RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 USP35Q9P2H5 1018 aa22.76■■□□□ 1.23
HCLS1-210ENST00000491824 CGNL1Q0VF96 1302 aa22.76■■□□□ 1.23
HCLS1-210ENST00000491824 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
HCLS1-210ENST00000491824 TOM1L2Q6ZVM7 507 aa22.74■■□□□ 1.23
HCLS1-210ENST00000491824 THRAP3Q9Y2W1 955 aaKnown RBP22.74■■□□□ 1.23
HCLS1-210ENST00000491824 CRB1P82279 1406 aa22.74■■□□□ 1.23
HCLS1-210ENST00000491824 ONECUT3O60422 494 aaPredicted RBP22.73■■□□□ 1.23
HCLS1-210ENST00000491824 TCP11L2Q8N4U5 519 aa22.73■■□□□ 1.23
HCLS1-210ENST00000491824 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
HCLS1-210ENST00000491824 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
HCLS1-210ENST00000491824 FYB1O15117 783 aa22.71■■□□□ 1.23
HCLS1-210ENST00000491824 KRT27Q7Z3Y8 459 aa22.71■■□□□ 1.23
HCLS1-210ENST00000491824 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
HCLS1-210ENST00000491824 BARGINQ6ZT62 677 aa22.7■■□□□ 1.22
HCLS1-210ENST00000491824 AMPHP49418 695 aa22.69■■□□□ 1.22
HCLS1-210ENST00000491824 LTN1O94822 1766 aa22.68■■□□□ 1.22
HCLS1-210ENST00000491824 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
HCLS1-210ENST00000491824 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.22
HCLS1-210ENST00000491824 CARD14Q9BXL6 1004 aa22.68■■□□□ 1.22
HCLS1-210ENST00000491824 PANK3Q9H999 370 aa22.67■■□□□ 1.22
HCLS1-210ENST00000491824 AXIN2Q9Y2T1 843 aa22.67■■□□□ 1.22
HCLS1-210ENST00000491824 COL18A1P39060 1754 aa22.67■■□□□ 1.22
HCLS1-210ENST00000491824 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
HCLS1-210ENST00000491824 RTL1A6NKG5 1358 aa22.65■■□□□ 1.22
HCLS1-210ENST00000491824 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
HCLS1-210ENST00000491824 CCDC125Q86Z20 511 aa22.65■■□□□ 1.22
HCLS1-210ENST00000491824 IP6K1Q92551 441 aa22.65■■□□□ 1.22
HCLS1-210ENST00000491824 CDCA7Q9BWT1 371 aaPredicted RBP22.65■■□□□ 1.22
HCLS1-210ENST00000491824 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
HCLS1-210ENST00000491824 THSD7AQ9UPZ6 1657 aa22.65■■□□□ 1.22
HCLS1-210ENST00000491824 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
HCLS1-210ENST00000491824 SF3B2Q13435 895 aaKnown RBP22.64■■□□□ 1.21
HCLS1-210ENST00000491824 ANKRD24Q8TF21 1146 aa22.64■■□□□ 1.21
HCLS1-210ENST00000491824 CARD10Q9BWT7 1032 aa22.64■■□□□ 1.21
HCLS1-210ENST00000491824 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
HCLS1-210ENST00000491824 NSD2O96028 1365 aa22.63■■□□□ 1.21
HCLS1-210ENST00000491824 ERBB3P21860 1342 aa22.63■■□□□ 1.21
HCLS1-210ENST00000491824 MAP3K19Q56UN5 1328 aa22.63■■□□□ 1.21
HCLS1-210ENST00000491824 C11orf95C9JLR9 678 aaPredicted RBP22.63■■□□□ 1.21
HCLS1-210ENST00000491824 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
HCLS1-210ENST00000491824 BRWD3Q6RI45 1802 aa22.61■■□□□ 1.21
HCLS1-210ENST00000491824 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
HCLS1-210ENST00000491824 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
HCLS1-210ENST00000491824 HOXC9P31274 260 aa22.59■■□□□ 1.21
HCLS1-210ENST00000491824 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
HCLS1-210ENST00000491824 LTV1Q96GA3 475 aaPredicted RBP22.59■■□□□ 1.21
HCLS1-210ENST00000491824 DDB1Q16531 1140 aa22.58■■□□□ 1.21
HCLS1-210ENST00000491824 FLT4P35916 1363 aa22.58■■□□□ 1.21
HCLS1-210ENST00000491824 FAM208AQ9UK61 1670 aaKnown RBP22.57■■□□□ 1.2
HCLS1-210ENST00000491824 FAM196AQ6ZSG2 479 aa22.56■■□□□ 1.2
HCLS1-210ENST00000491824 PARP4Q9UKK3 1724 aaKnown RBP22.55■■□□□ 1.2
HCLS1-210ENST00000491824 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
HCLS1-210ENST00000491824 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
HCLS1-210ENST00000491824 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
HCLS1-210ENST00000491824 FBLN1P23142 703 aa22.54■■□□□ 1.2
HCLS1-210ENST00000491824 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
HCLS1-210ENST00000491824 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
HCLS1-210ENST00000491824 WASHC2AQ641Q2 1341 aa22.53■■□□□ 1.2
HCLS1-210ENST00000491824 INSRP06213 1382 aa22.52■■□□□ 1.2
HCLS1-210ENST00000491824 EXOC5O00471 708 aa22.52■■□□□ 1.2
HCLS1-210ENST00000491824 IL2RBP14784 551 aa22.52■■□□□ 1.2
HCLS1-210ENST00000491824 EP400Q96L91 3159 aa22.51■■□□□ 1.19
HCLS1-210ENST00000491824 OVOS2A0A0G2JMS6 1433 aa22.51■■□□□ 1.19
HCLS1-210ENST00000491824 WNK3Q9BYP7 1800 aa22.51■■□□□ 1.19
HCLS1-210ENST00000491824 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
HCLS1-210ENST00000491824 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
HCLS1-210ENST00000491824 BAG6P46379 1132 aa22.49■■□□□ 1.19
HCLS1-210ENST00000491824 EMILIN1Q9Y6C2 1016 aa22.49■■□□□ 1.19
HCLS1-210ENST00000491824 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
HCLS1-210ENST00000491824 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
HCLS1-210ENST00000491824 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
HCLS1-210ENST00000491824 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
HCLS1-210ENST00000491824 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
HCLS1-210ENST00000491824 POLKQ9UBT6 870 aa22.45■■□□□ 1.18
HCLS1-210ENST00000491824 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
HCLS1-210ENST00000491824 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
HCLS1-210ENST00000491824 TRIM37O94972 964 aa22.43■■□□□ 1.18
HCLS1-210ENST00000491824 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
HCLS1-210ENST00000491824 TATP17735 454 aaPredicted RBP22.41■■□□□ 1.18
HCLS1-210ENST00000491824 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
HCLS1-210ENST00000491824 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
HCLS1-210ENST00000491824 NBPF6Q5VWK0 638 aa22.4■■□□□ 1.18
HCLS1-210ENST00000491824 NBPF4Q96M43 638 aa22.4■■□□□ 1.18
HCLS1-210ENST00000491824 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
HCLS1-210ENST00000491824 MARCH10Q8NA82 808 aaPredicted RBP22.39■■□□□ 1.17
HCLS1-210ENST00000491824 APBA3O96018 575 aa22.38■■□□□ 1.17
HCLS1-210ENST00000491824 USHBP1Q8N6Y0 703 aa22.38■■□□□ 1.17
HCLS1-210ENST00000491824 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
HCLS1-210ENST00000491824 DEFB132Q7Z7B7 95 aa22.37■■□□□ 1.17
HCLS1-210ENST00000491824 BCL9O00512 1426 aa22.37■■□□□ 1.17
HCLS1-210ENST00000491824 ZCRB1Q8TBF4 217 aaKnown RBP22.36■■□□□ 1.17
HCLS1-210ENST00000491824 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
HCLS1-210ENST00000491824 PARD3Q8TEW0 1356 aa22.36■■□□□ 1.17
HCLS1-210ENST00000491824 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
HCLS1-210ENST00000491824 BCL11BQ9C0K0 894 aaPredicted RBP22.34■■□□□ 1.17
HCLS1-210ENST00000491824 RGPD2P0DJD1 1756 aa22.34■■□□□ 1.17
HCLS1-210ENST00000491824 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
HCLS1-210ENST00000491824 MEGF6O75095 1541 aa22.33■■□□□ 1.17
HCLS1-210ENST00000491824 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
HCLS1-210ENST00000491824 PCDH11XQ9BZA7 1347 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms