RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 NLRP6P59044 892 aa20.95■□□□□ 0.94
SSR4-212ENST00000491833 TOM1L2Q6ZVM7 507 aa20.95■□□□□ 0.94
SSR4-212ENST00000491833 CPSF1Q10570 1443 aaKnown RBP20.94■□□□□ 0.94
SSR4-212ENST00000491833 ANO8Q9HCE9 1232 aaPredicted RBP20.93■□□□□ 0.94
SSR4-212ENST00000491833 WDR17Q8IZU2 1322 aa20.92■□□□□ 0.94
SSR4-212ENST00000491833 BCL9O00512 1426 aa20.91■□□□□ 0.94
SSR4-212ENST00000491833 TRPM1Q7Z4N2 1603 aa20.91■□□□□ 0.94
SSR4-212ENST00000491833 BCL11BQ9C0K0 894 aaPredicted RBP20.91■□□□□ 0.94
SSR4-212ENST00000491833 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
SSR4-212ENST00000491833 CDCA7Q9BWT1 371 aaPredicted RBP20.9■□□□□ 0.94
SSR4-212ENST00000491833 MYOM1P52179 1685 aa20.89■□□□□ 0.94
SSR4-212ENST00000491833 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
SSR4-212ENST00000491833 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
SSR4-212ENST00000491833 MARCH10Q8NA82 808 aaPredicted RBP20.86■□□□□ 0.93
SSR4-212ENST00000491833 AXIN2Q9Y2T1 843 aa20.86■□□□□ 0.93
SSR4-212ENST00000491833 ABCC6O95255 1503 aa20.86■□□□□ 0.93
SSR4-212ENST00000491833 PTF1AQ7RTS3 328 aa20.85■□□□□ 0.93
SSR4-212ENST00000491833 KCNH5Q8NCM2 988 aa20.85■□□□□ 0.93
SSR4-212ENST00000491833 CSB-PGBD3P0DP91 1061 aa20.84■□□□□ 0.93
SSR4-212ENST00000491833 TNS2Q63HR2 1409 aa20.84■□□□□ 0.93
SSR4-212ENST00000491833 NFAT5O94916 1531 aa20.83■□□□□ 0.93
SSR4-212ENST00000491833 ZBTB7AO95365 584 aa20.83■□□□□ 0.93
SSR4-212ENST00000491833 ARHGEF25Q86VW2 580 aa20.83■□□□□ 0.93
SSR4-212ENST00000491833 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.93
SSR4-212ENST00000491833 STK32BQ9NY57 414 aa20.83■□□□□ 0.93
SSR4-212ENST00000491833 CCDC7Q96M83 1385 aa20.83■□□□□ 0.92
SSR4-212ENST00000491833 NHSQ6T4R5 1651 aa20.83■□□□□ 0.92
SSR4-212ENST00000491833 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
SSR4-212ENST00000491833 TTC21AQ8NDW8 1320 aa20.82■□□□□ 0.92
SSR4-212ENST00000491833 PROM2Q8N271 834 aa20.82■□□□□ 0.92
SSR4-212ENST00000491833 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
SSR4-212ENST00000491833 SOX12O15370 315 aa20.81■□□□□ 0.92
SSR4-212ENST00000491833 TXNRD1Q16881 649 aa20.81■□□□□ 0.92
SSR4-212ENST00000491833 ZNF692Q9BU19 519 aaPredicted RBP20.81■□□□□ 0.92
SSR4-212ENST00000491833 EXOC5O00471 708 aa20.79■□□□□ 0.92
SSR4-212ENST00000491833 PTGER2P43116 358 aa20.79■□□□□ 0.92
SSR4-212ENST00000491833 MON2Q7Z3U7 1717 aa20.78■□□□□ 0.92
SSR4-212ENST00000491833 SLC15A2Q16348 729 aa20.78■□□□□ 0.92
SSR4-212ENST00000491833 ATF5Q9Y2D1 282 aaPredicted RBP20.78■□□□□ 0.92
SSR4-212ENST00000491833 USP54Q70EL1 1684 aa20.77■□□□□ 0.91
SSR4-212ENST00000491833 ROCK2O75116 1388 aaKnown RBP20.76■□□□□ 0.91
SSR4-212ENST00000491833 KTN1Q86UP2 1357 aaKnown RBP20.76■□□□□ 0.91
SSR4-212ENST00000491833 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
SSR4-212ENST00000491833 MTFR1LQ9H019 292 aa20.75■□□□□ 0.91
SSR4-212ENST00000491833 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
SSR4-212ENST00000491833 FHDC1Q9C0D6 1143 aaPredicted RBP20.74■□□□□ 0.91
SSR4-212ENST00000491833 LTN1O94822 1766 aa20.72■□□□□ 0.91
SSR4-212ENST00000491833 SYT17Q9BSW7 474 aa20.72■□□□□ 0.91
SSR4-212ENST00000491833 ERBB3P21860 1342 aa20.72■□□□□ 0.91
SSR4-212ENST00000491833 BTAF1O14981 1849 aa20.71■□□□□ 0.91
SSR4-212ENST00000491833 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
SSR4-212ENST00000491833 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
SSR4-212ENST00000491833 SGIP1Q9BQI5 828 aa20.7■□□□□ 0.9
SSR4-212ENST00000491833 USP31Q70CQ4 1352 aa20.7■□□□□ 0.9
SSR4-212ENST00000491833 CHD4Q14839 1912 aa20.69■□□□□ 0.9
SSR4-212ENST00000491833 UTRNP46939 3433 aa20.69■□□□□ 0.9
SSR4-212ENST00000491833 NLRP2Q9NX02 1062 aa20.68■□□□□ 0.9
SSR4-212ENST00000491833 MAP3K5Q99683 1374 aa20.68■□□□□ 0.9
SSR4-212ENST00000491833 IL2RBP14784 551 aa20.67■□□□□ 0.9
SSR4-212ENST00000491833 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
SSR4-212ENST00000491833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.66■□□□□ 0.9
SSR4-212ENST00000491833 ARXQ96QS3 562 aa20.66■□□□□ 0.9
SSR4-212ENST00000491833 CD163L1Q9NR16 1453 aa20.65■□□□□ 0.9
SSR4-212ENST00000491833 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
SSR4-212ENST00000491833 FAM208AQ9UK61 1670 aaKnown RBP20.64■□□□□ 0.9
SSR4-212ENST00000491833 ZNF827Q17R98 1081 aa20.63■□□□□ 0.89
SSR4-212ENST00000491833 NME9Q86XW9 330 aa20.63■□□□□ 0.89
SSR4-212ENST00000491833 ANKRD24Q8TF21 1146 aa20.63■□□□□ 0.89
SSR4-212ENST00000491833 EDC4Q6P2E9 1401 aaKnown RBP20.61■□□□□ 0.89
SSR4-212ENST00000491833 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
SSR4-212ENST00000491833 HDGFL2Q7Z4V5 671 aaPredicted RBP20.6■□□□□ 0.89
SSR4-212ENST00000491833 LRRC4BQ9NT99 713 aa20.59■□□□□ 0.89
SSR4-212ENST00000491833 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.89
SSR4-212ENST00000491833 TMC1Q8TDI8 760 aa20.58■□□□□ 0.89
SSR4-212ENST00000491833 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
SSR4-212ENST00000491833 TUBGCP6Q96RT7 1819 aa20.57■□□□□ 0.88
SSR4-212ENST00000491833 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
SSR4-212ENST00000491833 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
SSR4-212ENST00000491833 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
SSR4-212ENST00000491833 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
SSR4-212ENST00000491833 POLD1P28340 1107 aa20.56■□□□□ 0.88
SSR4-212ENST00000491833 GPR162Q16538 588 aa20.56■□□□□ 0.88
SSR4-212ENST00000491833 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
SSR4-212ENST00000491833 SLC16A10Q8TF71 515 aa20.56■□□□□ 0.88
SSR4-212ENST00000491833 AKT1S1Q96B36 256 aa20.56■□□□□ 0.88
SSR4-212ENST00000491833 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
SSR4-212ENST00000491833 C1QTNF8P60827 252 aa20.55■□□□□ 0.88
SSR4-212ENST00000491833 LY75O60449 1722 aa20.54■□□□□ 0.88
SSR4-212ENST00000491833 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
SSR4-212ENST00000491833 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
SSR4-212ENST00000491833 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
SSR4-212ENST00000491833 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
SSR4-212ENST00000491833 ANKRD36BQ8N2N9 1353 aa20.52■□□□□ 0.88
SSR4-212ENST00000491833 IP6K1Q92551 441 aa20.52■□□□□ 0.88
SSR4-212ENST00000491833 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
SSR4-212ENST00000491833 SHANK3Q9BYB0 1731 aa20.52■□□□□ 0.88
SSR4-212ENST00000491833 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
SSR4-212ENST00000491833 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
SSR4-212ENST00000491833 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
SSR4-212ENST00000491833 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms