RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 TRIM46Q7Z4K8 759 aa11.2□□□□□ -0.62
LRRC1-204ENST00000490222 ITPKCQ96DU7 683 aa11.2□□□□□ -0.62
LRRC1-204ENST00000490222 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
LRRC1-204ENST00000490222 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
LRRC1-204ENST00000490222 FBXO45P0C2W1 286 aa11.19□□□□□ -0.62
LRRC1-204ENST00000490222 CCDC116Q8IYX3 515 aa11.19□□□□□ -0.62
LRRC1-204ENST00000490222 TRIM47Q96LD4 638 aa11.19□□□□□ -0.62
LRRC1-204ENST00000490222 ZFAND3Q9H8U3 227 aa11.19□□□□□ -0.62
LRRC1-204ENST00000490222 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
LRRC1-204ENST00000490222 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
LRRC1-204ENST00000490222 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
LRRC1-204ENST00000490222 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
LRRC1-204ENST00000490222 NR1H3Q13133 447 aa11.15□□□□□ -0.62
LRRC1-204ENST00000490222 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
LRRC1-204ENST00000490222 PPP1R26Q5T8A7 1209 aaPredicted RBP11.15□□□□□ -0.62
LRRC1-204ENST00000490222 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
LRRC1-204ENST00000490222 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
LRRC1-204ENST00000490222 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
LRRC1-204ENST00000490222 ESPNB1AK53 854 aa11.13□□□□□ -0.63
LRRC1-204ENST00000490222 MEIOBQ8N635 442 aa11.13□□□□□ -0.63
LRRC1-204ENST00000490222 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
LRRC1-204ENST00000490222 TBC1D2BQ9UPU7 963 aa11.13□□□□□ -0.63
LRRC1-204ENST00000490222 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
LRRC1-204ENST00000490222 MCM6Q14566 821 aa11.12□□□□□ -0.63
LRRC1-204ENST00000490222 PRM3Q9NNZ6 103 aa11.12□□□□□ -0.63
LRRC1-204ENST00000490222 SCARF1Q14162 830 aa11.11□□□□□ -0.63
LRRC1-204ENST00000490222 TMEM132AQ24JP5 1023 aa11.11□□□□□ -0.63
LRRC1-204ENST00000490222 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
LRRC1-204ENST00000490222 ZFP42Q96MM3 310 aa11.11□□□□□ -0.63
LRRC1-204ENST00000490222 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
LRRC1-204ENST00000490222 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
LRRC1-204ENST00000490222 PURBQ96QR8 312 aaKnown RBP11.09□□□□□ -0.63
LRRC1-204ENST00000490222 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
LRRC1-204ENST00000490222 RAB15P59190 212 aa11.08□□□□□ -0.64
LRRC1-204ENST00000490222 Q6ZVU0 165 aa11.08□□□□□ -0.64
LRRC1-204ENST00000490222 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
LRRC1-204ENST00000490222 IRF5Q13568 498 aa11.07□□□□□ -0.64
LRRC1-204ENST00000490222 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
LRRC1-204ENST00000490222 ERVH48-1M5A8F1 160 aa11.06□□□□□ -0.64
LRRC1-204ENST00000490222 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
LRRC1-204ENST00000490222 UPP2O95045 317 aa11.06□□□□□ -0.64
LRRC1-204ENST00000490222 CBLBQ13191 982 aa11.06□□□□□ -0.64
LRRC1-204ENST00000490222 TSEN34Q9BSV6 310 aaKnown RBP11.06□□□□□ -0.64
LRRC1-204ENST00000490222 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
LRRC1-204ENST00000490222 C6orf118Q5T5N4 469 aa11.05□□□□□ -0.64
LRRC1-204ENST00000490222 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
LRRC1-204ENST00000490222 CCDC125Q86Z20 511 aa11.04□□□□□ -0.64
LRRC1-204ENST00000490222 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
LRRC1-204ENST00000490222 BMP2P12643 396 aa11.03□□□□□ -0.64
LRRC1-204ENST00000490222 LILRA1O75019 489 aa11.02□□□□□ -0.65
LRRC1-204ENST00000490222 ABL2P42684 1182 aa11.02□□□□□ -0.65
LRRC1-204ENST00000490222 RNF20Q5VTR2 975 aa11.01□□□□□ -0.65
LRRC1-204ENST00000490222 FLIIQ13045 1269 aa11□□□□□ -0.65
LRRC1-204ENST00000490222 TRIM52Q96A61 297 aa11□□□□□ -0.65
LRRC1-204ENST00000490222 COG6Q9Y2V7 657 aa11□□□□□ -0.65
LRRC1-204ENST00000490222 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
LRRC1-204ENST00000490222 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
LRRC1-204ENST00000490222 SPINT1O43278 529 aa10.98□□□□□ -0.65
LRRC1-204ENST00000490222 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
LRRC1-204ENST00000490222 WASHC4Q2M389 1173 aa10.98□□□□□ -0.65
LRRC1-204ENST00000490222 CYLDQ9NQC7 956 aa10.98□□□□□ -0.65
LRRC1-204ENST00000490222 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
LRRC1-204ENST00000490222 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
LRRC1-204ENST00000490222 ADH1AP07327 375 aa10.97□□□□□ -0.65
LRRC1-204ENST00000490222 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
LRRC1-204ENST00000490222 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
LRRC1-204ENST00000490222 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
LRRC1-204ENST00000490222 MAN1A2O60476 641 aa10.96□□□□□ -0.65
LRRC1-204ENST00000490222 RELBQ01201 579 aa10.96□□□□□ -0.65
LRRC1-204ENST00000490222 TERTO14746 1132 aaKnown RBP10.95□□□□□ -0.66
LRRC1-204ENST00000490222 ERVK-9P63128 1117 aa10.95□□□□□ -0.66
LRRC1-204ENST00000490222 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
LRRC1-204ENST00000490222 LCE2AQ5TA79 106 aaPredicted RBP10.95□□□□□ -0.66
LRRC1-204ENST00000490222 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
LRRC1-204ENST00000490222 POM121Q96HA1 1249 aa10.95□□□□□ -0.66
LRRC1-204ENST00000490222 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
LRRC1-204ENST00000490222 NXF1Q9UBU9 619 aaKnown RBP10.94□□□□□ -0.66
LRRC1-204ENST00000490222 DNMT3LQ9UJW3 386 aa10.94□□□□□ -0.66
LRRC1-204ENST00000490222 PCDHB11Q9Y5F2 797 aa10.94□□□□□ -0.66
LRRC1-204ENST00000490222 PTGIRP43119 386 aa10.93□□□□□ -0.66
LRRC1-204ENST00000490222 WFS1O76024 890 aa10.92□□□□□ -0.66
LRRC1-204ENST00000490222 CC2D2BQ6DHV5 1058 aa10.92□□□□□ -0.66
LRRC1-204ENST00000490222 NPAS3Q8IXF0 933 aa10.92□□□□□ -0.66
LRRC1-204ENST00000490222 CCDC85AQ96PX6 553 aaPredicted RBP10.92□□□□□ -0.66
LRRC1-204ENST00000490222 INSM2Q96T92 566 aaPredicted RBP10.92□□□□□ -0.66
LRRC1-204ENST00000490222 ZNF395Q9H8N7 513 aaPredicted RBP10.92□□□□□ -0.66
LRRC1-204ENST00000490222 RAD21O60216 631 aa10.91□□□□□ -0.66
LRRC1-204ENST00000490222 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
LRRC1-204ENST00000490222 CTSOP43234 321 aaPredicted RBP10.91□□□□□ -0.66
LRRC1-204ENST00000490222 SCTRP47872 440 aa10.91□□□□□ -0.66
LRRC1-204ENST00000490222 SOX11P35716 441 aa10.9□□□□□ -0.66
LRRC1-204ENST00000490222 PHTF2Q8N3S3 785 aa10.9□□□□□ -0.66
LRRC1-204ENST00000490222 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
LRRC1-204ENST00000490222 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.89□□□□□ -0.67
LRRC1-204ENST00000490222 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
LRRC1-204ENST00000490222 SLFNL1Q499Z3 407 aa10.88□□□□□ -0.67
LRRC1-204ENST00000490222 POLMQ9NP87 494 aaPredicted RBP10.88□□□□□ -0.67
LRRC1-204ENST00000490222 FIGNL2A6NMB9 653 aa10.87□□□□□ -0.67
LRRC1-204ENST00000490222 H3BM21 787 aa10.87□□□□□ -0.67
LRRC1-204ENST00000490222 TRAK2O60296 914 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms