RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 ST20-MTHFSA0A0A6YYL1 179 aa12.18□□□□□ -0.46
GABRE-211ENST00000491339 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
GABRE-211ENST00000491339 KIF20BQ96Q89 1820 aa12.17□□□□□ -0.46
GABRE-211ENST00000491339 CRB1P82279 1406 aa12.17□□□□□ -0.46
GABRE-211ENST00000491339 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
GABRE-211ENST00000491339 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
GABRE-211ENST00000491339 TMF1P82094 1093 aa12.16□□□□□ -0.46
GABRE-211ENST00000491339 LRRC37A3O60309 1634 aa12.16□□□□□ -0.46
GABRE-211ENST00000491339 MYOM1P52179 1685 aa12.16□□□□□ -0.46
GABRE-211ENST00000491339 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
GABRE-211ENST00000491339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
GABRE-211ENST00000491339 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.46
GABRE-211ENST00000491339 TESK2Q96S53 571 aa12.15□□□□□ -0.46
GABRE-211ENST00000491339 USP35Q9P2H5 1018 aa12.15□□□□□ -0.46
GABRE-211ENST00000491339 USP31Q70CQ4 1352 aa12.15□□□□□ -0.46
GABRE-211ENST00000491339 CDCA8Q53HL2 280 aa12.15□□□□□ -0.46
GABRE-211ENST00000491339 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
GABRE-211ENST00000491339 SOX12O15370 315 aa12.14□□□□□ -0.47
GABRE-211ENST00000491339 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
GABRE-211ENST00000491339 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
GABRE-211ENST00000491339 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
GABRE-211ENST00000491339 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
GABRE-211ENST00000491339 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
GABRE-211ENST00000491339 ANKRD36BQ8N2N9 1353 aa12.13□□□□□ -0.47
GABRE-211ENST00000491339 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
GABRE-211ENST00000491339 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
GABRE-211ENST00000491339 BAG6P46379 1132 aa12.12□□□□□ -0.47
GABRE-211ENST00000491339 TOM1L2Q6ZVM7 507 aa12.12□□□□□ -0.47
GABRE-211ENST00000491339 NME9Q86XW9 330 aa12.12□□□□□ -0.47
GABRE-211ENST00000491339 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
GABRE-211ENST00000491339 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
GABRE-211ENST00000491339 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
GABRE-211ENST00000491339 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
GABRE-211ENST00000491339 FAM196AQ6ZSG2 479 aa12.09□□□□□ -0.47
GABRE-211ENST00000491339 CCDC7Q96M83 1385 aa12.09□□□□□ -0.47
GABRE-211ENST00000491339 OVOS2A0A0G2JMS6 1433 aa12.09□□□□□ -0.47
GABRE-211ENST00000491339 DISP2A7MBM2 1401 aa12.09□□□□□ -0.47
GABRE-211ENST00000491339 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
GABRE-211ENST00000491339 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
GABRE-211ENST00000491339 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
GABRE-211ENST00000491339 PEAK1Q9H792 1746 aa12.09□□□□□ -0.47
GABRE-211ENST00000491339 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.47
GABRE-211ENST00000491339 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.47
GABRE-211ENST00000491339 COG3Q96JB2 828 aa12.08□□□□□ -0.48
GABRE-211ENST00000491339 RREB1Q92766 1687 aa12.08□□□□□ -0.48
GABRE-211ENST00000491339 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
GABRE-211ENST00000491339 FAM182BQ5T319 152 aa12.07□□□□□ -0.48
GABRE-211ENST00000491339 DEFB132Q7Z7B7 95 aa12.07□□□□□ -0.48
GABRE-211ENST00000491339 ERBB3P21860 1342 aa12.06□□□□□ -0.48
GABRE-211ENST00000491339 DDB1Q16531 1140 aa12.06□□□□□ -0.48
GABRE-211ENST00000491339 CARD10Q9BWT7 1032 aa12.06□□□□□ -0.48
GABRE-211ENST00000491339 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
GABRE-211ENST00000491339 TNS2Q63HR2 1409 aa12.06□□□□□ -0.48
GABRE-211ENST00000491339 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
GABRE-211ENST00000491339 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
GABRE-211ENST00000491339 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
GABRE-211ENST00000491339 NUP188Q5SRE5 1749 aa12.05□□□□□ -0.48
GABRE-211ENST00000491339 EIF4G2P78344 907 aaKnown RBP eCLIP12.04□□□□□ -0.48
GABRE-211ENST00000491339 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
GABRE-211ENST00000491339 NSD3Q9BZ95 1437 aa12.04□□□□□ -0.48
GABRE-211ENST00000491339 TRIM37O94972 964 aa12.04□□□□□ -0.48
GABRE-211ENST00000491339 RGPD2P0DJD1 1756 aa12.03□□□□□ -0.48
GABRE-211ENST00000491339 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
GABRE-211ENST00000491339 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.48
GABRE-211ENST00000491339 NLRP2Q9NX02 1062 aa12.02□□□□□ -0.48
GABRE-211ENST00000491339 LRP5O75197 1615 aa12.02□□□□□ -0.49
GABRE-211ENST00000491339 AMPHP49418 695 aa12.01□□□□□ -0.49
GABRE-211ENST00000491339 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
GABRE-211ENST00000491339 POLR3GLQ9BT43 218 aa12.01□□□□□ -0.49
GABRE-211ENST00000491339 APBA3O96018 575 aa12.01□□□□□ -0.49
GABRE-211ENST00000491339 IP6K1Q92551 441 aa12.01□□□□□ -0.49
GABRE-211ENST00000491339 MAP3K19Q56UN5 1328 aa12□□□□□ -0.49
GABRE-211ENST00000491339 BCL9O00512 1426 aa12□□□□□ -0.49
GABRE-211ENST00000491339 GGNBP2Q9H3C7 697 aa12□□□□□ -0.49
GABRE-211ENST00000491339 EXOC5O00471 708 aa11.99□□□□□ -0.49
GABRE-211ENST00000491339 IL2RBP14784 551 aa11.99□□□□□ -0.49
GABRE-211ENST00000491339 CGNL1Q0VF96 1302 aa11.99□□□□□ -0.49
GABRE-211ENST00000491339 MAP2P11137 1827 aaKnown RBP11.99□□□□□ -0.49
GABRE-211ENST00000491339 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
GABRE-211ENST00000491339 HOXC9P31274 260 aa11.99□□□□□ -0.49
GABRE-211ENST00000491339 KIF24Q5T7B8 1368 aa11.99□□□□□ -0.49
GABRE-211ENST00000491339 FLT4P35916 1363 aa11.98□□□□□ -0.49
GABRE-211ENST00000491339 FYB1O15117 783 aa11.98□□□□□ -0.49
GABRE-211ENST00000491339 LTV1Q96GA3 475 aaPredicted RBP11.98□□□□□ -0.49
GABRE-211ENST00000491339 DOT1LQ8TEK3 1739 aa11.98□□□□□ -0.49
GABRE-211ENST00000491339 SHANK3Q9BYB0 1731 aa11.98□□□□□ -0.49
GABRE-211ENST00000491339 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
GABRE-211ENST00000491339 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
GABRE-211ENST00000491339 BTAF1O14981 1849 aa11.97□□□□□ -0.49
GABRE-211ENST00000491339 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
GABRE-211ENST00000491339 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
GABRE-211ENST00000491339 DCAF8L1A6NGE4 600 aa11.96□□□□□ -0.5
GABRE-211ENST00000491339 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.5
GABRE-211ENST00000491339 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.5
GABRE-211ENST00000491339 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
GABRE-211ENST00000491339 NSD2O96028 1365 aa11.95□□□□□ -0.5
GABRE-211ENST00000491339 INSRP06213 1382 aa11.95□□□□□ -0.5
GABRE-211ENST00000491339 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
GABRE-211ENST00000491339 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
GABRE-211ENST00000491339 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms