RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 AEBP2Q6ZN18 517 aaPredicted RBP30.74■■■□□ 2.51
LRRC1-204ENST00000490222 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
LRRC1-204ENST00000490222 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
LRRC1-204ENST00000490222 PHF23Q9BUL5 403 aaPredicted RBP26.13■■□□□ 1.77
LRRC1-204ENST00000490222 FOXD1Q16676 465 aa24.28■■□□□ 1.48
LRRC1-204ENST00000490222 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
LRRC1-204ENST00000490222 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
LRRC1-204ENST00000490222 ADRA2BP18089 450 aa23.1■■□□□ 1.29
LRRC1-204ENST00000490222 PIAS4Q8N2W9 510 aaPredicted RBP22.82■■□□□ 1.24
LRRC1-204ENST00000490222 MSH5O43196 834 aa22.51■■□□□ 1.19
LRRC1-204ENST00000490222 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
LRRC1-204ENST00000490222 PPP4R3CPQ6ZMV5 832 aa21.14■□□□□ 0.97
LRRC1-204ENST00000490222 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
LRRC1-204ENST00000490222 POTEDQ86YR6 584 aa20.96■□□□□ 0.95
LRRC1-204ENST00000490222 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
LRRC1-204ENST00000490222 CNKSR2Q8WXI2 1034 aa20.61■□□□□ 0.89
LRRC1-204ENST00000490222 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
LRRC1-204ENST00000490222 KCNA4P22459 653 aa20.33■□□□□ 0.85
LRRC1-204ENST00000490222 HOXD11P31277 338 aaPredicted RBP20.29■□□□□ 0.84
LRRC1-204ENST00000490222 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
LRRC1-204ENST00000490222 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
LRRC1-204ENST00000490222 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
LRRC1-204ENST00000490222 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
LRRC1-204ENST00000490222 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
LRRC1-204ENST00000490222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
LRRC1-204ENST00000490222 RNF39Q9H2S5 420 aa19.27■□□□□ 0.68
LRRC1-204ENST00000490222 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
LRRC1-204ENST00000490222 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
LRRC1-204ENST00000490222 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
LRRC1-204ENST00000490222 CACNB1Q02641 598 aaPredicted RBP18.93■□□□□ 0.62
LRRC1-204ENST00000490222 FOXD4L1Q9NU39 408 aa18.8■□□□□ 0.6
LRRC1-204ENST00000490222 ZBTB22O15209 634 aa18.72■□□□□ 0.59
LRRC1-204ENST00000490222 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
LRRC1-204ENST00000490222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
LRRC1-204ENST00000490222 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
LRRC1-204ENST00000490222 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
LRRC1-204ENST00000490222 APLP2Q06481 763 aa18.52■□□□□ 0.56
LRRC1-204ENST00000490222 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
LRRC1-204ENST00000490222 CAPN15O75808 1086 aa18.44■□□□□ 0.54
LRRC1-204ENST00000490222 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
LRRC1-204ENST00000490222 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
LRRC1-204ENST00000490222 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
LRRC1-204ENST00000490222 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
LRRC1-204ENST00000490222 DSG3P32926 999 aa18.22■□□□□ 0.51
LRRC1-204ENST00000490222 ATXN8OSP0DMR3 200 aa18.19■□□□□ 0.5
LRRC1-204ENST00000490222 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
LRRC1-204ENST00000490222 ABCB7O75027 752 aa18.07■□□□□ 0.48
LRRC1-204ENST00000490222 POLA2Q14181 598 aa17.94■□□□□ 0.46
LRRC1-204ENST00000490222 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
LRRC1-204ENST00000490222 FBLN2P98095 1184 aa17.45■□□□□ 0.38
LRRC1-204ENST00000490222 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
LRRC1-204ENST00000490222 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
LRRC1-204ENST00000490222 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
LRRC1-204ENST00000490222 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
LRRC1-204ENST00000490222 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
LRRC1-204ENST00000490222 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
LRRC1-204ENST00000490222 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
LRRC1-204ENST00000490222 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
LRRC1-204ENST00000490222 SSUH2Q9Y2M2 353 aa17■□□□□ 0.31
LRRC1-204ENST00000490222 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
LRRC1-204ENST00000490222 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
LRRC1-204ENST00000490222 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
LRRC1-204ENST00000490222 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
LRRC1-204ENST00000490222 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
LRRC1-204ENST00000490222 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
LRRC1-204ENST00000490222 FKBP8Q14318 412 aa16.61■□□□□ 0.25
LRRC1-204ENST00000490222 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
LRRC1-204ENST00000490222 PROM2Q8N271 834 aa16.59■□□□□ 0.25
LRRC1-204ENST00000490222 POTEHQ6S545 545 aa16.54■□□□□ 0.24
LRRC1-204ENST00000490222 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
LRRC1-204ENST00000490222 PIP4P2Q8N4L2 257 aa16.49■□□□□ 0.23
LRRC1-204ENST00000490222 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
LRRC1-204ENST00000490222 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
LRRC1-204ENST00000490222 PRKAR2AP13861 404 aaKnown RBP16.31■□□□□ 0.2
LRRC1-204ENST00000490222 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
LRRC1-204ENST00000490222 CREBZFQ9NS37 354 aa16.18■□□□□ 0.18
LRRC1-204ENST00000490222 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
LRRC1-204ENST00000490222 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
LRRC1-204ENST00000490222 HAX1O00165 279 aa16.02■□□□□ 0.16
LRRC1-204ENST00000490222 MIER1Q8N108 512 aa16.01■□□□□ 0.15
LRRC1-204ENST00000490222 MNX1P50219 401 aaPredicted RBP15.98■□□□□ 0.15
LRRC1-204ENST00000490222 PLCD3Q8N3E9 789 aa15.96■□□□□ 0.15
LRRC1-204ENST00000490222 C19orf67A6NJJ6 358 aa15.95■□□□□ 0.14
LRRC1-204ENST00000490222 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
LRRC1-204ENST00000490222 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
LRRC1-204ENST00000490222 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
LRRC1-204ENST00000490222 EVX2Q03828 476 aa15.87■□□□□ 0.13
LRRC1-204ENST00000490222 CD44P16070 742 aaKnown RBP15.83■□□□□ 0.12
LRRC1-204ENST00000490222 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
LRRC1-204ENST00000490222 SP7Q8TDD2 431 aaPredicted RBP15.79■□□□□ 0.12
LRRC1-204ENST00000490222 PAK3O75914 559 aaPredicted RBP15.69■□□□□ 0.1
LRRC1-204ENST00000490222 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
LRRC1-204ENST00000490222 NUBP1P53384 320 aa15.66■□□□□ 0.1
LRRC1-204ENST00000490222 IFNLR1Q8IU57 520 aaPredicted RBP15.66■□□□□ 0.1
LRRC1-204ENST00000490222 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
LRRC1-204ENST00000490222 RASEFQ8IZ41 740 aa15.65■□□□□ 0.1
LRRC1-204ENST00000490222 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
LRRC1-204ENST00000490222 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
LRRC1-204ENST00000490222 GABBR2O75899 941 aa15.55■□□□□ 0.08
LRRC1-204ENST00000490222 CLCN6P51797 869 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms