RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 AXIN2Q9Y2T1 843 aa37.97■■■■□ 3.67
SH3GL3-204ENST00000492099 CDCA8Q53HL2 280 aa37.96■■■■□ 3.67
SH3GL3-204ENST00000492099 NFAT5O94916 1531 aa37.95■■■■□ 3.67
SH3GL3-204ENST00000492099 COL18A1P39060 1754 aa37.95■■■■□ 3.67
SH3GL3-204ENST00000492099 USP54Q70EL1 1684 aa37.93■■■■□ 3.66
SH3GL3-204ENST00000492099 FAM182BQ5T319 152 aa37.92■■■■□ 3.66
SH3GL3-204ENST00000492099 TOM1L2Q6ZVM7 507 aa37.92■■■■□ 3.66
SH3GL3-204ENST00000492099 WDR17Q8IZU2 1322 aa37.91■■■■□ 3.66
SH3GL3-204ENST00000492099 PDE3BQ13370 1112 aa37.9■■■■□ 3.66
SH3GL3-204ENST00000492099 ANKRD36BQ8N2N9 1353 aa37.9■■■■□ 3.66
SH3GL3-204ENST00000492099 FAM196AQ6ZSG2 479 aa37.88■■■■□ 3.65
SH3GL3-204ENST00000492099 DEFB132Q7Z7B7 95 aa37.88■■■■□ 3.65
SH3GL3-204ENST00000492099 ABCC6O95255 1503 aa37.87■■■■□ 3.65
SH3GL3-204ENST00000492099 CSB-PGBD3P0DP91 1061 aa37.85■■■■□ 3.65
SH3GL3-204ENST00000492099 OVOS2A0A0J9YW53 1432 aa37.85■■■■□ 3.65
SH3GL3-204ENST00000492099 OVOS2Q6IE36 1432 aa37.85■■■■□ 3.65
SH3GL3-204ENST00000492099 BAG6P46379 1132 aa37.84■■■■□ 3.65
SH3GL3-204ENST00000492099 CARD10Q9BWT7 1032 aa37.81■■■■□ 3.64
SH3GL3-204ENST00000492099 COG3Q96JB2 828 aa37.8■■■■□ 3.64
SH3GL3-204ENST00000492099 CDCA7Q9BWT1 371 aaPredicted RBP37.78■■■■□ 3.64
SH3GL3-204ENST00000492099 PARP4Q9UKK3 1724 aaKnown RBP37.78■■■■□ 3.64
SH3GL3-204ENST00000492099 RGPD5Q99666 1765 aa37.78■■■■□ 3.64
SH3GL3-204ENST00000492099 RGPD1P0DJD0 1748 aa37.76■■■■□ 3.64
SH3GL3-204ENST00000492099 C11orf95C9JLR9 678 aaPredicted RBP37.75■■■■□ 3.63
SH3GL3-204ENST00000492099 DDB1Q16531 1140 aa37.74■■■■□ 3.63
SH3GL3-204ENST00000492099 CCDC7Q96M83 1385 aa37.73■■■■□ 3.63
SH3GL3-204ENST00000492099 ERBB3P21860 1342 aa37.73■■■■□ 3.63
SH3GL3-204ENST00000492099 TRIM37O94972 964 aa37.73■■■■□ 3.63
SH3GL3-204ENST00000492099 EIF4G2P78344 907 aaKnown RBP eCLIP37.72■■■■□ 3.63
SH3GL3-204ENST00000492099 LTN1O94822 1766 aa37.71■■■■□ 3.63
SH3GL3-204ENST00000492099 DISP2A7MBM2 1401 aa37.7■■■■□ 3.63
SH3GL3-204ENST00000492099 FYB1O15117 783 aa37.7■■■■□ 3.63
SH3GL3-204ENST00000492099 EN1Q05925 392 aaPredicted RBP37.69■■■■□ 3.62
SH3GL3-204ENST00000492099 IP6K1Q92551 441 aa37.68■■■■□ 3.62
SH3GL3-204ENST00000492099 ANKRD24Q8TF21 1146 aa37.67■■■■□ 3.62
SH3GL3-204ENST00000492099 NLRP2Q9NX02 1062 aa37.66■■■■□ 3.62
SH3GL3-204ENST00000492099 OVOS2A0A0G2JMS6 1433 aa37.65■■■■□ 3.62
SH3GL3-204ENST00000492099 GGNBP2Q9H3C7 697 aa37.65■■■■□ 3.62
SH3GL3-204ENST00000492099 LRRC37A3O60309 1634 aa37.65■■■■□ 3.62
SH3GL3-204ENST00000492099 TNS1Q9HBL0 1735 aaKnown RBP37.64■■■■□ 3.62
SH3GL3-204ENST00000492099 APBA3O96018 575 aa37.63■■■■□ 3.61
SH3GL3-204ENST00000492099 HSPA5P11021 654 aaKnown RBP37.63■■■■□ 3.61
SH3GL3-204ENST00000492099 WNK3Q9BYP7 1800 aa37.63■■■■□ 3.61
SH3GL3-204ENST00000492099 MAP3K19Q56UN5 1328 aa37.62■■■■□ 3.61
SH3GL3-204ENST00000492099 EXOC5O00471 708 aa37.62■■■■□ 3.61
SH3GL3-204ENST00000492099 CARD14Q9BXL6 1004 aa37.61■■■■□ 3.61
SH3GL3-204ENST00000492099 MYOM1P52179 1685 aa37.6■■■■□ 3.61
SH3GL3-204ENST00000492099 AMPHP49418 695 aa37.6■■■■□ 3.61
SH3GL3-204ENST00000492099 FBLN1P23142 703 aa37.58■■■■□ 3.61
SH3GL3-204ENST00000492099 CAMKK2Q96RR4 588 aa37.58■■■■□ 3.61
SH3GL3-204ENST00000492099 HOXC9P31274 260 aa37.57■■■■□ 3.6
SH3GL3-204ENST00000492099 EZH2Q15910 746 aaKnown RBP37.57■■■■□ 3.6
SH3GL3-204ENST00000492099 MARCH10Q8NA82 808 aaPredicted RBP37.57■■■■□ 3.6
SH3GL3-204ENST00000492099 PARD3Q8TEW0 1356 aa37.56■■■■□ 3.6
SH3GL3-204ENST00000492099 NSD3Q9BZ95 1437 aa37.56■■■■□ 3.6
SH3GL3-204ENST00000492099 POLR3GLQ9BT43 218 aa37.56■■■■□ 3.6
SH3GL3-204ENST00000492099 PEAK1Q9H792 1746 aa37.56■■■■□ 3.6
SH3GL3-204ENST00000492099 IL2RBP14784 551 aa37.55■■■■□ 3.6
SH3GL3-204ENST00000492099 RTL1A6NKG5 1358 aa37.54■■■■□ 3.6
SH3GL3-204ENST00000492099 BCL9O00512 1426 aa37.53■■■■□ 3.6
SH3GL3-204ENST00000492099 LTV1Q96GA3 475 aaPredicted RBP37.53■■■■□ 3.6
SH3GL3-204ENST00000492099 RRS1Q15050 365 aaKnown RBP37.52■■■■□ 3.6
SH3GL3-204ENST00000492099 KIF20BQ96Q89 1820 aa37.51■■■■□ 3.6
SH3GL3-204ENST00000492099 TNS2Q63HR2 1409 aa37.51■■■■□ 3.59
SH3GL3-204ENST00000492099 BCL11BQ9C0K0 894 aaPredicted RBP37.48■■■■□ 3.59
SH3GL3-204ENST00000492099 CGNL1Q0VF96 1302 aa37.47■■■■□ 3.59
SH3GL3-204ENST00000492099 FAM208AQ9UK61 1670 aaKnown RBP37.47■■■■□ 3.59
SH3GL3-204ENST00000492099 KIF24Q5T7B8 1368 aa37.43■■■■□ 3.58
SH3GL3-204ENST00000492099 SBF2Q86WG5 1849 aa37.42■■■■□ 3.58
SH3GL3-204ENST00000492099 PSDA5PKW4 1024 aaPredicted RBP37.41■■■■□ 3.58
SH3GL3-204ENST00000492099 PLSCR1O15162 318 aa37.41■■■■□ 3.58
SH3GL3-204ENST00000492099 SMG6Q86US8 1419 aaKnown RBP37.39■■■■□ 3.58
SH3GL3-204ENST00000492099 FLT4P35916 1363 aa37.39■■■■□ 3.58
SH3GL3-204ENST00000492099 INSRP06213 1382 aa37.38■■■■□ 3.57
SH3GL3-204ENST00000492099 SRCAPQ6ZRS2 3230 aa37.37■■■■□ 3.57
SH3GL3-204ENST00000492099 R3HDM1Q15032 1099 aaKnown RBP37.36■■■■□ 3.57
SH3GL3-204ENST00000492099 PTF1AQ7RTS3 328 aa37.36■■■■□ 3.57
SH3GL3-204ENST00000492099 PANK3Q9H999 370 aa37.36■■■■□ 3.57
SH3GL3-204ENST00000492099 HSP90AB2PQ58FF8 381 aa37.35■■■■□ 3.57
SH3GL3-204ENST00000492099 NBPF14Q5TI25 921 aa37.35■■■■□ 3.57
SH3GL3-204ENST00000492099 RREB1Q92766 1687 aa37.34■■■■□ 3.57
SH3GL3-204ENST00000492099 NBPF6Q5VWK0 638 aa37.34■■■■□ 3.57
SH3GL3-204ENST00000492099 NBPF4Q96M43 638 aa37.34■■■■□ 3.57
SH3GL3-204ENST00000492099 EMILIN1Q9Y6C2 1016 aa37.32■■■■□ 3.56
SH3GL3-204ENST00000492099 RGPD3A6NKT7 1758 aaPredicted RBP37.29■■■■□ 3.56
SH3GL3-204ENST00000492099 RGPD4Q7Z3J3 1758 aa37.29■■■■□ 3.56
SH3GL3-204ENST00000492099 DDX54Q8TDD1 881 aaKnown RBP37.29■■■■□ 3.56
SH3GL3-204ENST00000492099 KCNQ2O43526 872 aa37.28■■■■□ 3.56
SH3GL3-204ENST00000492099 NUP188Q5SRE5 1749 aa37.27■■■■□ 3.56
SH3GL3-204ENST00000492099 PPM1GO15355 546 aaPredicted RBP37.27■■■■□ 3.56
SH3GL3-204ENST00000492099 ACSBG1Q96GR2 724 aa37.27■■■■□ 3.56
SH3GL3-204ENST00000492099 RGPD2P0DJD1 1756 aa37.27■■■■□ 3.56
SH3GL3-204ENST00000492099 ZCRB1Q8TBF4 217 aaKnown RBP37.26■■■■□ 3.56
SH3GL3-204ENST00000492099 RAPGEF4Q8WZA2 1011 aa37.25■■■■□ 3.55
SH3GL3-204ENST00000492099 USHBP1Q8N6Y0 703 aa37.24■■■■□ 3.55
SH3GL3-204ENST00000492099 WASHC2AQ641Q2 1341 aa37.24■■■■□ 3.55
SH3GL3-204ENST00000492099 MEGF6O75095 1541 aa37.23■■■■□ 3.55
SH3GL3-204ENST00000492099 NSD2O96028 1365 aa37.23■■■■□ 3.55
SH3GL3-204ENST00000492099 POLKQ9UBT6 870 aa37.23■■■■□ 3.55
SH3GL3-204ENST00000492099 NHSQ6T4R5 1651 aa37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms