RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 NSD3Q9BZ95 1437 aa23.51■■□□□ 1.35
RAPGEF3-212ENST00000490387 TTC21AQ8NDW8 1320 aa23.51■■□□□ 1.35
RAPGEF3-212ENST00000490387 LARP1Q6PKG0 1096 aaKnown RBP23.5■■□□□ 1.35
RAPGEF3-212ENST00000490387 KIF20BQ96Q89 1820 aa23.49■■□□□ 1.35
RAPGEF3-212ENST00000490387 COL5A2P05997 1499 aaPredicted RBP23.49■■□□□ 1.35
RAPGEF3-212ENST00000490387 DEFB132Q7Z7B7 95 aa23.48■■□□□ 1.35
RAPGEF3-212ENST00000490387 ZRANB1Q9UGI0 708 aa23.48■■□□□ 1.35
RAPGEF3-212ENST00000490387 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
RAPGEF3-212ENST00000490387 FAM182BQ5T319 152 aa23.47■■□□□ 1.35
RAPGEF3-212ENST00000490387 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
RAPGEF3-212ENST00000490387 AATKQ6ZMQ8 1374 aa23.46■■□□□ 1.35
RAPGEF3-212ENST00000490387 BARGINQ6ZT62 677 aa23.46■■□□□ 1.35
RAPGEF3-212ENST00000490387 TCP11L2Q8N4U5 519 aa23.46■■□□□ 1.35
RAPGEF3-212ENST00000490387 KCNH5Q8NCM2 988 aa23.46■■□□□ 1.35
RAPGEF3-212ENST00000490387 USP31Q70CQ4 1352 aa23.45■■□□□ 1.34
RAPGEF3-212ENST00000490387 SOX12O15370 315 aa23.45■■□□□ 1.34
RAPGEF3-212ENST00000490387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.45■■□□□ 1.34
RAPGEF3-212ENST00000490387 COL18A1P39060 1754 aa23.45■■□□□ 1.34
RAPGEF3-212ENST00000490387 NME9Q86XW9 330 aa23.44■■□□□ 1.34
RAPGEF3-212ENST00000490387 OVOS2A0A0J9YW53 1432 aa23.43■■□□□ 1.34
RAPGEF3-212ENST00000490387 CRB1P82279 1406 aa23.43■■□□□ 1.34
RAPGEF3-212ENST00000490387 OVOS2Q6IE36 1432 aa23.43■■□□□ 1.34
RAPGEF3-212ENST00000490387 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
RAPGEF3-212ENST00000490387 THRAP3Q9Y2W1 955 aaKnown RBP23.43■■□□□ 1.34
RAPGEF3-212ENST00000490387 FYB1O15117 783 aa23.42■■□□□ 1.34
RAPGEF3-212ENST00000490387 BAG6P46379 1132 aa23.42■■□□□ 1.34
RAPGEF3-212ENST00000490387 RGPD5Q99666 1765 aa23.42■■□□□ 1.34
RAPGEF3-212ENST00000490387 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
RAPGEF3-212ENST00000490387 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
RAPGEF3-212ENST00000490387 NFAT5O94916 1531 aa23.4■■□□□ 1.34
RAPGEF3-212ENST00000490387 PARP4Q9UKK3 1724 aaKnown RBP23.4■■□□□ 1.34
RAPGEF3-212ENST00000490387 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
RAPGEF3-212ENST00000490387 ARHGEF25Q86VW2 580 aa23.4■■□□□ 1.34
RAPGEF3-212ENST00000490387 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.34
RAPGEF3-212ENST00000490387 AMER1Q5JTC6 1135 aaPredicted RBP23.39■■□□□ 1.33
RAPGEF3-212ENST00000490387 TOM1L2Q6ZVM7 507 aa23.39■■□□□ 1.33
RAPGEF3-212ENST00000490387 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
RAPGEF3-212ENST00000490387 FAM196AQ6ZSG2 479 aa23.38■■□□□ 1.33
RAPGEF3-212ENST00000490387 NSD2O96028 1365 aa23.38■■□□□ 1.33
RAPGEF3-212ENST00000490387 NPC1L1Q9UHC9 1359 aa23.38■■□□□ 1.33
RAPGEF3-212ENST00000490387 AXIN2Q9Y2T1 843 aa23.37■■□□□ 1.33
RAPGEF3-212ENST00000490387 WNK3Q9BYP7 1800 aa23.36■■□□□ 1.33
RAPGEF3-212ENST00000490387 GGNBP2Q9H3C7 697 aa23.36■■□□□ 1.33
RAPGEF3-212ENST00000490387 WDR17Q8IZU2 1322 aa23.35■■□□□ 1.33
RAPGEF3-212ENST00000490387 LTN1O94822 1766 aa23.35■■□□□ 1.33
RAPGEF3-212ENST00000490387 ABCC6O95255 1503 aa23.34■■□□□ 1.33
RAPGEF3-212ENST00000490387 TRIM37O94972 964 aa23.34■■□□□ 1.33
RAPGEF3-212ENST00000490387 CSB-PGBD3P0DP91 1061 aa23.34■■□□□ 1.33
RAPGEF3-212ENST00000490387 EN1Q05925 392 aaPredicted RBP23.33■■□□□ 1.33
RAPGEF3-212ENST00000490387 LRRC37A3O60309 1634 aa23.33■■□□□ 1.32
RAPGEF3-212ENST00000490387 DISP2A7MBM2 1401 aa23.33■■□□□ 1.32
RAPGEF3-212ENST00000490387 COG3Q96JB2 828 aa23.32■■□□□ 1.32
RAPGEF3-212ENST00000490387 DDB1Q16531 1140 aa23.28■■□□□ 1.32
RAPGEF3-212ENST00000490387 CARD10Q9BWT7 1032 aa23.28■■□□□ 1.32
RAPGEF3-212ENST00000490387 APBA3O96018 575 aa23.27■■□□□ 1.32
RAPGEF3-212ENST00000490387 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
RAPGEF3-212ENST00000490387 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF3-212ENST00000490387 PEAK1Q9H792 1746 aa23.25■■□□□ 1.31
RAPGEF3-212ENST00000490387 EZH2Q15910 746 aaKnown RBP23.25■■□□□ 1.31
RAPGEF3-212ENST00000490387 CC2D1BQ5T0F9 858 aaKnown RBP23.25■■□□□ 1.31
RAPGEF3-212ENST00000490387 MAP2P11137 1827 aaKnown RBP23.23■■□□□ 1.31
RAPGEF3-212ENST00000490387 SBF2Q86WG5 1849 aa23.23■■□□□ 1.31
RAPGEF3-212ENST00000490387 ERBB3P21860 1342 aa23.23■■□□□ 1.31
RAPGEF3-212ENST00000490387 SRCAPQ6ZRS2 3230 aa23.23■■□□□ 1.31
RAPGEF3-212ENST00000490387 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
RAPGEF3-212ENST00000490387 CAMKK2Q96RR4 588 aa23.22■■□□□ 1.31
RAPGEF3-212ENST00000490387 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
RAPGEF3-212ENST00000490387 FBLN1P23142 703 aa23.21■■□□□ 1.31
RAPGEF3-212ENST00000490387 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
RAPGEF3-212ENST00000490387 RREB1Q92766 1687 aa23.2■■□□□ 1.3
RAPGEF3-212ENST00000490387 NLRP2Q9NX02 1062 aa23.2■■□□□ 1.3
RAPGEF3-212ENST00000490387 SMG6Q86US8 1419 aaKnown RBP23.19■■□□□ 1.3
RAPGEF3-212ENST00000490387 ANKRD24Q8TF21 1146 aa23.19■■□□□ 1.3
RAPGEF3-212ENST00000490387 MAP3K19Q56UN5 1328 aa23.18■■□□□ 1.3
RAPGEF3-212ENST00000490387 NUP188Q5SRE5 1749 aa23.17■■□□□ 1.3
RAPGEF3-212ENST00000490387 FAM208AQ9UK61 1670 aaKnown RBP23.17■■□□□ 1.3
RAPGEF3-212ENST00000490387 EXOC5O00471 708 aa23.17■■□□□ 1.3
RAPGEF3-212ENST00000490387 MARCH10Q8NA82 808 aaPredicted RBP23.17■■□□□ 1.3
RAPGEF3-212ENST00000490387 TNS2Q63HR2 1409 aa23.16■■□□□ 1.3
RAPGEF3-212ENST00000490387 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
RAPGEF3-212ENST00000490387 TNNT2P45379 298 aaPredicted RBP23.16■■□□□ 1.3
RAPGEF3-212ENST00000490387 RRS1Q15050 365 aaKnown RBP23.16■■□□□ 1.3
RAPGEF3-212ENST00000490387 IP6K1Q92551 441 aa23.16■■□□□ 1.3
RAPGEF3-212ENST00000490387 RTL1A6NKG5 1358 aa23.15■■□□□ 1.3
RAPGEF3-212ENST00000490387 R3HDM1Q15032 1099 aaKnown RBP23.15■■□□□ 1.3
RAPGEF3-212ENST00000490387 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
RAPGEF3-212ENST00000490387 LRP5O75197 1615 aa23.15■■□□□ 1.3
RAPGEF3-212ENST00000490387 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.29
RAPGEF3-212ENST00000490387 BCL9O00512 1426 aa23.14■■□□□ 1.29
RAPGEF3-212ENST00000490387 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.29
RAPGEF3-212ENST00000490387 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.29
RAPGEF3-212ENST00000490387 IL2RBP14784 551 aa23.13■■□□□ 1.29
RAPGEF3-212ENST00000490387 AMPHP49418 695 aa23.13■■□□□ 1.29
RAPGEF3-212ENST00000490387 LTV1Q96GA3 475 aaPredicted RBP23.13■■□□□ 1.29
RAPGEF3-212ENST00000490387 EMILIN1Q9Y6C2 1016 aa23.13■■□□□ 1.29
RAPGEF3-212ENST00000490387 RALBP1Q15311 655 aa23.12■■□□□ 1.29
RAPGEF3-212ENST00000490387 BCL11BQ9C0K0 894 aaPredicted RBP23.12■■□□□ 1.29
RAPGEF3-212ENST00000490387 PRKRIP1Q9H875 184 aaPredicted RBP23.11■■□□□ 1.29
RAPGEF3-212ENST00000490387 FLT4P35916 1363 aa23.11■■□□□ 1.29
RAPGEF3-212ENST00000490387 HOXC9P31274 260 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms