RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CPSF1Q10570 1443 aaKnown RBP15.93■□□□□ 0.14
SND1-215ENST00000492772 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
SND1-215ENST00000492772 PLSCR1O15162 318 aa15.92■□□□□ 0.14
SND1-215ENST00000492772 BCL9O00512 1426 aa15.92■□□□□ 0.14
SND1-215ENST00000492772 TOM1L2Q6ZVM7 507 aa15.91■□□□□ 0.14
SND1-215ENST00000492772 CDCA7Q9BWT1 371 aaPredicted RBP15.91■□□□□ 0.14
SND1-215ENST00000492772 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
SND1-215ENST00000492772 ABCC6O95255 1503 aa15.9■□□□□ 0.14
SND1-215ENST00000492772 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
SND1-215ENST00000492772 CABP1Q9NZU7 370 aa15.9■□□□□ 0.14
SND1-215ENST00000492772 RGPD5Q99666 1765 aa15.89■□□□□ 0.13
SND1-215ENST00000492772 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
SND1-215ENST00000492772 MYOM1P52179 1685 aa15.87■□□□□ 0.13
SND1-215ENST00000492772 KCNH5Q8NCM2 988 aa15.87■□□□□ 0.13
SND1-215ENST00000492772 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
SND1-215ENST00000492772 NFAT5O94916 1531 aa15.86■□□□□ 0.13
SND1-215ENST00000492772 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
SND1-215ENST00000492772 ARHGEF25Q86VW2 580 aa15.85■□□□□ 0.13
SND1-215ENST00000492772 MARCH10Q8NA82 808 aaPredicted RBP15.85■□□□□ 0.13
SND1-215ENST00000492772 AXIN2Q9Y2T1 843 aa15.85■□□□□ 0.13
SND1-215ENST00000492772 TTC21AQ8NDW8 1320 aa15.85■□□□□ 0.13
SND1-215ENST00000492772 CCDC7Q96M83 1385 aa15.85■□□□□ 0.13
SND1-215ENST00000492772 MON2Q7Z3U7 1717 aa15.85■□□□□ 0.13
SND1-215ENST00000492772 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
SND1-215ENST00000492772 USP54Q70EL1 1684 aa15.84■□□□□ 0.13
SND1-215ENST00000492772 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
SND1-215ENST00000492772 CARD10Q9BWT7 1032 aa15.84■□□□□ 0.13
SND1-215ENST00000492772 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
SND1-215ENST00000492772 CSB-PGBD3P0DP91 1061 aa15.83■□□□□ 0.12
SND1-215ENST00000492772 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
SND1-215ENST00000492772 STK32BQ9NY57 414 aa15.82■□□□□ 0.12
SND1-215ENST00000492772 ROCK2O75116 1388 aaKnown RBP15.8■□□□□ 0.12
SND1-215ENST00000492772 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
SND1-215ENST00000492772 EXOC5O00471 708 aa15.8■□□□□ 0.12
SND1-215ENST00000492772 TXNRD1Q16881 649 aa15.8■□□□□ 0.12
SND1-215ENST00000492772 PROM2Q8N271 834 aa15.8■□□□□ 0.12
SND1-215ENST00000492772 LTN1O94822 1766 aa15.8■□□□□ 0.12
SND1-215ENST00000492772 PAPPAQ13219 1627 aa15.79■□□□□ 0.12
SND1-215ENST00000492772 SOX12O15370 315 aa15.79■□□□□ 0.12
SND1-215ENST00000492772 ZBTB7AO95365 584 aa15.79■□□□□ 0.12
SND1-215ENST00000492772 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
SND1-215ENST00000492772 PTGER2P43116 358 aa15.78■□□□□ 0.12
SND1-215ENST00000492772 SLC15A2Q16348 729 aa15.78■□□□□ 0.12
SND1-215ENST00000492772 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
SND1-215ENST00000492772 BTAF1O14981 1849 aa15.77■□□□□ 0.11
SND1-215ENST00000492772 SBNO2Q9Y2G9 1366 aa15.76■□□□□ 0.11
SND1-215ENST00000492772 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
SND1-215ENST00000492772 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
SND1-215ENST00000492772 ERBB3P21860 1342 aa15.75■□□□□ 0.11
SND1-215ENST00000492772 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
SND1-215ENST00000492772 FAM208AQ9UK61 1670 aaKnown RBP15.75■□□□□ 0.11
SND1-215ENST00000492772 CHD4Q14839 1912 aa15.74■□□□□ 0.11
SND1-215ENST00000492772 FHDC1Q9C0D6 1143 aaPredicted RBP15.73■□□□□ 0.11
SND1-215ENST00000492772 QSER1Q2KHR3 1735 aa15.73■□□□□ 0.11
SND1-215ENST00000492772 IL2RBP14784 551 aa15.72■□□□□ 0.11
SND1-215ENST00000492772 SGIP1Q9BQI5 828 aa15.72■□□□□ 0.11
SND1-215ENST00000492772 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
SND1-215ENST00000492772 NLRP2Q9NX02 1062 aa15.72■□□□□ 0.11
SND1-215ENST00000492772 MAP3K5Q99683 1374 aa15.72■□□□□ 0.11
SND1-215ENST00000492772 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
SND1-215ENST00000492772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.71■□□□□ 0.11
SND1-215ENST00000492772 EDC4Q6P2E9 1401 aaKnown RBP15.7■□□□□ 0.1
SND1-215ENST00000492772 ZNF784Q8NCA9 323 aaPredicted RBP15.7■□□□□ 0.1
SND1-215ENST00000492772 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
SND1-215ENST00000492772 ARXQ96QS3 562 aa15.69■□□□□ 0.1
SND1-215ENST00000492772 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
SND1-215ENST00000492772 NME9Q86XW9 330 aa15.68■□□□□ 0.1
SND1-215ENST00000492772 ANKRD24Q8TF21 1146 aa15.68■□□□□ 0.1
SND1-215ENST00000492772 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
SND1-215ENST00000492772 COL24A1Q17RW2 1714 aa15.68■□□□□ 0.1
SND1-215ENST00000492772 UTRNP46939 3433 aa15.68■□□□□ 0.1
SND1-215ENST00000492772 ZNF827Q17R98 1081 aa15.66■□□□□ 0.1
SND1-215ENST00000492772 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
SND1-215ENST00000492772 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
SND1-215ENST00000492772 KAT6BQ8WYB5 2073 aa15.65■□□□□ 0.1
SND1-215ENST00000492772 NEUROD1Q13562 356 aa15.65■□□□□ 0.1
SND1-215ENST00000492772 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
SND1-215ENST00000492772 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
SND1-215ENST00000492772 LY75O60449 1722 aa15.64■□□□□ 0.09
SND1-215ENST00000492772 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
SND1-215ENST00000492772 SLC16A10Q8TF71 515 aa15.64■□□□□ 0.09
SND1-215ENST00000492772 TERF2IPQ9NYB0 399 aa15.64■□□□□ 0.09
SND1-215ENST00000492772 CARD11Q9BXL7 1154 aa15.63■□□□□ 0.09
SND1-215ENST00000492772 LRRC4BQ9NT99 713 aa15.63■□□□□ 0.09
SND1-215ENST00000492772 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
SND1-215ENST00000492772 POLD1P28340 1107 aa15.62■□□□□ 0.09
SND1-215ENST00000492772 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
SND1-215ENST00000492772 IP6K1Q92551 441 aa15.61■□□□□ 0.09
SND1-215ENST00000492772 PUS7Q96PZ0 661 aaKnown RBP15.61■□□□□ 0.09
SND1-215ENST00000492772 ANKRD36BQ8N2N9 1353 aa15.61■□□□□ 0.09
SND1-215ENST00000492772 GPR162Q16538 588 aa15.6■□□□□ 0.09
SND1-215ENST00000492772 SLC12A5Q9H2X9 1139 aa15.6■□□□□ 0.09
SND1-215ENST00000492772 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
SND1-215ENST00000492772 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
SND1-215ENST00000492772 RGPD2P0DJD1 1756 aa15.58■□□□□ 0.08
SND1-215ENST00000492772 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
SND1-215ENST00000492772 C1QTNF8P60827 252 aa15.57■□□□□ 0.08
SND1-215ENST00000492772 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
SND1-215ENST00000492772 SYTL4Q96C24 671 aaPredicted RBP15.57■□□□□ 0.08
SND1-215ENST00000492772 LTV1Q96GA3 475 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms