RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 KTN1Q86UP2 1357 aaKnown RBP24.63■■□□□ 1.53
PBX3-209ENST00000491787 NFAT5O94916 1531 aa24.62■■□□□ 1.53
PBX3-209ENST00000491787 CARD11Q9BXL7 1154 aa24.62■■□□□ 1.53
PBX3-209ENST00000491787 ZBTB7CA1YPR0 619 aa24.61■■□□□ 1.53
PBX3-209ENST00000491787 TOM1L2Q6ZVM7 507 aa24.61■■□□□ 1.53
PBX3-209ENST00000491787 USP31Q70CQ4 1352 aa24.61■■□□□ 1.53
PBX3-209ENST00000491787 WNK3Q9BYP7 1800 aa24.61■■□□□ 1.53
PBX3-209ENST00000491787 LRRC37A3O60309 1634 aa24.61■■□□□ 1.53
PBX3-209ENST00000491787 USP54Q70EL1 1684 aa24.6■■□□□ 1.53
PBX3-209ENST00000491787 CD163L1Q9NR16 1453 aa24.6■■□□□ 1.53
PBX3-209ENST00000491787 NUP188Q5SRE5 1749 aa24.6■■□□□ 1.53
PBX3-209ENST00000491787 PUS7Q96PZ0 661 aaKnown RBP24.59■■□□□ 1.53
PBX3-209ENST00000491787 CDCA7Q9BWT1 371 aaPredicted RBP24.59■■□□□ 1.53
PBX3-209ENST00000491787 CARD10Q9BWT7 1032 aa24.59■■□□□ 1.53
PBX3-209ENST00000491787 ABCC6O95255 1503 aa24.59■■□□□ 1.53
PBX3-209ENST00000491787 OVOS2A0A0G2JMS6 1433 aa24.59■■□□□ 1.53
PBX3-209ENST00000491787 OVOS2A0A0J9YW53 1432 aa24.59■■□□□ 1.53
PBX3-209ENST00000491787 OVOS2Q6IE36 1432 aa24.59■■□□□ 1.53
PBX3-209ENST00000491787 DDB1Q16531 1140 aa24.58■■□□□ 1.53
PBX3-209ENST00000491787 BCL9O00512 1426 aa24.58■■□□□ 1.53
PBX3-209ENST00000491787 RGPD3A6NKT7 1758 aaPredicted RBP24.55■■□□□ 1.52
PBX3-209ENST00000491787 RGPD4Q7Z3J3 1758 aa24.55■■□□□ 1.52
PBX3-209ENST00000491787 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
PBX3-209ENST00000491787 PLSCR1O15162 318 aa24.54■■□□□ 1.52
PBX3-209ENST00000491787 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
PBX3-209ENST00000491787 SLC12A5Q9H2X9 1139 aa24.53■■□□□ 1.52
PBX3-209ENST00000491787 SOX12O15370 315 aa24.52■■□□□ 1.52
PBX3-209ENST00000491787 NBPF14Q5TI25 921 aa24.52■■□□□ 1.52
PBX3-209ENST00000491787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.52■■□□□ 1.52
PBX3-209ENST00000491787 BCL11BQ9C0K0 894 aaPredicted RBP24.52■■□□□ 1.52
PBX3-209ENST00000491787 CCDC7Q96M83 1385 aa24.51■■□□□ 1.51
PBX3-209ENST00000491787 NME9Q86XW9 330 aa24.5■■□□□ 1.51
PBX3-209ENST00000491787 CSB-PGBD3P0DP91 1061 aa24.49■■□□□ 1.51
PBX3-209ENST00000491787 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
PBX3-209ENST00000491787 TMC1Q8TDI8 760 aa24.49■■□□□ 1.51
PBX3-209ENST00000491787 TESK2Q96S53 571 aa24.49■■□□□ 1.51
PBX3-209ENST00000491787 EDC4Q6P2E9 1401 aaKnown RBP24.49■■□□□ 1.51
PBX3-209ENST00000491787 LTN1O94822 1766 aa24.48■■□□□ 1.51
PBX3-209ENST00000491787 PTF1AQ7RTS3 328 aa24.48■■□□□ 1.51
PBX3-209ENST00000491787 TERF2IPQ9NYB0 399 aa24.47■■□□□ 1.51
PBX3-209ENST00000491787 EXOC5O00471 708 aa24.46■■□□□ 1.51
PBX3-209ENST00000491787 A0A1W2PP64 1363 aa24.45■■□□□ 1.5
PBX3-209ENST00000491787 ERBB3P21860 1342 aa24.45■■□□□ 1.5
PBX3-209ENST00000491787 SLC24A1O60721 1099 aa24.44■■□□□ 1.5
PBX3-209ENST00000491787 PROM2Q8N271 834 aa24.44■■□□□ 1.5
PBX3-209ENST00000491787 NINLQ9Y2I6 1382 aa24.43■■□□□ 1.5
PBX3-209ENST00000491787 ST20-MTHFSA0A0A6YYL1 179 aa24.43■■□□□ 1.5
PBX3-209ENST00000491787 TNS2Q63HR2 1409 aa24.42■■□□□ 1.5
PBX3-209ENST00000491787 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
PBX3-209ENST00000491787 ANKRD24Q8TF21 1146 aa24.38■■□□□ 1.49
PBX3-209ENST00000491787 KCNQ2O43526 872 aa24.37■■□□□ 1.49
PBX3-209ENST00000491787 IP6K1Q92551 441 aa24.37■■□□□ 1.49
PBX3-209ENST00000491787 ANO8Q9HCE9 1232 aaPredicted RBP24.37■■□□□ 1.49
PBX3-209ENST00000491787 NLRP2Q9NX02 1062 aa24.37■■□□□ 1.49
PBX3-209ENST00000491787 IL2RBP14784 551 aa24.36■■□□□ 1.49
PBX3-209ENST00000491787 SPON1Q9HCB6 807 aa24.36■■□□□ 1.49
PBX3-209ENST00000491787 CASZ1Q86V15 1759 aa24.36■■□□□ 1.49
PBX3-209ENST00000491787 KAT6BQ8WYB5 2073 aa24.35■■□□□ 1.49
PBX3-209ENST00000491787 NHSQ6T4R5 1651 aa24.34■■□□□ 1.49
PBX3-209ENST00000491787 TXNRD1Q16881 649 aa24.33■■□□□ 1.49
PBX3-209ENST00000491787 ANKRD36BQ8N2N9 1353 aa24.31■■□□□ 1.48
PBX3-209ENST00000491787 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
PBX3-209ENST00000491787 COG3Q96JB2 828 aa24.3■■□□□ 1.48
PBX3-209ENST00000491787 PDGFDQ9GZP0 370 aaPredicted RBP24.28■■□□□ 1.48
PBX3-209ENST00000491787 MAP3K19Q56UN5 1328 aa24.28■■□□□ 1.48
PBX3-209ENST00000491787 BTAF1O14981 1849 aa24.27■■□□□ 1.48
PBX3-209ENST00000491787 USP47Q96K76 1375 aa24.27■■□□□ 1.48
PBX3-209ENST00000491787 HOXC9P31274 260 aa24.26■■□□□ 1.47
PBX3-209ENST00000491787 TMF1P82094 1093 aa24.26■■□□□ 1.47
PBX3-209ENST00000491787 SLC15A2Q16348 729 aa24.26■■□□□ 1.47
PBX3-209ENST00000491787 ACSBG1Q96GR2 724 aa24.26■■□□□ 1.47
PBX3-209ENST00000491787 FYB1O15117 783 aa24.25■■□□□ 1.47
PBX3-209ENST00000491787 FBLN1P23142 703 aa24.25■■□□□ 1.47
PBX3-209ENST00000491787 STK32BQ9NY57 414 aa24.24■■□□□ 1.47
PBX3-209ENST00000491787 RGPD2P0DJD1 1756 aa24.24■■□□□ 1.47
PBX3-209ENST00000491787 PPP1R1BQ9UD71 204 aaPredicted RBP24.23■■□□□ 1.47
PBX3-209ENST00000491787 PAPPAQ13219 1627 aa24.22■■□□□ 1.47
PBX3-209ENST00000491787 PTGER2P43116 358 aa24.22■■□□□ 1.47
PBX3-209ENST00000491787 LTV1Q96GA3 475 aaPredicted RBP24.22■■□□□ 1.47
PBX3-209ENST00000491787 AMPHP49418 695 aa24.21■■□□□ 1.47
PBX3-209ENST00000491787 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
PBX3-209ENST00000491787 RTL1A6NKG5 1358 aa24.2■■□□□ 1.46
PBX3-209ENST00000491787 ZBTB7AO95365 584 aa24.19■■□□□ 1.46
PBX3-209ENST00000491787 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
PBX3-209ENST00000491787 SHANK3Q9BYB0 1731 aa24.18■■□□□ 1.46
PBX3-209ENST00000491787 DDX54Q8TDD1 881 aaKnown RBP24.17■■□□□ 1.46
PBX3-209ENST00000491787 GGNBP2Q9H3C7 697 aa24.17■■□□□ 1.46
PBX3-209ENST00000491787 LRRC4BQ9NT99 713 aa24.17■■□□□ 1.46
PBX3-209ENST00000491787 SGIP1Q9BQI5 828 aa24.16■■□□□ 1.46
PBX3-209ENST00000491787 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
PBX3-209ENST00000491787 ZCRB1Q8TBF4 217 aaKnown RBP24.15■■□□□ 1.46
PBX3-209ENST00000491787 MTFR1LQ9H019 292 aa24.15■■□□□ 1.46
PBX3-209ENST00000491787 KIF20BQ96Q89 1820 aa24.14■■□□□ 1.46
PBX3-209ENST00000491787 SLC27A3Q5K4L6 730 aa24.14■■□□□ 1.45
PBX3-209ENST00000491787 NBPF6Q5VWK0 638 aa24.14■■□□□ 1.45
PBX3-209ENST00000491787 NBPF4Q96M43 638 aa24.14■■□□□ 1.45
PBX3-209ENST00000491787 CARD14Q9BXL6 1004 aa24.14■■□□□ 1.45
PBX3-209ENST00000491787 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
PBX3-209ENST00000491787 MYOM1P52179 1685 aa24.14■■□□□ 1.45
PBX3-209ENST00000491787 CLSPNQ9HAW4 1339 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms