RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
TMEM39A-211ENST00000491685 AXIN2Q9Y2T1 843 aa15.66■□□□□ 0.1
TMEM39A-211ENST00000491685 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
TMEM39A-211ENST00000491685 SOX12O15370 315 aa15.65■□□□□ 0.1
TMEM39A-211ENST00000491685 RGPD3A6NKT7 1758 aaPredicted RBP15.64■□□□□ 0.1
TMEM39A-211ENST00000491685 RGPD4Q7Z3J3 1758 aa15.64■□□□□ 0.1
TMEM39A-211ENST00000491685 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
TMEM39A-211ENST00000491685 PDE3BQ13370 1112 aa15.64■□□□□ 0.09
TMEM39A-211ENST00000491685 CAMKK2Q96RR4 588 aa15.64■□□□□ 0.09
TMEM39A-211ENST00000491685 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
TMEM39A-211ENST00000491685 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
TMEM39A-211ENST00000491685 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
TMEM39A-211ENST00000491685 ABCC6O95255 1503 aa15.63■□□□□ 0.09
TMEM39A-211ENST00000491685 APBA3O96018 575 aa15.62■□□□□ 0.09
TMEM39A-211ENST00000491685 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
TMEM39A-211ENST00000491685 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
TMEM39A-211ENST00000491685 WDR17Q8IZU2 1322 aa15.62■□□□□ 0.09
TMEM39A-211ENST00000491685 OVOS2A0A0G2JMS6 1433 aa15.61■□□□□ 0.09
TMEM39A-211ENST00000491685 OVOS2A0A0J9YW53 1432 aa15.61■□□□□ 0.09
TMEM39A-211ENST00000491685 OVOS2Q6IE36 1432 aa15.61■□□□□ 0.09
TMEM39A-211ENST00000491685 YY1P25490 414 aa15.61■□□□□ 0.09
TMEM39A-211ENST00000491685 TOM1L2Q6ZVM7 507 aa15.61■□□□□ 0.09
TMEM39A-211ENST00000491685 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
TMEM39A-211ENST00000491685 NME9Q86XW9 330 aa15.6■□□□□ 0.09
TMEM39A-211ENST00000491685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
TMEM39A-211ENST00000491685 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
TMEM39A-211ENST00000491685 USP31Q70CQ4 1352 aa15.59■□□□□ 0.09
TMEM39A-211ENST00000491685 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.08
TMEM39A-211ENST00000491685 KCNH5Q8NCM2 988 aa15.58■□□□□ 0.08
TMEM39A-211ENST00000491685 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
TMEM39A-211ENST00000491685 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
TMEM39A-211ENST00000491685 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
TMEM39A-211ENST00000491685 DDB1Q16531 1140 aa15.56■□□□□ 0.08
TMEM39A-211ENST00000491685 NHSQ6T4R5 1651 aa15.56■□□□□ 0.08
TMEM39A-211ENST00000491685 RGPD2P0DJD1 1756 aa15.56■□□□□ 0.08
TMEM39A-211ENST00000491685 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
TMEM39A-211ENST00000491685 NINLQ9Y2I6 1382 aa15.55■□□□□ 0.08
TMEM39A-211ENST00000491685 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
TMEM39A-211ENST00000491685 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
TMEM39A-211ENST00000491685 TESK2Q96S53 571 aa15.55■□□□□ 0.08
TMEM39A-211ENST00000491685 TNS2Q63HR2 1409 aa15.54■□□□□ 0.08
TMEM39A-211ENST00000491685 CARD10Q9BWT7 1032 aa15.54■□□□□ 0.08
TMEM39A-211ENST00000491685 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
TMEM39A-211ENST00000491685 ERBB3P21860 1342 aa15.52■□□□□ 0.08
TMEM39A-211ENST00000491685 MYOM1P52179 1685 aa15.52■□□□□ 0.08
TMEM39A-211ENST00000491685 ST20-MTHFSA0A0A6YYL1 179 aa15.52■□□□□ 0.08
TMEM39A-211ENST00000491685 NBPF14Q5TI25 921 aa15.52■□□□□ 0.08
TMEM39A-211ENST00000491685 HDGFL2Q7Z4V5 671 aaPredicted RBP15.52■□□□□ 0.08
TMEM39A-211ENST00000491685 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.07
TMEM39A-211ENST00000491685 BCL9O00512 1426 aa15.51■□□□□ 0.07
TMEM39A-211ENST00000491685 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
TMEM39A-211ENST00000491685 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
TMEM39A-211ENST00000491685 SPON1Q9HCB6 807 aa15.51■□□□□ 0.07
TMEM39A-211ENST00000491685 BTAF1O14981 1849 aa15.51■□□□□ 0.07
TMEM39A-211ENST00000491685 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
TMEM39A-211ENST00000491685 CDCA7Q9BWT1 371 aaPredicted RBP15.49■□□□□ 0.07
TMEM39A-211ENST00000491685 ANO8Q9HCE9 1232 aaPredicted RBP15.49■□□□□ 0.07
TMEM39A-211ENST00000491685 PPP1R1BQ9UD71 204 aaPredicted RBP15.49■□□□□ 0.07
TMEM39A-211ENST00000491685 KCNQ2O43526 872 aa15.48■□□□□ 0.07
TMEM39A-211ENST00000491685 PUS7Q96PZ0 661 aaKnown RBP15.48■□□□□ 0.07
TMEM39A-211ENST00000491685 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
TMEM39A-211ENST00000491685 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
TMEM39A-211ENST00000491685 CHD4Q14839 1912 aa15.48■□□□□ 0.07
TMEM39A-211ENST00000491685 USP47Q96K76 1375 aa15.48■□□□□ 0.07
TMEM39A-211ENST00000491685 PAPPAQ13219 1627 aa15.47■□□□□ 0.07
TMEM39A-211ENST00000491685 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
TMEM39A-211ENST00000491685 PROM2Q8N271 834 aa15.47■□□□□ 0.07
TMEM39A-211ENST00000491685 DOT1LQ8TEK3 1739 aa15.47■□□□□ 0.07
TMEM39A-211ENST00000491685 ANKRD24Q8TF21 1146 aa15.47■□□□□ 0.07
TMEM39A-211ENST00000491685 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
TMEM39A-211ENST00000491685 PLSCR1O15162 318 aa15.46■□□□□ 0.07
TMEM39A-211ENST00000491685 FBLN1P23142 703 aa15.46■□□□□ 0.07
TMEM39A-211ENST00000491685 EXOC5O00471 708 aa15.45■□□□□ 0.06
TMEM39A-211ENST00000491685 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
TMEM39A-211ENST00000491685 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
TMEM39A-211ENST00000491685 PDGFDQ9GZP0 370 aaPredicted RBP15.44■□□□□ 0.06
TMEM39A-211ENST00000491685 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
TMEM39A-211ENST00000491685 IL2RBP14784 551 aa15.43■□□□□ 0.06
TMEM39A-211ENST00000491685 LTV1Q96GA3 475 aaPredicted RBP15.43■□□□□ 0.06
TMEM39A-211ENST00000491685 ACSBG1Q96GR2 724 aa15.43■□□□□ 0.06
TMEM39A-211ENST00000491685 KAT6BQ8WYB5 2073 aa15.43■□□□□ 0.06
TMEM39A-211ENST00000491685 IP6K1Q92551 441 aa15.42■□□□□ 0.06
TMEM39A-211ENST00000491685 TUBGCP6Q96RT7 1819 aa15.42■□□□□ 0.06
TMEM39A-211ENST00000491685 MEGF6O75095 1541 aa15.42■□□□□ 0.06
TMEM39A-211ENST00000491685 TXNRD1Q16881 649 aa15.41■□□□□ 0.06
TMEM39A-211ENST00000491685 UTRNP46939 3433 aa15.4■□□□□ 0.06
TMEM39A-211ENST00000491685 HOXC9P31274 260 aa15.4■□□□□ 0.06
TMEM39A-211ENST00000491685 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
TMEM39A-211ENST00000491685 COG3Q96JB2 828 aa15.4■□□□□ 0.06
TMEM39A-211ENST00000491685 TMF1P82094 1093 aa15.39■□□□□ 0.05
TMEM39A-211ENST00000491685 LY75O60449 1722 aa15.39■□□□□ 0.05
TMEM39A-211ENST00000491685 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
TMEM39A-211ENST00000491685 RRS1Q15050 365 aaKnown RBP15.38■□□□□ 0.05
TMEM39A-211ENST00000491685 GGNBP2Q9H3C7 697 aa15.38■□□□□ 0.05
TMEM39A-211ENST00000491685 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
TMEM39A-211ENST00000491685 QSER1Q2KHR3 1735 aa15.37■□□□□ 0.05
TMEM39A-211ENST00000491685 FYB1O15117 783 aa15.37■□□□□ 0.05
TMEM39A-211ENST00000491685 ZNF784Q8NCA9 323 aaPredicted RBP15.37■□□□□ 0.05
TMEM39A-211ENST00000491685 TOGARAM1Q9Y4F4 1720 aa15.35■□□□□ 0.05
TMEM39A-211ENST00000491685 ZBTB7AO95365 584 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms