RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CRYBG1Q9Y4K1 1723 aa14.69□□□□□ -0.06
VARS2-210ENST00000490699 SMG6Q86US8 1419 aaKnown RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 NUTM2BA6NNL0 878 aaPredicted RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 NUTM2EB1AL46 878 aaPredicted RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 MTHFSP49914 203 aa14.69□□□□□ -0.06
VARS2-210ENST00000490699 ZC3H6P61129 1189 aaKnown RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 RRS1Q15050 365 aaKnown RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 MEX3CQ5U5Q3 659 aaKnown RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 NUTM2AQ8IVF1 878 aaPredicted RBP14.69□□□□□ -0.06
VARS2-210ENST00000490699 NFAT5O94916 1531 aa14.69□□□□□ -0.06
VARS2-210ENST00000490699 FLT4P35916 1363 aa14.69□□□□□ -0.06
VARS2-210ENST00000490699 ABCC6O95255 1503 aa14.68□□□□□ -0.06
VARS2-210ENST00000490699 CCER2I3L3R5 266 aa14.68□□□□□ -0.06
VARS2-210ENST00000490699 CPDO75976 1380 aa14.68□□□□□ -0.06
VARS2-210ENST00000490699 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
VARS2-210ENST00000490699 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
VARS2-210ENST00000490699 MIER1Q8N108 512 aa14.67□□□□□ -0.06
VARS2-210ENST00000490699 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
VARS2-210ENST00000490699 ZNF219Q9P2Y4 722 aaPredicted RBP14.67□□□□□ -0.06
VARS2-210ENST00000490699 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
VARS2-210ENST00000490699 NUDCQ9Y266 331 aa14.67□□□□□ -0.06
VARS2-210ENST00000490699 KIAA0232Q92628 1395 aa14.67□□□□□ -0.06
VARS2-210ENST00000490699 ARHGEF25Q86VW2 580 aa14.66□□□□□ -0.06
VARS2-210ENST00000490699 EMILIN1Q9Y6C2 1016 aa14.66□□□□□ -0.06
VARS2-210ENST00000490699 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
VARS2-210ENST00000490699 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
VARS2-210ENST00000490699 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
VARS2-210ENST00000490699 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
VARS2-210ENST00000490699 COL14A1Q05707 1796 aaKnown RBP14.65□□□□□ -0.06
VARS2-210ENST00000490699 DIAPH1O60610 1272 aaKnown RBP14.64□□□□□ -0.07
VARS2-210ENST00000490699 IP6K1Q92551 441 aa14.64□□□□□ -0.07
VARS2-210ENST00000490699 INSRP06213 1382 aa14.63□□□□□ -0.07
VARS2-210ENST00000490699 CSB-PGBD3P0DP91 1061 aa14.63□□□□□ -0.07
VARS2-210ENST00000490699 FBLN1P23142 703 aa14.63□□□□□ -0.07
VARS2-210ENST00000490699 HOXC9P31274 260 aa14.63□□□□□ -0.07
VARS2-210ENST00000490699 EVA1CP58658 441 aa14.62□□□□□ -0.07
VARS2-210ENST00000490699 CHRNA2Q15822 529 aa14.62□□□□□ -0.07
VARS2-210ENST00000490699 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
VARS2-210ENST00000490699 NEFMP07197 916 aa14.61□□□□□ -0.07
VARS2-210ENST00000490699 NGLY1Q96IV0 654 aa14.61□□□□□ -0.07
VARS2-210ENST00000490699 U2SURPO15042 1029 aaKnown RBP14.6□□□□□ -0.07
VARS2-210ENST00000490699 LTV1Q96GA3 475 aaPredicted RBP14.6□□□□□ -0.07
VARS2-210ENST00000490699 C8orf37Q96NL8 207 aa14.6□□□□□ -0.07
VARS2-210ENST00000490699 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
VARS2-210ENST00000490699 FAM208AQ9UK61 1670 aaKnown RBP14.6□□□□□ -0.07
VARS2-210ENST00000490699 PEAK1Q9H792 1746 aa14.6□□□□□ -0.07
VARS2-210ENST00000490699 HSP90AB2PQ58FF8 381 aa14.59□□□□□ -0.07
VARS2-210ENST00000490699 ANKRD24Q8TF21 1146 aa14.59□□□□□ -0.07
VARS2-210ENST00000490699 PLCH1Q4KWH8 1693 aa14.58□□□□□ -0.07
VARS2-210ENST00000490699 BTG4Q9NY30 223 aa14.58□□□□□ -0.08
VARS2-210ENST00000490699 NWD2Q9ULI1 1742 aa14.58□□□□□ -0.08
VARS2-210ENST00000490699 FAM83GA6ND36 823 aa14.57□□□□□ -0.08
VARS2-210ENST00000490699 U2AF1L5P0DN76 240 aaPredicted RBP14.57□□□□□ -0.08
VARS2-210ENST00000490699 U2AF1Q01081 240 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS2-210ENST00000490699 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
VARS2-210ENST00000490699 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
VARS2-210ENST00000490699 LMO7Q8WWI1 1683 aa14.57□□□□□ -0.08
VARS2-210ENST00000490699 COL18A1P39060 1754 aa14.56□□□□□ -0.08
VARS2-210ENST00000490699 RGPD5Q99666 1765 aa14.56□□□□□ -0.08
VARS2-210ENST00000490699 EIF4A2Q14240 407 aaKnown RBP14.56□□□□□ -0.08
VARS2-210ENST00000490699 TOM1L2Q6ZVM7 507 aa14.56□□□□□ -0.08
VARS2-210ENST00000490699 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
VARS2-210ENST00000490699 ERBB3P21860 1342 aa14.56□□□□□ -0.08
VARS2-210ENST00000490699 COL3A1P02461 1466 aaPredicted RBP14.56□□□□□ -0.08
VARS2-210ENST00000490699 COL5A2P05997 1499 aaPredicted RBP14.56□□□□□ -0.08
VARS2-210ENST00000490699 LRP6O75581 1613 aa14.55□□□□□ -0.08
VARS2-210ENST00000490699 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
VARS2-210ENST00000490699 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
VARS2-210ENST00000490699 WDR17Q8IZU2 1322 aa14.55□□□□□ -0.08
VARS2-210ENST00000490699 IL13P35225 146 aa14.54□□□□□ -0.08
VARS2-210ENST00000490699 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
VARS2-210ENST00000490699 CAMTA1Q9Y6Y1 1673 aa14.54□□□□□ -0.08
VARS2-210ENST00000490699 MAPK8IP3Q9UPT6 1336 aa14.53□□□□□ -0.08
VARS2-210ENST00000490699 USP21Q9UK80 565 aa14.53□□□□□ -0.08
VARS2-210ENST00000490699 CRB1P82279 1406 aa14.52□□□□□ -0.08
VARS2-210ENST00000490699 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
VARS2-210ENST00000490699 PNISRQ8TF01 805 aaKnown RBP14.52□□□□□ -0.09
VARS2-210ENST00000490699 SLIT2O94813 1529 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 AFF2P51816 1311 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 IGSF1Q8N6C5 1336 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 FCHSD2O94868 740 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 CCDC184Q52MB2 194 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 SULT6B1Q6IMI4 303 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 FNBP4Q8N3X1 1017 aaPredicted RBP14.51□□□□□ -0.09
VARS2-210ENST00000490699 RAPGEF4Q8WZA2 1011 aa14.51□□□□□ -0.09
VARS2-210ENST00000490699 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.51□□□□□ -0.09
VARS2-210ENST00000490699 NRAPQ86VF7 1730 aa14.5□□□□□ -0.09
VARS2-210ENST00000490699 ZNF772Q68DY9 489 aaPredicted RBP14.5□□□□□ -0.09
VARS2-210ENST00000490699 EYA1Q99502 592 aa14.5□□□□□ -0.09
VARS2-210ENST00000490699 CARD10Q9BWT7 1032 aa14.5□□□□□ -0.09
VARS2-210ENST00000490699 HMOX1P09601 288 aa14.49□□□□□ -0.09
VARS2-210ENST00000490699 LARP1Q6PKG0 1096 aaKnown RBP14.49□□□□□ -0.09
VARS2-210ENST00000490699 TRPC5Q9UL62 973 aaPredicted RBP14.49□□□□□ -0.09
VARS2-210ENST00000490699 RGPD1P0DJD0 1748 aa14.49□□□□□ -0.09
VARS2-210ENST00000490699 TATP17735 454 aaPredicted RBP14.48□□□□□ -0.09
VARS2-210ENST00000490699 VPS72Q15906 364 aa14.48□□□□□ -0.09
VARS2-210ENST00000490699 NBPF6Q5VWK0 638 aa14.48□□□□□ -0.09
VARS2-210ENST00000490699 NBPF4Q96M43 638 aa14.48□□□□□ -0.09
VARS2-210ENST00000490699 CDCA7Q9BWT1 371 aaPredicted RBP14.48□□□□□ -0.09
VARS2-210ENST00000490699 USP35Q9P2H5 1018 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms