RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 RGPD5Q99666 1765 aa19.94■□□□□ 0.78
COPS7B-222ENST00000492423 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
COPS7B-222ENST00000492423 SOX12O15370 315 aa19.93■□□□□ 0.78
COPS7B-222ENST00000492423 COL18A1P39060 1754 aa19.93■□□□□ 0.78
COPS7B-222ENST00000492423 TOM1O60784 492 aa19.92■□□□□ 0.78
COPS7B-222ENST00000492423 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
COPS7B-222ENST00000492423 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
COPS7B-222ENST00000492423 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
COPS7B-222ENST00000492423 ADAMTS8Q9UP79 889 aa19.91■□□□□ 0.78
COPS7B-222ENST00000492423 RTL1A6NKG5 1358 aa19.91■□□□□ 0.78
COPS7B-222ENST00000492423 FLT4P35916 1363 aa19.91■□□□□ 0.78
COPS7B-222ENST00000492423 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
COPS7B-222ENST00000492423 ILDR2Q71H61 639 aa19.9■□□□□ 0.78
COPS7B-222ENST00000492423 KCNH5Q8NCM2 988 aa19.9■□□□□ 0.78
COPS7B-222ENST00000492423 DIAPH1O60610 1272 aaKnown RBP19.89■□□□□ 0.77
COPS7B-222ENST00000492423 SLC4A2P04920 1241 aa19.89■□□□□ 0.77
COPS7B-222ENST00000492423 RGPD2P0DJD1 1756 aa19.89■□□□□ 0.77
COPS7B-222ENST00000492423 ABCC6O95255 1503 aa19.88■□□□□ 0.77
COPS7B-222ENST00000492423 SOCS7O14512 581 aa19.87■□□□□ 0.77
COPS7B-222ENST00000492423 GCP02774 474 aa19.87■□□□□ 0.77
COPS7B-222ENST00000492423 IL13P35225 146 aa19.87■□□□□ 0.77
COPS7B-222ENST00000492423 HNRNPUQ00839 825 aaKnown RBP eCLIP19.87■□□□□ 0.77
COPS7B-222ENST00000492423 CAMTA1Q9Y6Y1 1673 aa19.86■□□□□ 0.77
COPS7B-222ENST00000492423 HOXC9P31274 260 aa19.85■□□□□ 0.77
COPS7B-222ENST00000492423 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
COPS7B-222ENST00000492423 LMO7Q8WWI1 1683 aa19.84■□□□□ 0.77
COPS7B-222ENST00000492423 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
COPS7B-222ENST00000492423 AMPHP49418 695 aa19.84■□□□□ 0.77
COPS7B-222ENST00000492423 EIF4A2Q14240 407 aaKnown RBP19.84■□□□□ 0.77
COPS7B-222ENST00000492423 HSP90AB2PQ58FF8 381 aa19.84■□□□□ 0.77
COPS7B-222ENST00000492423 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
COPS7B-222ENST00000492423 CABLES1Q8TDN4 633 aa19.83■□□□□ 0.77
COPS7B-222ENST00000492423 FAM208AQ9UK61 1670 aaKnown RBP19.82■□□□□ 0.76
COPS7B-222ENST00000492423 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
COPS7B-222ENST00000492423 PIP4K2BP78356 416 aa19.82■□□□□ 0.76
COPS7B-222ENST00000492423 POTEHQ6S545 545 aa19.82■□□□□ 0.76
COPS7B-222ENST00000492423 CPDO75976 1380 aa19.82■□□□□ 0.76
COPS7B-222ENST00000492423 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
COPS7B-222ENST00000492423 HSPA1LP34931 641 aa19.81■□□□□ 0.76
COPS7B-222ENST00000492423 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.76
COPS7B-222ENST00000492423 CCDC146Q8IYE0 955 aa19.81■□□□□ 0.76
COPS7B-222ENST00000492423 IP6K1Q92551 441 aa19.81■□□□□ 0.76
COPS7B-222ENST00000492423 ZBED9Q6R2W3 1325 aa19.8■□□□□ 0.76
COPS7B-222ENST00000492423 LRRC59Q96AG4 307 aaKnown RBP19.8■□□□□ 0.76
COPS7B-222ENST00000492423 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
COPS7B-222ENST00000492423 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
COPS7B-222ENST00000492423 ZC3H6P61129 1189 aaKnown RBP19.78■□□□□ 0.76
COPS7B-222ENST00000492423 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
COPS7B-222ENST00000492423 PLEKHF1Q96S99 279 aa19.77■□□□□ 0.76
COPS7B-222ENST00000492423 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
COPS7B-222ENST00000492423 KIAA0232Q92628 1395 aa19.77■□□□□ 0.76
COPS7B-222ENST00000492423 COL14A1Q05707 1796 aaKnown RBP19.76■□□□□ 0.75
COPS7B-222ENST00000492423 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
COPS7B-222ENST00000492423 NCAPD2Q15021 1401 aa19.76■□□□□ 0.75
COPS7B-222ENST00000492423 IGSF1Q8N6C5 1336 aa19.76■□□□□ 0.75
COPS7B-222ENST00000492423 KDRP35968 1356 aa19.74■□□□□ 0.75
COPS7B-222ENST00000492423 FCHSD2O94868 740 aa19.74■□□□□ 0.75
COPS7B-222ENST00000492423 HMOX1P09601 288 aa19.74■□□□□ 0.75
COPS7B-222ENST00000492423 PLCH1Q4KWH8 1693 aa19.74■□□□□ 0.75
COPS7B-222ENST00000492423 APAF1O14727 1248 aa19.73■□□□□ 0.75
COPS7B-222ENST00000492423 AXIN2Q9Y2T1 843 aa19.73■□□□□ 0.75
COPS7B-222ENST00000492423 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
COPS7B-222ENST00000492423 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
COPS7B-222ENST00000492423 AEBP1Q8IUX7 1158 aa19.72■□□□□ 0.75
COPS7B-222ENST00000492423 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
COPS7B-222ENST00000492423 EYA1Q99502 592 aa19.72■□□□□ 0.75
COPS7B-222ENST00000492423 CHRNA2Q15822 529 aa19.71■□□□□ 0.75
COPS7B-222ENST00000492423 NRAPQ86VF7 1730 aa19.71■□□□□ 0.75
COPS7B-222ENST00000492423 SULT6B1Q6IMI4 303 aa19.7■□□□□ 0.74
COPS7B-222ENST00000492423 TCP11L2Q8N4U5 519 aa19.7■□□□□ 0.74
COPS7B-222ENST00000492423 ANKRD24Q8TF21 1146 aa19.7■□□□□ 0.74
COPS7B-222ENST00000492423 ERBB3P21860 1342 aa19.7■□□□□ 0.74
COPS7B-222ENST00000492423 COL5A2P05997 1499 aaPredicted RBP19.69■□□□□ 0.74
COPS7B-222ENST00000492423 HAP1P54257 671 aaPredicted RBP19.69■□□□□ 0.74
COPS7B-222ENST00000492423 PNNQ9H307 717 aaKnown RBP19.69■□□□□ 0.74
COPS7B-222ENST00000492423 ZNF521Q96K83 1311 aa19.69■□□□□ 0.74
COPS7B-222ENST00000492423 PRDM11Q9NQV5 511 aa19.68■□□□□ 0.74
COPS7B-222ENST00000492423 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
COPS7B-222ENST00000492423 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
COPS7B-222ENST00000492423 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
COPS7B-222ENST00000492423 NWD2Q9ULI1 1742 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 ABCB7O75027 752 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 NBPF6Q5VWK0 638 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 NGEFQ8N5V2 710 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 NBPF4Q96M43 638 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 ZNF219Q9P2Y4 722 aaPredicted RBP19.66■□□□□ 0.74
COPS7B-222ENST00000492423 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
COPS7B-222ENST00000492423 JCADQ9P266 1359 aa19.66■□□□□ 0.74
COPS7B-222ENST00000492423 WNK3Q9BYP7 1800 aa19.65■□□□□ 0.74
COPS7B-222ENST00000492423 TMPOP42166 694 aaKnown RBP19.65■□□□□ 0.74
COPS7B-222ENST00000492423 USHBP1Q8N6Y0 703 aa19.65■□□□□ 0.74
COPS7B-222ENST00000492423 PKD1L3Q7Z443 1732 aa19.63■□□□□ 0.73
COPS7B-222ENST00000492423 PARP4Q9UKK3 1724 aaKnown RBP19.63■□□□□ 0.73
COPS7B-222ENST00000492423 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
COPS7B-222ENST00000492423 NFE2L2Q16236 605 aa19.62■□□□□ 0.73
COPS7B-222ENST00000492423 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
COPS7B-222ENST00000492423 LRRC37A3O60309 1634 aa19.61■□□□□ 0.73
COPS7B-222ENST00000492423 LRP6O75581 1613 aa19.61■□□□□ 0.73
COPS7B-222ENST00000492423 WDR17Q8IZU2 1322 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms