RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
MDC1-207ENST00000492462 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
MDC1-207ENST00000492462 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
MDC1-207ENST00000492462 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
MDC1-207ENST00000492462 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
MDC1-207ENST00000492462 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
MDC1-207ENST00000492462 TMF1P82094 1093 aa16.54■□□□□ 0.24
MDC1-207ENST00000492462 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
MDC1-207ENST00000492462 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
MDC1-207ENST00000492462 LTN1O94822 1766 aa16.53■□□□□ 0.24
MDC1-207ENST00000492462 CRB1P82279 1406 aa16.53■□□□□ 0.24
MDC1-207ENST00000492462 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.24
MDC1-207ENST00000492462 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
MDC1-207ENST00000492462 OVOS2A0A0J9YW53 1432 aa16.52■□□□□ 0.23
MDC1-207ENST00000492462 OVOS2Q6IE36 1432 aa16.52■□□□□ 0.23
MDC1-207ENST00000492462 WDR17Q8IZU2 1322 aa16.5■□□□□ 0.23
MDC1-207ENST00000492462 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
MDC1-207ENST00000492462 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
MDC1-207ENST00000492462 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
MDC1-207ENST00000492462 MYOM1P52179 1685 aa16.5■□□□□ 0.23
MDC1-207ENST00000492462 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
MDC1-207ENST00000492462 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
MDC1-207ENST00000492462 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
MDC1-207ENST00000492462 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
MDC1-207ENST00000492462 FBLN1P23142 703 aa16.48■□□□□ 0.23
MDC1-207ENST00000492462 CSB-PGBD3P0DP91 1061 aa16.47■□□□□ 0.23
MDC1-207ENST00000492462 PDE3BQ13370 1112 aa16.47■□□□□ 0.23
MDC1-207ENST00000492462 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
MDC1-207ENST00000492462 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
MDC1-207ENST00000492462 ABCC6O95255 1503 aa16.46■□□□□ 0.23
MDC1-207ENST00000492462 TRIM37O94972 964 aa16.45■□□□□ 0.22
MDC1-207ENST00000492462 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
MDC1-207ENST00000492462 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
MDC1-207ENST00000492462 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
MDC1-207ENST00000492462 CARD10Q9BWT7 1032 aa16.45■□□□□ 0.22
MDC1-207ENST00000492462 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
MDC1-207ENST00000492462 FYB1O15117 783 aa16.44■□□□□ 0.22
MDC1-207ENST00000492462 BAG6P46379 1132 aa16.44■□□□□ 0.22
MDC1-207ENST00000492462 EN1Q05925 392 aaPredicted RBP16.44■□□□□ 0.22
MDC1-207ENST00000492462 COG3Q96JB2 828 aa16.44■□□□□ 0.22
MDC1-207ENST00000492462 CARD14Q9BXL6 1004 aa16.44■□□□□ 0.22
MDC1-207ENST00000492462 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
MDC1-207ENST00000492462 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
MDC1-207ENST00000492462 DISP2A7MBM2 1401 aa16.43■□□□□ 0.22
MDC1-207ENST00000492462 ERBB3P21860 1342 aa16.43■□□□□ 0.22
MDC1-207ENST00000492462 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
MDC1-207ENST00000492462 DDB1Q16531 1140 aa16.42■□□□□ 0.22
MDC1-207ENST00000492462 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
MDC1-207ENST00000492462 ANKRD24Q8TF21 1146 aa16.42■□□□□ 0.22
MDC1-207ENST00000492462 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
MDC1-207ENST00000492462 CEP350Q5VT06 3117 aa16.42■□□□□ 0.22
MDC1-207ENST00000492462 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
MDC1-207ENST00000492462 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
MDC1-207ENST00000492462 IP6K1Q92551 441 aa16.41■□□□□ 0.22
MDC1-207ENST00000492462 NLRP2Q9NX02 1062 aa16.41■□□□□ 0.22
MDC1-207ENST00000492462 NSD3Q9BZ95 1437 aa16.4■□□□□ 0.22
MDC1-207ENST00000492462 C1QTNF8P60827 252 aa16.4■□□□□ 0.22
MDC1-207ENST00000492462 LTV1Q96GA3 475 aaPredicted RBP16.4■□□□□ 0.22
MDC1-207ENST00000492462 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
MDC1-207ENST00000492462 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
MDC1-207ENST00000492462 RGPD2P0DJD1 1756 aa16.39■□□□□ 0.21
MDC1-207ENST00000492462 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
MDC1-207ENST00000492462 MARCH10Q8NA82 808 aaPredicted RBP16.39■□□□□ 0.21
MDC1-207ENST00000492462 HOXC9P31274 260 aa16.38■□□□□ 0.21
MDC1-207ENST00000492462 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
MDC1-207ENST00000492462 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
MDC1-207ENST00000492462 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
MDC1-207ENST00000492462 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
MDC1-207ENST00000492462 APBA3O96018 575 aa16.37■□□□□ 0.21
MDC1-207ENST00000492462 PTF1AQ7RTS3 328 aa16.37■□□□□ 0.21
MDC1-207ENST00000492462 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
MDC1-207ENST00000492462 UTRNP46939 3433 aa16.36■□□□□ 0.21
MDC1-207ENST00000492462 AMPHP49418 695 aa16.36■□□□□ 0.21
MDC1-207ENST00000492462 EXOC5O00471 708 aa16.35■□□□□ 0.21
MDC1-207ENST00000492462 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
MDC1-207ENST00000492462 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
MDC1-207ENST00000492462 IL2RBP14784 551 aa16.33■□□□□ 0.2
MDC1-207ENST00000492462 RREB1Q92766 1687 aa16.33■□□□□ 0.2
MDC1-207ENST00000492462 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
MDC1-207ENST00000492462 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
MDC1-207ENST00000492462 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
MDC1-207ENST00000492462 PANK3Q9H999 370 aa16.31■□□□□ 0.2
MDC1-207ENST00000492462 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
MDC1-207ENST00000492462 BCL9O00512 1426 aa16.3■□□□□ 0.2
MDC1-207ENST00000492462 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
MDC1-207ENST00000492462 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
MDC1-207ENST00000492462 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
MDC1-207ENST00000492462 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
MDC1-207ENST00000492462 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
MDC1-207ENST00000492462 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
MDC1-207ENST00000492462 BCL11BQ9C0K0 894 aaPredicted RBP16.29■□□□□ 0.2
MDC1-207ENST00000492462 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
MDC1-207ENST00000492462 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
MDC1-207ENST00000492462 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
MDC1-207ENST00000492462 KCNQ2O43526 872 aa16.28■□□□□ 0.2
MDC1-207ENST00000492462 MEGF6O75095 1541 aa16.28■□□□□ 0.2
MDC1-207ENST00000492462 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
MDC1-207ENST00000492462 INSRP06213 1382 aa16.27■□□□□ 0.2
MDC1-207ENST00000492462 FLT4P35916 1363 aa16.27■□□□□ 0.2
MDC1-207ENST00000492462 ACSBG1Q96GR2 724 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms