RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 IP6K1Q92551 441 aa24.72■■□□□ 1.55
PRDM2-209ENST00000491134 AXIN2Q9Y2T1 843 aa24.72■■□□□ 1.55
PRDM2-209ENST00000491134 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
PRDM2-209ENST00000491134 INSRP06213 1382 aa24.71■■□□□ 1.55
PRDM2-209ENST00000491134 HOXC9P31274 260 aa24.71■■□□□ 1.55
PRDM2-209ENST00000491134 NRAPQ86VF7 1730 aa24.71■■□□□ 1.55
PRDM2-209ENST00000491134 FLT4P35916 1363 aa24.7■■□□□ 1.55
PRDM2-209ENST00000491134 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.54
PRDM2-209ENST00000491134 MTHFSP49914 203 aa24.7■■□□□ 1.54
PRDM2-209ENST00000491134 ANP32CO43423 234 aa24.69■■□□□ 1.54
PRDM2-209ENST00000491134 COL3A1P02461 1466 aaPredicted RBP24.69■■□□□ 1.54
PRDM2-209ENST00000491134 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
PRDM2-209ENST00000491134 FNBP4Q8N3X1 1017 aaPredicted RBP24.68■■□□□ 1.54
PRDM2-209ENST00000491134 AMPHP49418 695 aa24.67■■□□□ 1.54
PRDM2-209ENST00000491134 HSP90AB2PQ58FF8 381 aa24.67■■□□□ 1.54
PRDM2-209ENST00000491134 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
PRDM2-209ENST00000491134 BCL9LQ86UU0 1499 aa24.66■■□□□ 1.54
PRDM2-209ENST00000491134 COL5A2P05997 1499 aaPredicted RBP24.65■■□□□ 1.54
PRDM2-209ENST00000491134 ZBTB7CA1YPR0 619 aa24.65■■□□□ 1.54
PRDM2-209ENST00000491134 C8orf37Q96NL8 207 aa24.64■■□□□ 1.54
PRDM2-209ENST00000491134 PPM1GO15355 546 aaPredicted RBP24.63■■□□□ 1.53
PRDM2-209ENST00000491134 BTG4Q9NY30 223 aa24.63■■□□□ 1.53
PRDM2-209ENST00000491134 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
PRDM2-209ENST00000491134 NGLY1Q96IV0 654 aa24.62■■□□□ 1.53
PRDM2-209ENST00000491134 ERBB3P21860 1342 aa24.61■■□□□ 1.53
PRDM2-209ENST00000491134 MEX3CQ5U5Q3 659 aaKnown RBP24.61■■□□□ 1.53
PRDM2-209ENST00000491134 FAM208AQ9UK61 1670 aaKnown RBP24.61■■□□□ 1.53
PRDM2-209ENST00000491134 RGPD1P0DJD0 1748 aa24.6■■□□□ 1.53
PRDM2-209ENST00000491134 AFF2P51816 1311 aa24.6■■□□□ 1.53
PRDM2-209ENST00000491134 EIF4A2Q14240 407 aaKnown RBP24.59■■□□□ 1.53
PRDM2-209ENST00000491134 CCDC184Q52MB2 194 aa24.58■■□□□ 1.53
PRDM2-209ENST00000491134 UNC5CLQ8IV45 518 aa24.58■■□□□ 1.53
PRDM2-209ENST00000491134 ANKRD24Q8TF21 1146 aa24.58■■□□□ 1.53
PRDM2-209ENST00000491134 IL13P35225 146 aa24.57■■□□□ 1.52
PRDM2-209ENST00000491134 WDR17Q8IZU2 1322 aa24.57■■□□□ 1.52
PRDM2-209ENST00000491134 NCAPD2Q15021 1401 aa24.56■■□□□ 1.52
PRDM2-209ENST00000491134 MIER1Q8N108 512 aa24.55■■□□□ 1.52
PRDM2-209ENST00000491134 LARP1Q6PKG0 1096 aaKnown RBP24.54■■□□□ 1.52
PRDM2-209ENST00000491134 USP21Q9UK80 565 aa24.54■■□□□ 1.52
PRDM2-209ENST00000491134 ATRNO75882 1429 aa24.53■■□□□ 1.52
PRDM2-209ENST00000491134 LTV1Q96GA3 475 aaPredicted RBP24.53■■□□□ 1.52
PRDM2-209ENST00000491134 CFAP53Q96M91 514 aa24.53■■□□□ 1.52
PRDM2-209ENST00000491134 RGS17Q9UGC6 210 aaPredicted RBP24.53■■□□□ 1.52
PRDM2-209ENST00000491134 CRB1P82279 1406 aa24.52■■□□□ 1.52
PRDM2-209ENST00000491134 DIAPH1O60610 1272 aaKnown RBP24.52■■□□□ 1.52
PRDM2-209ENST00000491134 STRN4Q9NRL3 753 aa24.52■■□□□ 1.52
PRDM2-209ENST00000491134 VPS72Q15906 364 aa24.51■■□□□ 1.51
PRDM2-209ENST00000491134 NBPF6Q5VWK0 638 aa24.51■■□□□ 1.51
PRDM2-209ENST00000491134 NBPF4Q96M43 638 aa24.51■■□□□ 1.51
PRDM2-209ENST00000491134 EYA1Q99502 592 aa24.51■■□□□ 1.51
PRDM2-209ENST00000491134 EVA1CP58658 441 aa24.5■■□□□ 1.51
PRDM2-209ENST00000491134 SPATA31A5Q5VU36 1347 aa24.5■■□□□ 1.51
PRDM2-209ENST00000491134 SPATA31A7Q8IWB4 1347 aa24.5■■□□□ 1.51
PRDM2-209ENST00000491134 IGSF1Q8N6C5 1336 aa24.5■■□□□ 1.51
PRDM2-209ENST00000491134 CARD10Q9BWT7 1032 aa24.49■■□□□ 1.51
PRDM2-209ENST00000491134 CCER2I3L3R5 266 aa24.48■■□□□ 1.51
PRDM2-209ENST00000491134 GLI3P10071 1580 aa24.48■■□□□ 1.51
PRDM2-209ENST00000491134 SPATA31A1Q5TZJ5 1347 aa24.48■■□□□ 1.51
PRDM2-209ENST00000491134 WNK3Q9BYP7 1800 aa24.47■■□□□ 1.51
PRDM2-209ENST00000491134 KDRP35968 1356 aa24.46■■□□□ 1.51
PRDM2-209ENST00000491134 CSB-PGBD3P0DP91 1061 aa24.46■■□□□ 1.51
PRDM2-209ENST00000491134 ZNF772Q68DY9 489 aaPredicted RBP24.46■■□□□ 1.51
PRDM2-209ENST00000491134 TOM1L2Q6ZVM7 507 aa24.46■■□□□ 1.51
PRDM2-209ENST00000491134 NLRP2Q9NX02 1062 aa24.45■■□□□ 1.5
PRDM2-209ENST00000491134 TRPC5Q9UL62 973 aaPredicted RBP24.45■■□□□ 1.5
PRDM2-209ENST00000491134 QTRT2Q9H974 415 aaKnown RBP24.44■■□□□ 1.5
PRDM2-209ENST00000491134 MRS2Q9HD23 443 aa24.44■■□□□ 1.5
PRDM2-209ENST00000491134 DISP2A7MBM2 1401 aa24.44■■□□□ 1.5
PRDM2-209ENST00000491134 PNISRQ8TF01 805 aaKnown RBP24.43■■□□□ 1.5
PRDM2-209ENST00000491134 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
PRDM2-209ENST00000491134 GJD4Q96KN9 370 aaPredicted RBP24.42■■□□□ 1.5
PRDM2-209ENST00000491134 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
PRDM2-209ENST00000491134 AEBP1Q8IUX7 1158 aa24.41■■□□□ 1.5
PRDM2-209ENST00000491134 POTEAQ6S8J7 498 aa24.4■■□□□ 1.5
PRDM2-209ENST00000491134 TCP11L2Q8N4U5 519 aa24.4■■□□□ 1.5
PRDM2-209ENST00000491134 THRAP3Q9Y2W1 955 aaKnown RBP24.4■■□□□ 1.5
PRDM2-209ENST00000491134 THSD7AQ9UPZ6 1657 aa24.4■■□□□ 1.5
PRDM2-209ENST00000491134 U2SURPO15042 1029 aaKnown RBP24.39■■□□□ 1.49
PRDM2-209ENST00000491134 BARGINQ6ZT62 677 aa24.39■■□□□ 1.49
PRDM2-209ENST00000491134 MEGF6O75095 1541 aa24.39■■□□□ 1.49
PRDM2-209ENST00000491134 ONECUT3O60422 494 aaPredicted RBP24.38■■□□□ 1.49
PRDM2-209ENST00000491134 SULT6B1Q6IMI4 303 aa24.38■■□□□ 1.49
PRDM2-209ENST00000491134 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
PRDM2-209ENST00000491134 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
PRDM2-209ENST00000491134 RSPH6AQ9H0K4 717 aa24.37■■□□□ 1.49
PRDM2-209ENST00000491134 USP35Q9P2H5 1018 aa24.37■■□□□ 1.49
PRDM2-209ENST00000491134 PARP4Q9UKK3 1724 aaKnown RBP24.37■■□□□ 1.49
PRDM2-209ENST00000491134 HMOX1P09601 288 aa24.36■■□□□ 1.49
PRDM2-209ENST00000491134 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
PRDM2-209ENST00000491134 ADAMTS8Q9UP79 889 aa24.36■■□□□ 1.49
PRDM2-209ENST00000491134 CCDC9Q9Y3X0 531 aaKnown RBP24.36■■□□□ 1.49
PRDM2-209ENST00000491134 PLEKHG2Q9H7P9 1386 aa24.36■■□□□ 1.49
PRDM2-209ENST00000491134 PKD1L3Q7Z443 1732 aa24.35■■□□□ 1.49
PRDM2-209ENST00000491134 FCHSD2O94868 740 aa24.35■■□□□ 1.49
PRDM2-209ENST00000491134 SHANK3Q9BYB0 1731 aa24.35■■□□□ 1.49
PRDM2-209ENST00000491134 OVOS2A0A0G2JMS6 1433 aa24.35■■□□□ 1.49
PRDM2-209ENST00000491134 RBM6P78332 1123 aaKnown RBP24.34■■□□□ 1.49
PRDM2-209ENST00000491134 IL2RBP14784 551 aa24.33■■□□□ 1.49
PRDM2-209ENST00000491134 LRRC37A3O60309 1634 aa24.32■■□□□ 1.48
PRDM2-209ENST00000491134 WDR43Q15061 677 aaKnown RBP eCLIP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms