□ -1.24
CLK1-213ENST00000492793 NCOA4Q13772 614 aa7.32□□□□□ -1.24
CLK1-213ENST00000492793 EML3Q32P44 896 aa7.32□□□□□ -1.24
CLK1-213ENST00000492793 IFFO2Q5TF58 517 aa7.32□□□□□ -1.24
CLK1-213ENST00000492793 C1QTNF2Q9BXJ5 285 aa7.32□□□□□ -1.24
CLK1-213ENST00000492793 ESF1Q9H501 851 aaKnown RBP7.32□□□□□ -1.24
CLK1-213ENST00000492793 A0A0G2JS52 829 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 CSB-PGBD3P0DP91 1061 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 MAP7D1Q3KQU3 841 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 TSGA10IPQ3SY00 556 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
CLK1-213ENST00000492793 RETREG2Q8NC44 543 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 MKRN1Q9UHC7 482 aaKnown RBP7.31□□□□□ -1.24
CLK1-213ENST00000492793 PCDHB11Q9Y5F2 797 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 TLL2Q9Y6L7 1015 aa7.31□□□□□ -1.24
CLK1-213ENST00000492793 ZNF697Q5TEC3 545 aa7.3□□□□□ -1.24
CLK1-213ENST00000492793 PHTF2Q8N3S3 785 aa7.3□□□□□ -1.24
CLK1-213ENST00000492793 CCDC85AQ96PX6 553 aaPredicted RBP7.3□□□□□ -1.24
CLK1-213ENST00000492793 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
CLK1-213ENST00000492793 FSHRP23945 695 aa7.29□□□□□ -1.24
CLK1-213ENST00000492793 SPRYD7Q5W111 196 aa7.29□□□□□ -1.24
CLK1-213ENST00000492793 LARP1Q6PKG0 1096 aaKnown RBP7.29□□□□□ -1.24
CLK1-213ENST00000492793 EMID1Q96A84 441 aaPredicted RBP7.29□□□□□ -1.24
CLK1-213ENST00000492793 MRGPRX2Q96LB1 330 aa7.29□□□□□ -1.24
CLK1-213ENST00000492793 NOD1Q9Y239 953 aa7.29□□□□□ -1.24
CLK1-213ENST00000492793 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
CLK1-213ENST00000492793 RASA1P20936 1047 aa7.28□□□□□ -1.24
CLK1-213ENST00000492793 PSME1Q06323 249 aa7.28□□□□□ -1.24
CLK1-213ENST00000492793 PLEKHM2Q8IWE5 1019 aa7.28□□□□□ -1.24
CLK1-213ENST00000492793 SEPT12Q8IYM1 358 aa7.28□□□□□ -1.24
CLK1-213ENST00000492793 CDCA7Q9BWT1 371 aaPredicted RBP7.28□□□□□ -1.24
CLK1-213ENST00000492793 ATP5J2-PTCD1G3V325 749 aa7.27□□□□□ -1.25
CLK1-213ENST00000492793 WNT7AO00755 349 aa7.27□□□□□ -1.25
CLK1-213ENST00000492793 ALDH1A1P00352 501 aa7.27□□□□□ -1.25
CLK1-213ENST00000492793 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
CLK1-213ENST00000492793 INTS6LQ5JSJ4 861 aaKnown RBP7.27□□□□□ -1.25
CLK1-213ENST00000492793 ZNF598Q86UK7 904 aaKnown RBP7.27□□□□□ -1.25
CLK1-213ENST00000492793 SIRT1Q96EB6 747 aa7.27□□□□□ -1.25
CLK1-213ENST00000492793 RBM19Q9Y4C8 960 aaKnown RBP7.27□□□□□ -1.25
CLK1-213ENST00000492793 MAP4K5Q9Y4K4 846 aa7.27□□□□□ -1.25
CLK1-213ENST00000492793 WASF2Q9Y6W5 498 aa7.27□□□□□ -1.25
CLK1-213ENST00000492793 ESPNB1AK53 854 aa7.26□□□□□ -1.25
CLK1-213ENST00000492793 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
CLK1-213ENST00000492793 PDE4CQ08493 712 aa7.26□□□□□ -1.25
CLK1-213ENST00000492793 USP4Q13107 963 aa7.26□□□□□ -1.25
CLK1-213ENST00000492793 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
CLK1-213ENST00000492793 TRAF7Q6Q0C0 670 aa7.26□□□□□ -1.25
CLK1-213ENST00000492793 TRIM50Q86XT4 487 aa7.26□□□□□ -1.25
CLK1-213ENST00000492793 ZNF594Q96JF6 807 aaPredicted RBP7.26□□□□□ -1.25
CLK1-213ENST00000492793 TTC24A2A3L6 582 aaPredicted RBP7.25□□□□□ -1.25
CLK1-213ENST00000492793 ATG7O95352 703 aa7.25□□□□□ -1.25
CLK1-213ENST00000492793 ATP1A2P50993 1020 aa7.25□□□□□ -1.25
CLK1-213ENST00000492793 SRPK2P78362 688 aaKnown RBP7.25□□□□□ -1.25
CLK1-213ENST00000492793 DHX9Q08211 1270 aaKnown RBP7.25□□□□□ -1.25
CLK1-213ENST00000492793 OGFOD1Q8N543 542 aa7.25□□□□□ -1.25
CLK1-213ENST00000492793 CDK15Q96Q40 435 aa7.25□□□□□ -1.25
CLK1-213ENST00000492793 NOVA2Q9UNW9 492 aaKnown RBP7.25□□□□□ -1.25
CLK1-213ENST00000492793 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L10C9JJH3 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L21D6R901 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 SIAH2O43255 324 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 ADH1CP00326 375 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 GTF2IP78347 998 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 CRTC2Q53ET0 693 aaPredicted RBP7.24□□□□□ -1.25
CLK1-213ENST00000492793 CCDC125Q86Z20 511 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 TRIM52Q96A61 297 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 CYLDQ9NQC7 956 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 TMPRSS4Q9NRS4 437 aa7.24□□□□□ -1.25
CLK1-213ENST00000492793 DNAAF2Q9NVR5 837 aaKnown RBP7.24□□□□□ -1.25
CLK1-213ENST00000492793 V9GY48 417 aaPredicted RBP7.24□□□□□ -1.25
CLK1-213ENST00000492793 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
CLK1-213ENST00000492793 TNFRSF10AO00220 468 aa7.23□□□□□ -1.25
CLK1-213ENST00000492793 GRM5P41594 1212 aa7.23□□□□□ -1.25
CLK1-213ENST00000492793 NR5A1Q13285 461 aa7.23□□□□□ -1.25
CLK1-213ENST00000492793 AEBP1Q8IUX7 1158 aa7.23□□□□□ -1.25
CLK1-213ENST00000492793 CYP4X1Q8N118 509 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms