RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 THRAP3Q9Y2W1 955 aaKnown RBP26.53■■□□□ 1.84
EPHB4-207ENST00000489808 OVOS2A0A0J9YW53 1432 aa26.53■■□□□ 1.84
EPHB4-207ENST00000489808 OVOS2Q6IE36 1432 aa26.53■■□□□ 1.84
EPHB4-207ENST00000489808 COL5A2P05997 1499 aaPredicted RBP26.53■■□□□ 1.84
EPHB4-207ENST00000489808 NFAT5O94916 1531 aa26.53■■□□□ 1.84
EPHB4-207ENST00000489808 C11orf95C9JLR9 678 aaPredicted RBP26.51■■□□□ 1.83
EPHB4-207ENST00000489808 TOM1L2Q6ZVM7 507 aa26.5■■□□□ 1.83
EPHB4-207ENST00000489808 GGNBP2Q9H3C7 697 aa26.5■■□□□ 1.83
EPHB4-207ENST00000489808 WDR17Q8IZU2 1322 aa26.49■■□□□ 1.83
EPHB4-207ENST00000489808 CRB1P82279 1406 aa26.48■■□□□ 1.83
EPHB4-207ENST00000489808 CCDC125Q86Z20 511 aa26.48■■□□□ 1.83
EPHB4-207ENST00000489808 CSB-PGBD3P0DP91 1061 aa26.47■■□□□ 1.83
EPHB4-207ENST00000489808 FBLN1P23142 703 aa26.47■■□□□ 1.83
EPHB4-207ENST00000489808 COL18A1P39060 1754 aa26.47■■□□□ 1.83
EPHB4-207ENST00000489808 USP54Q70EL1 1684 aa26.46■■□□□ 1.83
EPHB4-207ENST00000489808 IP6K1Q92551 441 aa26.45■■□□□ 1.82
EPHB4-207ENST00000489808 CARD10Q9BWT7 1032 aa26.45■■□□□ 1.82
EPHB4-207ENST00000489808 NSD3Q9BZ95 1437 aa26.43■■□□□ 1.82
EPHB4-207ENST00000489808 FAM182BQ5T319 152 aa26.42■■□□□ 1.82
EPHB4-207ENST00000489808 PANK3Q9H999 370 aa26.42■■□□□ 1.82
EPHB4-207ENST00000489808 MAP3K19Q56UN5 1328 aa26.41■■□□□ 1.82
EPHB4-207ENST00000489808 PDE3BQ13370 1112 aa26.41■■□□□ 1.82
EPHB4-207ENST00000489808 BRWD3Q6RI45 1802 aa26.4■■□□□ 1.82
EPHB4-207ENST00000489808 AMPHP49418 695 aa26.4■■□□□ 1.82
EPHB4-207ENST00000489808 ANKRD24Q8TF21 1146 aa26.4■■□□□ 1.82
EPHB4-207ENST00000489808 EP400Q96L91 3159 aa26.4■■□□□ 1.82
EPHB4-207ENST00000489808 THSD7AQ9UPZ6 1657 aa26.4■■□□□ 1.82
EPHB4-207ENST00000489808 ERBB3P21860 1342 aa26.39■■□□□ 1.82
EPHB4-207ENST00000489808 ABCC6O95255 1503 aa26.39■■□□□ 1.82
EPHB4-207ENST00000489808 CGNL1Q0VF96 1302 aa26.39■■□□□ 1.81
EPHB4-207ENST00000489808 MYOM1P52179 1685 aa26.38■■□□□ 1.81
EPHB4-207ENST00000489808 RRS1Q15050 365 aaKnown RBP26.38■■□□□ 1.81
EPHB4-207ENST00000489808 HOXC9P31274 260 aa26.37■■□□□ 1.81
EPHB4-207ENST00000489808 CDCA7Q9BWT1 371 aaPredicted RBP26.37■■□□□ 1.81
EPHB4-207ENST00000489808 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
EPHB4-207ENST00000489808 FAM196AQ6ZSG2 479 aa26.36■■□□□ 1.81
EPHB4-207ENST00000489808 BLMP54132 1417 aaPredicted RBP26.36■■□□□ 1.81
EPHB4-207ENST00000489808 KIF7Q2M1P5 1343 aa26.36■■□□□ 1.81
EPHB4-207ENST00000489808 SF3B2Q13435 895 aaKnown RBP26.34■■□□□ 1.81
EPHB4-207ENST00000489808 LTV1Q96GA3 475 aaPredicted RBP26.34■■□□□ 1.81
EPHB4-207ENST00000489808 CCDC7Q96M83 1385 aa26.33■■□□□ 1.81
EPHB4-207ENST00000489808 DDB1Q16531 1140 aa26.33■■□□□ 1.81
EPHB4-207ENST00000489808 RGPD5Q99666 1765 aa26.3■■□□□ 1.8
EPHB4-207ENST00000489808 EXOC5O00471 708 aa26.29■■□□□ 1.8
EPHB4-207ENST00000489808 DEFB132Q7Z7B7 95 aa26.29■■□□□ 1.8
EPHB4-207ENST00000489808 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
EPHB4-207ENST00000489808 DISP2A7MBM2 1401 aa26.28■■□□□ 1.8
EPHB4-207ENST00000489808 HSP90AB2PQ58FF8 381 aa26.27■■□□□ 1.8
EPHB4-207ENST00000489808 LTN1O94822 1766 aa26.27■■□□□ 1.8
EPHB4-207ENST00000489808 TRIM37O94972 964 aa26.26■■□□□ 1.79
EPHB4-207ENST00000489808 IL2RBP14784 551 aa26.26■■□□□ 1.79
EPHB4-207ENST00000489808 KNSTRNQ9Y448 316 aa26.26■■□□□ 1.79
EPHB4-207ENST00000489808 EMILIN1Q9Y6C2 1016 aa26.26■■□□□ 1.79
EPHB4-207ENST00000489808 KIF24Q5T7B8 1368 aa26.25■■□□□ 1.79
EPHB4-207ENST00000489808 MARCH10Q8NA82 808 aaPredicted RBP26.25■■□□□ 1.79
EPHB4-207ENST00000489808 BAG6P46379 1132 aa26.23■■□□□ 1.79
EPHB4-207ENST00000489808 POLKQ9UBT6 870 aa26.23■■□□□ 1.79
EPHB4-207ENST00000489808 INSRP06213 1382 aa26.22■■□□□ 1.79
EPHB4-207ENST00000489808 FLT4P35916 1363 aa26.22■■□□□ 1.79
EPHB4-207ENST00000489808 WASHC2AQ641Q2 1341 aa26.22■■□□□ 1.79
EPHB4-207ENST00000489808 PPM1GO15355 546 aaPredicted RBP26.22■■□□□ 1.79
EPHB4-207ENST00000489808 NBPF6Q5VWK0 638 aa26.22■■□□□ 1.79
EPHB4-207ENST00000489808 NBPF4Q96M43 638 aa26.22■■□□□ 1.79
EPHB4-207ENST00000489808 KIF20BQ96Q89 1820 aa26.22■■□□□ 1.79
EPHB4-207ENST00000489808 PARP4Q9UKK3 1724 aaKnown RBP26.22■■□□□ 1.79
EPHB4-207ENST00000489808 TNNT2P45379 298 aaPredicted RBP26.21■■□□□ 1.79
EPHB4-207ENST00000489808 NSD2O96028 1365 aa26.2■■□□□ 1.78
EPHB4-207ENST00000489808 PER1O15534 1290 aaPredicted RBP26.19■■□□□ 1.78
EPHB4-207ENST00000489808 EN1Q05925 392 aaPredicted RBP26.19■■□□□ 1.78
EPHB4-207ENST00000489808 OVOS2A0A0G2JMS6 1433 aa26.18■■□□□ 1.78
EPHB4-207ENST00000489808 APBA3O96018 575 aa26.18■■□□□ 1.78
EPHB4-207ENST00000489808 AMER1Q5JTC6 1135 aaPredicted RBP26.18■■□□□ 1.78
EPHB4-207ENST00000489808 MORC1Q86VD1 984 aa26.18■■□□□ 1.78
EPHB4-207ENST00000489808 SMG6Q86US8 1419 aaKnown RBP26.15■■□□□ 1.78
EPHB4-207ENST00000489808 LRRC37A3O60309 1634 aa26.14■■□□□ 1.78
EPHB4-207ENST00000489808 USHBP1Q8N6Y0 703 aa26.14■■□□□ 1.78
EPHB4-207ENST00000489808 BCL9O00512 1426 aa26.14■■□□□ 1.77
EPHB4-207ENST00000489808 CAMKK2Q96RR4 588 aa26.13■■□□□ 1.77
EPHB4-207ENST00000489808 TNS2Q63HR2 1409 aa26.13■■□□□ 1.77
EPHB4-207ENST00000489808 EZH2Q15910 746 aaKnown RBP26.12■■□□□ 1.77
EPHB4-207ENST00000489808 BCL11BQ9C0K0 894 aaPredicted RBP26.12■■□□□ 1.77
EPHB4-207ENST00000489808 PEAK1Q9H792 1746 aa26.11■■□□□ 1.77
EPHB4-207ENST00000489808 PTF1AQ7RTS3 328 aa26.1■■□□□ 1.77
EPHB4-207ENST00000489808 ZCRB1Q8TBF4 217 aaKnown RBP26.1■■□□□ 1.77
EPHB4-207ENST00000489808 DDX54Q8TDD1 881 aaKnown RBP26.1■■□□□ 1.77
EPHB4-207ENST00000489808 RAPGEF4Q8WZA2 1011 aa26.09■■□□□ 1.77
EPHB4-207ENST00000489808 EYA1Q99502 592 aa26.08■■□□□ 1.77
EPHB4-207ENST00000489808 WNK3Q9BYP7 1800 aa26.08■■□□□ 1.77
EPHB4-207ENST00000489808 RGPD1P0DJD0 1748 aa26.08■■□□□ 1.76
EPHB4-207ENST00000489808 TATP17735 454 aaPredicted RBP26.07■■□□□ 1.76
EPHB4-207ENST00000489808 EIF4A2Q14240 407 aaKnown RBP26.07■■□□□ 1.76
EPHB4-207ENST00000489808 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
EPHB4-207ENST00000489808 CC2D1BQ5T0F9 858 aaKnown RBP26.06■■□□□ 1.76
EPHB4-207ENST00000489808 PLSCR1O15162 318 aa26.05■■□□□ 1.76
EPHB4-207ENST00000489808 KCNQ2O43526 872 aa26.05■■□□□ 1.76
EPHB4-207ENST00000489808 MEGF6O75095 1541 aa26.04■■□□□ 1.76
EPHB4-207ENST00000489808 ACSBG1Q96GR2 724 aa26.04■■□□□ 1.76
EPHB4-207ENST00000489808 MAP2P11137 1827 aaKnown RBP26.03■■□□□ 1.76
EPHB4-207ENST00000489808 PARD3Q8TEW0 1356 aa26.03■■□□□ 1.76
EPHB4-207ENST00000489808 ANKRD26Q9UPS8 1709 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms