RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 RGS12O14924 1447 aa12.63□□□□□ -0.39
ECM1-205ENST00000490346 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
ECM1-205ENST00000490346 COL5A2P05997 1499 aaPredicted RBP12.63□□□□□ -0.39
ECM1-205ENST00000490346 CDK12Q9NYV4 1490 aaPredicted RBP12.63□□□□□ -0.39
ECM1-205ENST00000490346 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
ECM1-205ENST00000490346 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
ECM1-205ENST00000490346 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
ECM1-205ENST00000490346 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
ECM1-205ENST00000490346 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
ECM1-205ENST00000490346 ANKRD26Q9UPS8 1709 aa12.61□□□□□ -0.39
ECM1-205ENST00000490346 ABCC6O95255 1503 aa12.61□□□□□ -0.39
ECM1-205ENST00000490346 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
ECM1-205ENST00000490346 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
ECM1-205ENST00000490346 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
ECM1-205ENST00000490346 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
ECM1-205ENST00000490346 AMPHP49418 695 aa12.59□□□□□ -0.39
ECM1-205ENST00000490346 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
ECM1-205ENST00000490346 NSD2O96028 1365 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 A0A0G2JS52 829 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 CRB1P82279 1406 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 MYT1Q01538 1121 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 IP6K1Q92551 441 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
ECM1-205ENST00000490346 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
ECM1-205ENST00000490346 HOXC9P31274 260 aa12.57□□□□□ -0.4
ECM1-205ENST00000490346 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
ECM1-205ENST00000490346 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
ECM1-205ENST00000490346 ERBB3P21860 1342 aa12.57□□□□□ -0.4
ECM1-205ENST00000490346 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
ECM1-205ENST00000490346 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
ECM1-205ENST00000490346 SOCS7O14512 581 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
ECM1-205ENST00000490346 MORC1Q86VD1 984 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
ECM1-205ENST00000490346 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
ECM1-205ENST00000490346 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
ECM1-205ENST00000490346 THSD7AQ9UPZ6 1657 aa12.55□□□□□ -0.4
ECM1-205ENST00000490346 PPM1GO15355 546 aaPredicted RBP12.55□□□□□ -0.4
ECM1-205ENST00000490346 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
ECM1-205ENST00000490346 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
ECM1-205ENST00000490346 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
ECM1-205ENST00000490346 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
ECM1-205ENST00000490346 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
ECM1-205ENST00000490346 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
ECM1-205ENST00000490346 FLT4P35916 1363 aa12.54□□□□□ -0.4
ECM1-205ENST00000490346 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
ECM1-205ENST00000490346 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
ECM1-205ENST00000490346 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
ECM1-205ENST00000490346 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
ECM1-205ENST00000490346 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.4
ECM1-205ENST00000490346 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.41
ECM1-205ENST00000490346 INSRP06213 1382 aa12.52□□□□□ -0.41
ECM1-205ENST00000490346 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
ECM1-205ENST00000490346 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
ECM1-205ENST00000490346 NPC1L1Q9UHC9 1359 aa12.51□□□□□ -0.41
ECM1-205ENST00000490346 SMG6Q86US8 1419 aaKnown RBP12.51□□□□□ -0.41
ECM1-205ENST00000490346 PARP4Q9UKK3 1724 aaKnown RBP12.5□□□□□ -0.41
ECM1-205ENST00000490346 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
ECM1-205ENST00000490346 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
ECM1-205ENST00000490346 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
ECM1-205ENST00000490346 FAM182BQ5T319 152 aa12.49□□□□□ -0.41
ECM1-205ENST00000490346 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
ECM1-205ENST00000490346 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
ECM1-205ENST00000490346 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
ECM1-205ENST00000490346 EP400Q96L91 3159 aa12.48□□□□□ -0.41
ECM1-205ENST00000490346 IL2RBP14784 551 aa12.47□□□□□ -0.41
ECM1-205ENST00000490346 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
ECM1-205ENST00000490346 UPF1Q92900 1129 aaKnown RBP eCLIP12.47□□□□□ -0.41
ECM1-205ENST00000490346 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
ECM1-205ENST00000490346 MTHFSP49914 203 aa12.46□□□□□ -0.41
ECM1-205ENST00000490346 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
ECM1-205ENST00000490346 DDB1Q16531 1140 aa12.46□□□□□ -0.41
ECM1-205ENST00000490346 MEGF6O75095 1541 aa12.44□□□□□ -0.42
ECM1-205ENST00000490346 EXOC5O00471 708 aa12.44□□□□□ -0.42
ECM1-205ENST00000490346 EYA1Q99502 592 aa12.44□□□□□ -0.42
ECM1-205ENST00000490346 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
ECM1-205ENST00000490346 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
ECM1-205ENST00000490346 FAM196AQ6ZSG2 479 aa12.42□□□□□ -0.42
ECM1-205ENST00000490346 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
ECM1-205ENST00000490346 RAPGEF4Q8WZA2 1011 aa12.42□□□□□ -0.42
ECM1-205ENST00000490346 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
ECM1-205ENST00000490346 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
ECM1-205ENST00000490346 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
ECM1-205ENST00000490346 IGSF1Q8N6C5 1336 aa12.4□□□□□ -0.42
ECM1-205ENST00000490346 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
ECM1-205ENST00000490346 IL13P35225 146 aa12.4□□□□□ -0.42
ECM1-205ENST00000490346 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
ECM1-205ENST00000490346 PARD3Q8TEW0 1356 aa12.4□□□□□ -0.42
ECM1-205ENST00000490346 COL3A1P02461 1466 aaPredicted RBP12.4□□□□□ -0.43
ECM1-205ENST00000490346 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.43
ECM1-205ENST00000490346 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.43
ECM1-205ENST00000490346 DIAPH1O60610 1272 aaKnown RBP12.39□□□□□ -0.43
ECM1-205ENST00000490346 TRIM37O94972 964 aa12.39□□□□□ -0.43
ECM1-205ENST00000490346 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms