RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 TOPAZ1Q8N9V7 1692 aa8.25□□□□□ -1.09
SEC13-219ENST00000492602 PRAM1Q96QH2 718 aa8.25□□□□□ -1.09
SEC13-219ENST00000492602 BCL9O00512 1426 aa8.25□□□□□ -1.09
SEC13-219ENST00000492602 CRB1P82279 1406 aa8.25□□□□□ -1.09
SEC13-219ENST00000492602 LRRC37A3O60309 1634 aa8.25□□□□□ -1.09
SEC13-219ENST00000492602 KNDC1Q76NI1 1749 aa8.24□□□□□ -1.09
SEC13-219ENST00000492602 TNS2Q63HR2 1409 aa8.24□□□□□ -1.09
SEC13-219ENST00000492602 TOM1L2Q6ZVM7 507 aa8.24□□□□□ -1.09
SEC13-219ENST00000492602 C16orf71Q8IYS4 520 aaPredicted RBP8.24□□□□□ -1.09
SEC13-219ENST00000492602 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
SEC13-219ENST00000492602 ACSBG1Q96GR2 724 aa8.24□□□□□ -1.09
SEC13-219ENST00000492602 PNPLA7Q6ZV29 1317 aa8.24□□□□□ -1.09
SEC13-219ENST00000492602 PHRF1Q9P1Y6 1649 aaKnown RBP8.23□□□□□ -1.09
SEC13-219ENST00000492602 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 AKT1S1Q96B36 256 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 HIRIP3Q9BW71 556 aaPredicted RBP8.23□□□□□ -1.09
SEC13-219ENST00000492602 NMRK2Q9NPI5 230 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 TFCP2L1Q9NZI6 479 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 POGKQ9P215 609 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 COL5A2P05997 1499 aaPredicted RBP8.23□□□□□ -1.09
SEC13-219ENST00000492602 PRR36Q9H6K5 1346 aa8.23□□□□□ -1.09
SEC13-219ENST00000492602 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
SEC13-219ENST00000492602 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
SEC13-219ENST00000492602 PPLO60437 1756 aa8.22□□□□□ -1.09
SEC13-219ENST00000492602 PAPPAQ13219 1627 aa8.22□□□□□ -1.09
SEC13-219ENST00000492602 MSH5O43196 834 aa8.22□□□□□ -1.09
SEC13-219ENST00000492602 CPDO75976 1380 aa8.22□□□□□ -1.09
SEC13-219ENST00000492602 TULP4Q9NRJ4 1543 aa8.21□□□□□ -1.1
SEC13-219ENST00000492602 EXOC5O00471 708 aa8.21□□□□□ -1.1
SEC13-219ENST00000492602 FSTL1Q12841 308 aa8.21□□□□□ -1.1
SEC13-219ENST00000492602 RGL3Q3MIN7 710 aa8.21□□□□□ -1.1
SEC13-219ENST00000492602 CDCA7Q9BWT1 371 aaPredicted RBP8.21□□□□□ -1.1
SEC13-219ENST00000492602 CD2APQ9Y5K6 639 aa8.21□□□□□ -1.1
SEC13-219ENST00000492602 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.1
SEC13-219ENST00000492602 ARHGEF28Q8N1W1 1705 aaKnown RBP8.2□□□□□ -1.1
SEC13-219ENST00000492602 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
SEC13-219ENST00000492602 ABTB2Q8N961 1025 aa8.2□□□□□ -1.1
SEC13-219ENST00000492602 BRD4O60885 1362 aaPredicted RBP8.2□□□□□ -1.1
SEC13-219ENST00000492602 GCP02774 474 aa8.19□□□□□ -1.1
SEC13-219ENST00000492602 ITGAEP38570 1179 aa8.19□□□□□ -1.1
SEC13-219ENST00000492602 MLLT1Q03111 559 aaPredicted RBP8.19□□□□□ -1.1
SEC13-219ENST00000492602 COL24A1Q17RW2 1714 aa8.19□□□□□ -1.1
SEC13-219ENST00000492602 EIF3AQ14152 1382 aaKnown RBP8.19□□□□□ -1.1
SEC13-219ENST00000492602 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
SEC13-219ENST00000492602 MINK1Q8N4C8 1332 aaPredicted RBP8.18□□□□□ -1.1
SEC13-219ENST00000492602 IGSF1Q8N6C5 1336 aa8.18□□□□□ -1.1
SEC13-219ENST00000492602 WASLO00401 505 aaPredicted RBP8.17□□□□□ -1.1
SEC13-219ENST00000492602 KCNQ4P56696 695 aa8.17□□□□□ -1.1
SEC13-219ENST00000492602 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
SEC13-219ENST00000492602 PIK3C2GO75747 1445 aa8.17□□□□□ -1.1
SEC13-219ENST00000492602 USP6P35125 1406 aa8.17□□□□□ -1.1
SEC13-219ENST00000492602 USP19O94966 1318 aa8.16□□□□□ -1.1
SEC13-219ENST00000492602 CFAP70Q5T0N1 1121 aa8.16□□□□□ -1.1
SEC13-219ENST00000492602 NLRP13Q86W25 1043 aa8.16□□□□□ -1.1
SEC13-219ENST00000492602 COL23A1Q86Y22 540 aaPredicted RBP8.16□□□□□ -1.1
SEC13-219ENST00000492602 WDR17Q8IZU2 1322 aa8.16□□□□□ -1.1
SEC13-219ENST00000492602 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
SEC13-219ENST00000492602 NHSQ6T4R5 1651 aa8.15□□□□□ -1.1
SEC13-219ENST00000492602 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
SEC13-219ENST00000492602 QSER1Q2KHR3 1735 aa8.15□□□□□ -1.11
SEC13-219ENST00000492602 SMC1BQ8NDV3 1235 aa8.14□□□□□ -1.11
SEC13-219ENST00000492602 NUDT16Q96DE0 195 aaKnown RBP8.14□□□□□ -1.11
SEC13-219ENST00000492602 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
SEC13-219ENST00000492602 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
SEC13-219ENST00000492602 TRAK1Q9UPV9 953 aa8.14□□□□□ -1.11
SEC13-219ENST00000492602 AXIN2Q9Y2T1 843 aa8.14□□□□□ -1.11
SEC13-219ENST00000492602 ACEP12821 1306 aa8.13□□□□□ -1.11
SEC13-219ENST00000492602 FOXN1O15353 648 aa8.13□□□□□ -1.11
SEC13-219ENST00000492602 CARD10Q9BWT7 1032 aa8.13□□□□□ -1.11
SEC13-219ENST00000492602 RRAGCQ9HB90 399 aa8.13□□□□□ -1.11
SEC13-219ENST00000492602 CCDC85CA6NKD9 419 aa8.12□□□□□ -1.11
SEC13-219ENST00000492602 ARHGAP27Q6ZUM4 889 aa8.12□□□□□ -1.11
SEC13-219ENST00000492602 BTAF1O14981 1849 aa8.12□□□□□ -1.11
SEC13-219ENST00000492602 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
SEC13-219ENST00000492602 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
SEC13-219ENST00000492602 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
SEC13-219ENST00000492602 SLC4A1APQ9BWU0 796 aaKnown RBP8.11□□□□□ -1.11
SEC13-219ENST00000492602 CTCFP49711 727 aaPredicted RBP8.1□□□□□ -1.11
SEC13-219ENST00000492602 RGS19P49795 217 aa8.1□□□□□ -1.11
SEC13-219ENST00000492602 C9orf131Q5VYM1 1079 aa8.1□□□□□ -1.11
SEC13-219ENST00000492602 AIDAQ96BJ3 306 aa8.1□□□□□ -1.11
SEC13-219ENST00000492602 SYTL4Q96C24 671 aaPredicted RBP8.1□□□□□ -1.11
SEC13-219ENST00000492602 CCNL1Q9UK58 526 aaPredicted RBP8.1□□□□□ -1.11
SEC13-219ENST00000492602 BCS1LQ9Y276 419 aa8.1□□□□□ -1.11
SEC13-219ENST00000492602 KAT6BQ8WYB5 2073 aa8.1□□□□□ -1.11
SEC13-219ENST00000492602 CICQ96RK0 1608 aaPredicted RBP8.1□□□□□ -1.11
SEC13-219ENST00000492602 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
SEC13-219ENST00000492602 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
SEC13-219ENST00000492602 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
SEC13-219ENST00000492602 NLRP6P59044 892 aa8.09□□□□□ -1.11
SEC13-219ENST00000492602 MKRN1Q9UHC7 482 aaKnown RBP8.09□□□□□ -1.11
SEC13-219ENST00000492602 TRPM1Q7Z4N2 1603 aa8.09□□□□□ -1.11
SEC13-219ENST00000492602 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
SEC13-219ENST00000492602 SPATA31E1Q6ZUB1 1445 aa8.09□□□□□ -1.11
SEC13-219ENST00000492602 PLEKHG2Q9H7P9 1386 aa8.09□□□□□ -1.12
SEC13-219ENST00000492602 LOC105371045A0A1W2PR82 267 aa8.08□□□□□ -1.12
SEC13-219ENST00000492602 LBX1P52954 281 aa8.08□□□□□ -1.12
SEC13-219ENST00000492602 CCDC61Q9Y6R9 512 aa8.08□□□□□ -1.12
SEC13-219ENST00000492602 KIAA1210Q9ULL0 1709 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms