RNA–Protein interactions for RNA: ENST00000491998.5

DFFB-211, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,152 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-211ENST00000491998 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
DFFB-211ENST00000491998 SOX12O15370 315 aa14.34□□□□□ -0.11
DFFB-211ENST00000491998 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
DFFB-211ENST00000491998 PREX1Q8TCU6 1659 aa14.34□□□□□ -0.11
DFFB-211ENST00000491998 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
DFFB-211ENST00000491998 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
DFFB-211ENST00000491998 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
DFFB-211ENST00000491998 ZKSCAN2Q63HK3 967 aa14.33□□□□□ -0.12
DFFB-211ENST00000491998 HSP90AB1P08238 724 aaKnown RBP14.33□□□□□ -0.12
DFFB-211ENST00000491998 MTHFSP49914 203 aa14.33□□□□□ -0.12
DFFB-211ENST00000491998 CCDC94Q9BW85 323 aaPredicted RBP14.33□□□□□ -0.12
DFFB-211ENST00000491998 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.33□□□□□ -0.12
DFFB-211ENST00000491998 ZNF622Q969S3 477 aaKnown RBP eCLIP14.32□□□□□ -0.12
DFFB-211ENST00000491998 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
DFFB-211ENST00000491998 SMC4Q9NTJ3 1288 aa14.32□□□□□ -0.12
DFFB-211ENST00000491998 TERF1P54274 439 aa14.32□□□□□ -0.12
DFFB-211ENST00000491998 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
DFFB-211ENST00000491998 MYO5BQ9ULV0 1848 aa14.32□□□□□ -0.12
DFFB-211ENST00000491998 NEURL4Q96JN8 1562 aa14.32□□□□□ -0.12
DFFB-211ENST00000491998 CD2BP2O95400 341 aaKnown RBP14.32□□□□□ -0.12
DFFB-211ENST00000491998 TICAM2Q86XR7 235 aa14.31□□□□□ -0.12
DFFB-211ENST00000491998 MYOM2P54296 1465 aa14.31□□□□□ -0.12
DFFB-211ENST00000491998 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
DFFB-211ENST00000491998 TRIM27P14373 513 aa14.31□□□□□ -0.12
DFFB-211ENST00000491998 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.12
DFFB-211ENST00000491998 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
DFFB-211ENST00000491998 ERVK-7P63135 1459 aa14.3□□□□□ -0.12
DFFB-211ENST00000491998 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
DFFB-211ENST00000491998 PPLO60437 1756 aa14.3□□□□□ -0.12
DFFB-211ENST00000491998 WDR63Q8IWG1 891 aa14.3□□□□□ -0.12
DFFB-211ENST00000491998 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
DFFB-211ENST00000491998 POLR3AO14802 1390 aaPredicted RBP14.29□□□□□ -0.12
DFFB-211ENST00000491998 OFD1O75665 1012 aa14.29□□□□□ -0.12
DFFB-211ENST00000491998 C14orf93Q9H972 538 aaKnown RBP14.29□□□□□ -0.12
DFFB-211ENST00000491998 NRXN1Q9ULB1 1477 aa14.29□□□□□ -0.12
DFFB-211ENST00000491998 MYOM1P52179 1685 aa14.29□□□□□ -0.12
DFFB-211ENST00000491998 DDIT3P35638 169 aa14.28□□□□□ -0.12
DFFB-211ENST00000491998 SSH1Q8WYL5 1049 aa14.28□□□□□ -0.12
DFFB-211ENST00000491998 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
DFFB-211ENST00000491998 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
DFFB-211ENST00000491998 DNAJC2Q99543 621 aaKnown RBP14.28□□□□□ -0.12
DFFB-211ENST00000491998 IQGAP1P46940 1657 aa14.28□□□□□ -0.12
DFFB-211ENST00000491998 SSFA2P28290 1259 aa14.28□□□□□ -0.12
DFFB-211ENST00000491998 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.28□□□□□ -0.12
DFFB-211ENST00000491998 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
DFFB-211ENST00000491998 NOB1Q9ULX3 412 aaKnown RBP14.28□□□□□ -0.12
DFFB-211ENST00000491998 NEXMIFQ5QGS0 1516 aa14.28□□□□□ -0.12
DFFB-211ENST00000491998 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.12
DFFB-211ENST00000491998 GBP4Q96PP9 640 aa14.27□□□□□ -0.12
DFFB-211ENST00000491998 NSD3Q9BZ95 1437 aa14.27□□□□□ -0.12
DFFB-211ENST00000491998 ZMYM3Q14202 1370 aa14.27□□□□□ -0.13
DFFB-211ENST00000491998 SLC20A2Q08357 652 aa14.26□□□□□ -0.13
DFFB-211ENST00000491998 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
DFFB-211ENST00000491998 CEBPAP49715 358 aaPredicted RBP14.26□□□□□ -0.13
DFFB-211ENST00000491998 IGSF3O75054 1194 aa14.26□□□□□ -0.13
DFFB-211ENST00000491998 PTMSP20962 102 aa14.26□□□□□ -0.13
DFFB-211ENST00000491998 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
DFFB-211ENST00000491998 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
DFFB-211ENST00000491998 UQCRHLA0A096LP55 91 aa14.25□□□□□ -0.13
DFFB-211ENST00000491998 UQCRHP07919 91 aa14.25□□□□□ -0.13
DFFB-211ENST00000491998 NASPP49321 788 aaPredicted RBP14.25□□□□□ -0.13
DFFB-211ENST00000491998 ESF1Q9H501 851 aaKnown RBP14.25□□□□□ -0.13
DFFB-211ENST00000491998 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
DFFB-211ENST00000491998 SMC5Q8IY18 1101 aa14.25□□□□□ -0.13
DFFB-211ENST00000491998 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
DFFB-211ENST00000491998 KIF2CQ99661 725 aa14.24□□□□□ -0.13
DFFB-211ENST00000491998 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
DFFB-211ENST00000491998 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
DFFB-211ENST00000491998 ATF7IPQ6VMQ6 1270 aa14.24□□□□□ -0.13
DFFB-211ENST00000491998 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
DFFB-211ENST00000491998 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
DFFB-211ENST00000491998 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
DFFB-211ENST00000491998 DDX49Q9Y6V7 483 aaKnown RBP14.24□□□□□ -0.13
DFFB-211ENST00000491998 CBX1P83916 185 aa14.23□□□□□ -0.13
DFFB-211ENST00000491998 GAS2L2Q8NHY3 880 aa14.23□□□□□ -0.13
DFFB-211ENST00000491998 KIAA1210Q9ULL0 1709 aa14.23□□□□□ -0.13
DFFB-211ENST00000491998 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
DFFB-211ENST00000491998 SPATA31D1Q6ZQQ2 1576 aa14.23□□□□□ -0.13
DFFB-211ENST00000491998 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 SNX21Q969T3 373 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 KDM5AP29375 1690 aaKnown RBP14.22□□□□□ -0.13
DFFB-211ENST00000491998 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
DFFB-211ENST00000491998 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 KCNJ4P48050 445 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 ZNF592Q92610 1267 aa14.22□□□□□ -0.13
DFFB-211ENST00000491998 NCOA3Q9Y6Q9 1424 aa14.21□□□□□ -0.13
DFFB-211ENST00000491998 MINK1Q8N4C8 1332 aaPredicted RBP14.21□□□□□ -0.13
DFFB-211ENST00000491998 ZBTB40Q9NUA8 1239 aa14.21□□□□□ -0.13
DFFB-211ENST00000491998 DYNC1I1O14576 645 aa14.21□□□□□ -0.14
DFFB-211ENST00000491998 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.14
DFFB-211ENST00000491998 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.14
DFFB-211ENST00000491998 NUCB1Q02818 461 aa14.2□□□□□ -0.14
DFFB-211ENST00000491998 ZSCAN30Q86W11 494 aa14.2□□□□□ -0.14
DFFB-211ENST00000491998 PLCD4Q9BRC7 762 aa14.2□□□□□ -0.14
DFFB-211ENST00000491998 MSNP26038 577 aaKnown RBP14.2□□□□□ -0.14
DFFB-211ENST00000491998 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
DFFB-211ENST00000491998 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
DFFB-211ENST00000491998 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 667.7 ms