RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 NFAT5O94916 1531 aa20.71■□□□□ 0.91
SS18L1-205ENST00000492466 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
SS18L1-205ENST00000492466 RREB1Q92766 1687 aa20.7■□□□□ 0.91
SS18L1-205ENST00000492466 CD163L1Q9NR16 1453 aa20.7■□□□□ 0.9
SS18L1-205ENST00000492466 KCNH5Q8NCM2 988 aa20.7■□□□□ 0.9
SS18L1-205ENST00000492466 KTN1Q86UP2 1357 aaKnown RBP20.7■□□□□ 0.9
SS18L1-205ENST00000492466 LRRC37A3O60309 1634 aa20.69■□□□□ 0.9
SS18L1-205ENST00000492466 TOM1L2Q6ZVM7 507 aa20.69■□□□□ 0.9
SS18L1-205ENST00000492466 TIMELESSQ9UNS1 1208 aa20.69■□□□□ 0.9
SS18L1-205ENST00000492466 MON2Q7Z3U7 1717 aa20.69■□□□□ 0.9
SS18L1-205ENST00000492466 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
SS18L1-205ENST00000492466 NUP188Q5SRE5 1749 aa20.67■□□□□ 0.9
SS18L1-205ENST00000492466 SOX12O15370 315 aa20.66■□□□□ 0.9
SS18L1-205ENST00000492466 DDB1Q16531 1140 aa20.66■□□□□ 0.9
SS18L1-205ENST00000492466 USP31Q70CQ4 1352 aa20.66■□□□□ 0.9
SS18L1-205ENST00000492466 OVOS2A0A0G2JMS6 1433 aa20.66■□□□□ 0.9
SS18L1-205ENST00000492466 OVOS2A0A0J9YW53 1432 aa20.66■□□□□ 0.9
SS18L1-205ENST00000492466 OVOS2Q6IE36 1432 aa20.66■□□□□ 0.9
SS18L1-205ENST00000492466 SBF2Q86WG5 1849 aa20.65■□□□□ 0.9
SS18L1-205ENST00000492466 WNK3Q9BYP7 1800 aa20.65■□□□□ 0.9
SS18L1-205ENST00000492466 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
SS18L1-205ENST00000492466 PTF1AQ7RTS3 328 aa20.65■□□□□ 0.9
SS18L1-205ENST00000492466 CARD10Q9BWT7 1032 aa20.65■□□□□ 0.9
SS18L1-205ENST00000492466 MARCH10Q8NA82 808 aaPredicted RBP20.64■□□□□ 0.89
SS18L1-205ENST00000492466 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
SS18L1-205ENST00000492466 USP54Q70EL1 1684 aa20.64■□□□□ 0.89
SS18L1-205ENST00000492466 NME9Q86XW9 330 aa20.63■□□□□ 0.89
SS18L1-205ENST00000492466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
SS18L1-205ENST00000492466 BCL9O00512 1426 aa20.62■□□□□ 0.89
SS18L1-205ENST00000492466 CDCA7Q9BWT1 371 aaPredicted RBP20.62■□□□□ 0.89
SS18L1-205ENST00000492466 ABCC6O95255 1503 aa20.62■□□□□ 0.89
SS18L1-205ENST00000492466 PLSCR1O15162 318 aa20.61■□□□□ 0.89
SS18L1-205ENST00000492466 USP47Q96K76 1375 aa20.6■□□□□ 0.89
SS18L1-205ENST00000492466 PUS7Q96PZ0 661 aaKnown RBP20.6■□□□□ 0.89
SS18L1-205ENST00000492466 TESK2Q96S53 571 aa20.6■□□□□ 0.89
SS18L1-205ENST00000492466 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
SS18L1-205ENST00000492466 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
SS18L1-205ENST00000492466 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
SS18L1-205ENST00000492466 PROM2Q8N271 834 aa20.58■□□□□ 0.89
SS18L1-205ENST00000492466 RGPD3A6NKT7 1758 aaPredicted RBP20.58■□□□□ 0.89
SS18L1-205ENST00000492466 RGPD4Q7Z3J3 1758 aa20.58■□□□□ 0.89
SS18L1-205ENST00000492466 EDC4Q6P2E9 1401 aaKnown RBP20.58■□□□□ 0.88
SS18L1-205ENST00000492466 A0A1W2PP64 1363 aa20.58■□□□□ 0.88
SS18L1-205ENST00000492466 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
SS18L1-205ENST00000492466 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
SS18L1-205ENST00000492466 ERBB3P21860 1342 aa20.56■□□□□ 0.88
SS18L1-205ENST00000492466 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
SS18L1-205ENST00000492466 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
SS18L1-205ENST00000492466 EXOC5O00471 708 aa20.54■□□□□ 0.88
SS18L1-205ENST00000492466 ANO8Q9HCE9 1232 aaPredicted RBP20.54■□□□□ 0.88
SS18L1-205ENST00000492466 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
SS18L1-205ENST00000492466 LTN1O94822 1766 aa20.54■□□□□ 0.88
SS18L1-205ENST00000492466 TNS2Q63HR2 1409 aa20.53■□□□□ 0.88
SS18L1-205ENST00000492466 UTRNP46939 3433 aa20.5■□□□□ 0.87
SS18L1-205ENST00000492466 KCNQ2O43526 872 aa20.5■□□□□ 0.87
SS18L1-205ENST00000492466 SLC24A1O60721 1099 aa20.5■□□□□ 0.87
SS18L1-205ENST00000492466 ANKRD24Q8TF21 1146 aa20.5■□□□□ 0.87
SS18L1-205ENST00000492466 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
SS18L1-205ENST00000492466 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
SS18L1-205ENST00000492466 PDGFDQ9GZP0 370 aaPredicted RBP20.48■□□□□ 0.87
SS18L1-205ENST00000492466 IL2RBP14784 551 aa20.47■□□□□ 0.87
SS18L1-205ENST00000492466 TMF1P82094 1093 aa20.47■□□□□ 0.87
SS18L1-205ENST00000492466 TXNRD1Q16881 649 aa20.47■□□□□ 0.87
SS18L1-205ENST00000492466 IP6K1Q92551 441 aa20.47■□□□□ 0.87
SS18L1-205ENST00000492466 CASZ1Q86V15 1759 aa20.46■□□□□ 0.87
SS18L1-205ENST00000492466 SPON1Q9HCB6 807 aa20.46■□□□□ 0.87
SS18L1-205ENST00000492466 FBLN1P23142 703 aa20.45■□□□□ 0.86
SS18L1-205ENST00000492466 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
SS18L1-205ENST00000492466 MAP3K19Q56UN5 1328 aa20.43■□□□□ 0.86
SS18L1-205ENST00000492466 EIF4G2P78344 907 aaKnown RBP eCLIP20.42■□□□□ 0.86
SS18L1-205ENST00000492466 ACSBG1Q96GR2 724 aa20.42■□□□□ 0.86
SS18L1-205ENST00000492466 ANKRD36BQ8N2N9 1353 aa20.42■□□□□ 0.86
SS18L1-205ENST00000492466 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
SS18L1-205ENST00000492466 COG3Q96JB2 828 aa20.41■□□□□ 0.86
SS18L1-205ENST00000492466 HOXC9P31274 260 aa20.4■□□□□ 0.86
SS18L1-205ENST00000492466 SLC15A2Q16348 729 aa20.4■□□□□ 0.86
SS18L1-205ENST00000492466 POLR3GLQ9BT43 218 aa20.4■□□□□ 0.86
SS18L1-205ENST00000492466 FYB1O15117 783 aa20.39■□□□□ 0.85
SS18L1-205ENST00000492466 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
SS18L1-205ENST00000492466 MYOM1P52179 1685 aa20.38■□□□□ 0.85
SS18L1-205ENST00000492466 PTGER2P43116 358 aa20.38■□□□□ 0.85
SS18L1-205ENST00000492466 FAM208AQ9UK61 1670 aaKnown RBP20.38■□□□□ 0.85
SS18L1-205ENST00000492466 BTAF1O14981 1849 aa20.37■□□□□ 0.85
SS18L1-205ENST00000492466 ZBTB7AO95365 584 aa20.37■□□□□ 0.85
SS18L1-205ENST00000492466 PAPPAQ13219 1627 aa20.37■□□□□ 0.85
SS18L1-205ENST00000492466 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
SS18L1-205ENST00000492466 STK32BQ9NY57 414 aa20.36■□□□□ 0.85
SS18L1-205ENST00000492466 PPP1R1BQ9UD71 204 aaPredicted RBP20.36■□□□□ 0.85
SS18L1-205ENST00000492466 GGNBP2Q9H3C7 697 aa20.35■□□□□ 0.85
SS18L1-205ENST00000492466 LRRC4BQ9NT99 713 aa20.35■□□□□ 0.85
SS18L1-205ENST00000492466 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
SS18L1-205ENST00000492466 AMPHP49418 695 aa20.34■□□□□ 0.85
SS18L1-205ENST00000492466 RRS1Q15050 365 aaKnown RBP20.34■□□□□ 0.85
SS18L1-205ENST00000492466 DDX54Q8TDD1 881 aaKnown RBP20.34■□□□□ 0.85
SS18L1-205ENST00000492466 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
SS18L1-205ENST00000492466 KIF20BQ96Q89 1820 aa20.34■□□□□ 0.85
SS18L1-205ENST00000492466 KAT6BQ8WYB5 2073 aa20.33■□□□□ 0.85
SS18L1-205ENST00000492466 SGIP1Q9BQI5 828 aa20.33■□□□□ 0.85
SS18L1-205ENST00000492466 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
SS18L1-205ENST00000492466 NBPF6Q5VWK0 638 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms