RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 LARP1Q6PKG0 1096 aaKnown RBP31.47■■■□□ 2.63
LSM10-203ENST00000489912 NSD3Q9BZ95 1437 aa31.47■■■□□ 2.63
LSM10-203ENST00000489912 SEPT12Q8IYM1 358 aa31.46■■■□□ 2.63
LSM10-203ENST00000489912 CARD14Q9BXL6 1004 aa31.46■■■□□ 2.63
LSM10-203ENST00000489912 GGNBP2Q9H3C7 697 aa31.46■■■□□ 2.63
LSM10-203ENST00000489912 COL5A2P05997 1499 aaPredicted RBP31.46■■■□□ 2.63
LSM10-203ENST00000489912 AXIN2Q9Y2T1 843 aa31.44■■■□□ 2.62
LSM10-203ENST00000489912 SPATA31A1Q5TZJ5 1347 aa31.44■■■□□ 2.62
LSM10-203ENST00000489912 FYB1O15117 783 aa31.42■■■□□ 2.62
LSM10-203ENST00000489912 ONECUT3O60422 494 aaPredicted RBP31.38■■■□□ 2.61
LSM10-203ENST00000489912 CSB-PGBD3P0DP91 1061 aa31.38■■■□□ 2.61
LSM10-203ENST00000489912 FBLN1P23142 703 aa31.38■■■□□ 2.61
LSM10-203ENST00000489912 TOM1L2Q6ZVM7 507 aa31.37■■■□□ 2.61
LSM10-203ENST00000489912 PANK3Q9H999 370 aa31.37■■■□□ 2.61
LSM10-203ENST00000489912 KIF7Q2M1P5 1343 aa31.37■■■□□ 2.61
LSM10-203ENST00000489912 UPF1Q92900 1129 aaKnown RBP eCLIP31.36■■■□□ 2.61
LSM10-203ENST00000489912 CRB1P82279 1406 aa31.35■■■□□ 2.61
LSM10-203ENST00000489912 TCP11L2Q8N4U5 519 aa31.34■■■□□ 2.61
LSM10-203ENST00000489912 THSD7AQ9UPZ6 1657 aa31.34■■■□□ 2.61
LSM10-203ENST00000489912 ABCC6O95255 1503 aa31.34■■■□□ 2.61
LSM10-203ENST00000489912 CGNL1Q0VF96 1302 aa31.32■■■□□ 2.6
LSM10-203ENST00000489912 WDR17Q8IZU2 1322 aa31.32■■■□□ 2.6
LSM10-203ENST00000489912 KRT27Q7Z3Y8 459 aa31.32■■■□□ 2.6
LSM10-203ENST00000489912 RRS1Q15050 365 aaKnown RBP31.3■■■□□ 2.6
LSM10-203ENST00000489912 MAP3K19Q56UN5 1328 aa31.29■■■□□ 2.6
LSM10-203ENST00000489912 AMPHP49418 695 aa31.29■■■□□ 2.6
LSM10-203ENST00000489912 BARGINQ6ZT62 677 aa31.28■■■□□ 2.6
LSM10-203ENST00000489912 LTV1Q96GA3 475 aaPredicted RBP31.27■■■□□ 2.6
LSM10-203ENST00000489912 ANKRD24Q8TF21 1146 aa31.26■■■□□ 2.59
LSM10-203ENST00000489912 THRAP3Q9Y2W1 955 aaKnown RBP31.26■■■□□ 2.59
LSM10-203ENST00000489912 EP400Q96L91 3159 aa31.25■■■□□ 2.59
LSM10-203ENST00000489912 ANKRD26Q9UPS8 1709 aa31.25■■■□□ 2.59
LSM10-203ENST00000489912 FAM182BQ5T319 152 aa31.25■■■□□ 2.59
LSM10-203ENST00000489912 IP6K1Q92551 441 aa31.25■■■□□ 2.59
LSM10-203ENST00000489912 WNK3Q9BYP7 1800 aa31.25■■■□□ 2.59
LSM10-203ENST00000489912 NLRP2Q9NX02 1062 aa31.24■■■□□ 2.59
LSM10-203ENST00000489912 ERBB3P21860 1342 aa31.24■■■□□ 2.59
LSM10-203ENST00000489912 CCDC7Q96M83 1385 aa31.23■■■□□ 2.59
LSM10-203ENST00000489912 BLMP54132 1417 aaPredicted RBP31.23■■■□□ 2.59
LSM10-203ENST00000489912 HOXC9P31274 260 aa31.22■■■□□ 2.59
LSM10-203ENST00000489912 CARD10Q9BWT7 1032 aa31.22■■■□□ 2.59
LSM10-203ENST00000489912 WASHC2AQ641Q2 1341 aa31.21■■■□□ 2.59
LSM10-203ENST00000489912 PARP4Q9UKK3 1724 aaKnown RBP31.21■■■□□ 2.59
LSM10-203ENST00000489912 MAP2P11137 1827 aaKnown RBP31.2■■■□□ 2.59
LSM10-203ENST00000489912 TNNT2P45379 298 aaPredicted RBP31.2■■■□□ 2.59
LSM10-203ENST00000489912 KNSTRNQ9Y448 316 aa31.2■■■□□ 2.59
LSM10-203ENST00000489912 PDE3BQ13370 1112 aa31.19■■■□□ 2.58
LSM10-203ENST00000489912 PEAK1Q9H792 1746 aa31.18■■■□□ 2.58
LSM10-203ENST00000489912 RGPD2P0DJD1 1756 aa31.17■■■□□ 2.58
LSM10-203ENST00000489912 RTL1A6NKG5 1358 aa31.17■■■□□ 2.58
LSM10-203ENST00000489912 PPM1GO15355 546 aaPredicted RBP31.16■■■□□ 2.58
LSM10-203ENST00000489912 EMILIN1Q9Y6C2 1016 aa31.16■■■□□ 2.58
LSM10-203ENST00000489912 LRRC37A3O60309 1634 aa31.16■■■□□ 2.58
LSM10-203ENST00000489912 FAM208AQ9UK61 1670 aaKnown RBP31.16■■■□□ 2.58
LSM10-203ENST00000489912 DDB1Q16531 1140 aa31.12■■■□□ 2.57
LSM10-203ENST00000489912 NSD2O96028 1365 aa31.11■■■□□ 2.57
LSM10-203ENST00000489912 FLT4P35916 1363 aa31.11■■■□□ 2.57
LSM10-203ENST00000489912 HSP90AB2PQ58FF8 381 aa31.11■■■□□ 2.57
LSM10-203ENST00000489912 MORC1Q86VD1 984 aa31.1■■■□□ 2.57
LSM10-203ENST00000489912 CDCA7Q9BWT1 371 aaPredicted RBP31.1■■■□□ 2.57
LSM10-203ENST00000489912 DISP2A7MBM2 1401 aa31.09■■■□□ 2.57
LSM10-203ENST00000489912 SMG6Q86US8 1419 aaKnown RBP31.08■■■□□ 2.57
LSM10-203ENST00000489912 SF3B2Q13435 895 aaKnown RBP31.08■■■□□ 2.57
LSM10-203ENST00000489912 CNGB1Q14028 1251 aaPredicted RBP31.08■■■□□ 2.57
LSM10-203ENST00000489912 CCDC125Q86Z20 511 aa31.08■■■□□ 2.57
LSM10-203ENST00000489912 INSRP06213 1382 aa31.06■■■□□ 2.56
LSM10-203ENST00000489912 FAM196AQ6ZSG2 479 aa31.06■■■□□ 2.56
LSM10-203ENST00000489912 KIF24Q5T7B8 1368 aa31.05■■■□□ 2.56
LSM10-203ENST00000489912 RGPD1P0DJD0 1748 aa31.05■■■□□ 2.56
LSM10-203ENST00000489912 IL2RBP14784 551 aa31.05■■■□□ 2.56
LSM10-203ENST00000489912 AMER1Q5JTC6 1135 aaPredicted RBP31.05■■■□□ 2.56
LSM10-203ENST00000489912 POLKQ9UBT6 870 aa31.05■■■□□ 2.56
LSM10-203ENST00000489912 EXOC5O00471 708 aa31.04■■■□□ 2.56
LSM10-203ENST00000489912 USHBP1Q8N6Y0 703 aa31.04■■■□□ 2.56
LSM10-203ENST00000489912 CC2D1BQ5T0F9 858 aaKnown RBP31.03■■■□□ 2.56
LSM10-203ENST00000489912 PER1O15534 1290 aaPredicted RBP31.02■■■□□ 2.56
LSM10-203ENST00000489912 TRIM37O94972 964 aa31.01■■■□□ 2.55
LSM10-203ENST00000489912 NBPF6Q5VWK0 638 aa31.01■■■□□ 2.55
LSM10-203ENST00000489912 DEFB132Q7Z7B7 95 aa31.01■■■□□ 2.55
LSM10-203ENST00000489912 NBPF4Q96M43 638 aa31.01■■■□□ 2.55
LSM10-203ENST00000489912 OVOS2A0A0G2JMS6 1433 aa30.99■■■□□ 2.55
LSM10-203ENST00000489912 TNS2Q63HR2 1409 aa30.99■■■□□ 2.55
LSM10-203ENST00000489912 MARCH10Q8NA82 808 aaPredicted RBP30.99■■■□□ 2.55
LSM10-203ENST00000489912 TNS1Q9HBL0 1735 aaKnown RBP30.98■■■□□ 2.55
LSM10-203ENST00000489912 SBF2Q86WG5 1849 aa30.96■■■□□ 2.55
LSM10-203ENST00000489912 KAT6BQ8WYB5 2073 aa30.95■■■□□ 2.55
LSM10-203ENST00000489912 ZEB1P37275 1124 aaPredicted RBP30.94■■■□□ 2.54
LSM10-203ENST00000489912 BAG6P46379 1132 aa30.93■■■□□ 2.54
LSM10-203ENST00000489912 MEGF6O75095 1541 aa30.93■■■□□ 2.54
LSM10-203ENST00000489912 EIF4A2Q14240 407 aaKnown RBP30.9■■■□□ 2.54
LSM10-203ENST00000489912 DDX54Q8TDD1 881 aaKnown RBP30.9■■■□□ 2.54
LSM10-203ENST00000489912 RAPGEF4Q8WZA2 1011 aa30.9■■■□□ 2.54
LSM10-203ENST00000489912 APBA3O96018 575 aa30.89■■■□□ 2.54
LSM10-203ENST00000489912 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
LSM10-203ENST00000489912 TATP17735 454 aaPredicted RBP30.87■■■□□ 2.53
LSM10-203ENST00000489912 EYA1Q99502 592 aa30.87■■■□□ 2.53
LSM10-203ENST00000489912 SHANK3Q9BYB0 1731 aa30.86■■■□□ 2.53
LSM10-203ENST00000489912 NPC1L1Q9UHC9 1359 aa30.85■■■□□ 2.53
LSM10-203ENST00000489912 ZCRB1Q8TBF4 217 aaKnown RBP30.85■■■□□ 2.53
LSM10-203ENST00000489912 ACSBG1Q96GR2 724 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms