RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 USP31Q70CQ4 1352 aa21.08■□□□□ 0.96
TOM1-215ENST00000491987 AXIN2Q9Y2T1 843 aa21.07■□□□□ 0.96
TOM1-215ENST00000491987 NINLQ9Y2I6 1382 aa21.07■□□□□ 0.96
TOM1-215ENST00000491987 THRAP3Q9Y2W1 955 aaKnown RBP21.06■□□□□ 0.96
TOM1-215ENST00000491987 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
TOM1-215ENST00000491987 RGPD1P0DJD0 1748 aa21.04■□□□□ 0.96
TOM1-215ENST00000491987 TMF1P82094 1093 aa21.04■□□□□ 0.96
TOM1-215ENST00000491987 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
TOM1-215ENST00000491987 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
TOM1-215ENST00000491987 PDE3BQ13370 1112 aa21.03■□□□□ 0.96
TOM1-215ENST00000491987 RGPD5Q99666 1765 aa21.02■□□□□ 0.96
TOM1-215ENST00000491987 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
TOM1-215ENST00000491987 OVOS2A0A0J9YW53 1432 aa21.02■□□□□ 0.96
TOM1-215ENST00000491987 OVOS2Q6IE36 1432 aa21.02■□□□□ 0.96
TOM1-215ENST00000491987 ABCC6O95255 1503 aa21.01■□□□□ 0.95
TOM1-215ENST00000491987 BAG6P46379 1132 aa21.01■□□□□ 0.95
TOM1-215ENST00000491987 CSB-PGBD3P0DP91 1061 aa21■□□□□ 0.95
TOM1-215ENST00000491987 FAM196AQ6ZSG2 479 aa21■□□□□ 0.95
TOM1-215ENST00000491987 TNS1Q9HBL0 1735 aaKnown RBP21■□□□□ 0.95
TOM1-215ENST00000491987 ANKRD36BQ8N2N9 1353 aa20.99■□□□□ 0.95
TOM1-215ENST00000491987 LTN1O94822 1766 aa20.99■□□□□ 0.95
TOM1-215ENST00000491987 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
TOM1-215ENST00000491987 WNK3Q9BYP7 1800 aa20.98■□□□□ 0.95
TOM1-215ENST00000491987 TRIM37O94972 964 aa20.97■□□□□ 0.95
TOM1-215ENST00000491987 EN1Q05925 392 aaPredicted RBP20.96■□□□□ 0.95
TOM1-215ENST00000491987 CDCA8Q53HL2 280 aa20.96■□□□□ 0.95
TOM1-215ENST00000491987 CARD10Q9BWT7 1032 aa20.96■□□□□ 0.95
TOM1-215ENST00000491987 DISP2A7MBM2 1401 aa20.95■□□□□ 0.94
TOM1-215ENST00000491987 DDB1Q16531 1140 aa20.94■□□□□ 0.94
TOM1-215ENST00000491987 COG3Q96JB2 828 aa20.94■□□□□ 0.94
TOM1-215ENST00000491987 ERBB3P21860 1342 aa20.93■□□□□ 0.94
TOM1-215ENST00000491987 MYOM1P52179 1685 aa20.93■□□□□ 0.94
TOM1-215ENST00000491987 CCDC7Q96M83 1385 aa20.92■□□□□ 0.94
TOM1-215ENST00000491987 OVOS2A0A0G2JMS6 1433 aa20.92■□□□□ 0.94
TOM1-215ENST00000491987 CDCA7Q9BWT1 371 aaPredicted RBP20.91■□□□□ 0.94
TOM1-215ENST00000491987 PEAK1Q9H792 1746 aa20.91■□□□□ 0.94
TOM1-215ENST00000491987 APBA3O96018 575 aa20.9■□□□□ 0.94
TOM1-215ENST00000491987 ANKRD24Q8TF21 1146 aa20.9■□□□□ 0.94
TOM1-215ENST00000491987 NLRP2Q9NX02 1062 aa20.9■□□□□ 0.94
TOM1-215ENST00000491987 EZH2Q15910 746 aaKnown RBP20.89■□□□□ 0.93
TOM1-215ENST00000491987 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.93
TOM1-215ENST00000491987 FBLN1P23142 703 aa20.88■□□□□ 0.93
TOM1-215ENST00000491987 MAP3K19Q56UN5 1328 aa20.87■□□□□ 0.93
TOM1-215ENST00000491987 C11orf95C9JLR9 678 aaPredicted RBP20.87■□□□□ 0.93
TOM1-215ENST00000491987 FYB1O15117 783 aa20.87■□□□□ 0.93
TOM1-215ENST00000491987 MARCH10Q8NA82 808 aaPredicted RBP20.87■□□□□ 0.93
TOM1-215ENST00000491987 IP6K1Q92551 441 aa20.87■□□□□ 0.93
TOM1-215ENST00000491987 KIF20BQ96Q89 1820 aa20.87■□□□□ 0.93
TOM1-215ENST00000491987 CAMKK2Q96RR4 588 aa20.86■□□□□ 0.93
TOM1-215ENST00000491987 TNS2Q63HR2 1409 aa20.86■□□□□ 0.93
TOM1-215ENST00000491987 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
TOM1-215ENST00000491987 EXOC5O00471 708 aa20.85■□□□□ 0.93
TOM1-215ENST00000491987 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
TOM1-215ENST00000491987 LTV1Q96GA3 475 aaPredicted RBP20.85■□□□□ 0.93
TOM1-215ENST00000491987 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
TOM1-215ENST00000491987 NSD3Q9BZ95 1437 aa20.85■□□□□ 0.93
TOM1-215ENST00000491987 HSPA5P11021 654 aaKnown RBP20.84■□□□□ 0.93
TOM1-215ENST00000491987 AMPHP49418 695 aa20.84■□□□□ 0.93
TOM1-215ENST00000491987 CARD14Q9BXL6 1004 aa20.84■□□□□ 0.93
TOM1-215ENST00000491987 PARD3Q8TEW0 1356 aa20.84■□□□□ 0.93
TOM1-215ENST00000491987 HOXC9P31274 260 aa20.83■□□□□ 0.93
TOM1-215ENST00000491987 RREB1Q92766 1687 aa20.83■□□□□ 0.92
TOM1-215ENST00000491987 FAM208AQ9UK61 1670 aaKnown RBP20.83■□□□□ 0.92
TOM1-215ENST00000491987 SBF2Q86WG5 1849 aa20.83■□□□□ 0.92
TOM1-215ENST00000491987 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
TOM1-215ENST00000491987 IL2RBP14784 551 aa20.81■□□□□ 0.92
TOM1-215ENST00000491987 BCL9O00512 1426 aa20.8■□□□□ 0.92
TOM1-215ENST00000491987 R3HDM1Q15032 1099 aaKnown RBP20.8■□□□□ 0.92
TOM1-215ENST00000491987 RTL1A6NKG5 1358 aa20.8■□□□□ 0.92
TOM1-215ENST00000491987 NUP188Q5SRE5 1749 aa20.79■□□□□ 0.92
TOM1-215ENST00000491987 PTF1AQ7RTS3 328 aa20.79■□□□□ 0.92
TOM1-215ENST00000491987 BCL11BQ9C0K0 894 aaPredicted RBP20.78■□□□□ 0.92
TOM1-215ENST00000491987 RGPD3A6NKT7 1758 aaPredicted RBP20.75■□□□□ 0.91
TOM1-215ENST00000491987 RGPD2P0DJD1 1756 aa20.75■□□□□ 0.91
TOM1-215ENST00000491987 RGPD4Q7Z3J3 1758 aa20.75■□□□□ 0.91
TOM1-215ENST00000491987 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
TOM1-215ENST00000491987 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
TOM1-215ENST00000491987 NHSQ6T4R5 1651 aa20.73■□□□□ 0.91
TOM1-215ENST00000491987 SRCAPQ6ZRS2 3230 aa20.73■□□□□ 0.91
TOM1-215ENST00000491987 ACSBG1Q96GR2 724 aa20.73■□□□□ 0.91
TOM1-215ENST00000491987 LRP5O75197 1615 aa20.73■□□□□ 0.91
TOM1-215ENST00000491987 FLT4P35916 1363 aa20.72■□□□□ 0.91
TOM1-215ENST00000491987 PLSCR1O15162 318 aa20.72■□□□□ 0.91
TOM1-215ENST00000491987 KCNQ2O43526 872 aa20.72■□□□□ 0.91
TOM1-215ENST00000491987 NBPF14Q5TI25 921 aa20.72■□□□□ 0.91
TOM1-215ENST00000491987 INSRP06213 1382 aa20.72■□□□□ 0.91
TOM1-215ENST00000491987 HSP90AB2PQ58FF8 381 aa20.71■□□□□ 0.91
TOM1-215ENST00000491987 USHBP1Q8N6Y0 703 aa20.71■□□□□ 0.91
TOM1-215ENST00000491987 EMILIN1Q9Y6C2 1016 aa20.71■□□□□ 0.91
TOM1-215ENST00000491987 KIF24Q5T7B8 1368 aa20.71■□□□□ 0.91
TOM1-215ENST00000491987 MEGF6O75095 1541 aa20.7■□□□□ 0.9
TOM1-215ENST00000491987 NBPF6Q5VWK0 638 aa20.7■□□□□ 0.9
TOM1-215ENST00000491987 DDX54Q8TDD1 881 aaKnown RBP20.7■□□□□ 0.9
TOM1-215ENST00000491987 NBPF4Q96M43 638 aa20.7■□□□□ 0.9
TOM1-215ENST00000491987 PANK3Q9H999 370 aa20.68■□□□□ 0.9
TOM1-215ENST00000491987 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
TOM1-215ENST00000491987 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
TOM1-215ENST00000491987 PROM2Q8N271 834 aa20.66■□□□□ 0.9
TOM1-215ENST00000491987 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
TOM1-215ENST00000491987 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms