RNA–Protein interactions for RNA: ENST00000489789.3

CNTNAP3B-209, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-209ENST00000489789 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
CNTNAP3B-209ENST00000489789 LARP1Q6PKG0 1096 aaKnown RBP8.5□□□□□ -1.05
CNTNAP3B-209ENST00000489789 TERF2IPQ9NYB0 399 aa8.5□□□□□ -1.05
CNTNAP3B-209ENST00000489789 LTN1O94822 1766 aa8.49□□□□□ -1.05
CNTNAP3B-209ENST00000489789 TOM1L2Q6ZVM7 507 aa8.49□□□□□ -1.05
CNTNAP3B-209ENST00000489789 KRT27Q7Z3Y8 459 aa8.49□□□□□ -1.05
CNTNAP3B-209ENST00000489789 TESK2Q96S53 571 aa8.49□□□□□ -1.05
CNTNAP3B-209ENST00000489789 CAMTA1Q9Y6Y1 1673 aa8.49□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SF3B2Q13435 895 aaKnown RBP8.48□□□□□ -1.05
CNTNAP3B-209ENST00000489789 KCNH5Q8NCM2 988 aa8.48□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SPATA31A5Q5VU36 1347 aa8.48□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SPATA31A7Q8IWB4 1347 aa8.48□□□□□ -1.05
CNTNAP3B-209ENST00000489789 TTC21AQ8NDW8 1320 aa8.48□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
CNTNAP3B-209ENST00000489789 CPSF1Q10570 1443 aaKnown RBP8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 PDE3BQ13370 1112 aa8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 LTV1Q96GA3 475 aaPredicted RBP8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 USP19O94966 1318 aa8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 KAT6BQ8WYB5 2073 aa8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 BRD4O60885 1362 aaPredicted RBP8.47□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SSH2Q76I76 1423 aa8.46□□□□□ -1.05
CNTNAP3B-209ENST00000489789 CD163L1Q9NR16 1453 aa8.46□□□□□ -1.05
CNTNAP3B-209ENST00000489789 SLC24A1O60721 1099 aa8.46□□□□□ -1.06
CNTNAP3B-209ENST00000489789 FBLN1P23142 703 aa8.46□□□□□ -1.06
CNTNAP3B-209ENST00000489789 RBM42Q9BTD8 480 aaKnown RBP8.46□□□□□ -1.06
CNTNAP3B-209ENST00000489789 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
CNTNAP3B-209ENST00000489789 SLIT3O75094 1523 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 EIF4G2P78344 907 aaKnown RBP eCLIP8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 DEFB132Q7Z7B7 95 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 TCP11L2Q8N4U5 519 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 COG3Q96JB2 828 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 GGNBP2Q9H3C7 697 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 LMO7Q8WWI1 1683 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 COL18A1P39060 1754 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
CNTNAP3B-209ENST00000489789 ARHGEF25Q86VW2 580 aa8.44□□□□□ -1.06
CNTNAP3B-209ENST00000489789 NLRP2Q9NX02 1062 aa8.44□□□□□ -1.06
CNTNAP3B-209ENST00000489789 CPDO75976 1380 aa8.44□□□□□ -1.06
CNTNAP3B-209ENST00000489789 COL5A2P05997 1499 aaPredicted RBP8.44□□□□□ -1.06
CNTNAP3B-209ENST00000489789 TRIM37O94972 964 aa8.43□□□□□ -1.06
CNTNAP3B-209ENST00000489789 AMPHP49418 695 aa8.43□□□□□ -1.06
CNTNAP3B-209ENST00000489789 PUS7Q96PZ0 661 aaKnown RBP8.43□□□□□ -1.06
CNTNAP3B-209ENST00000489789 CRB1P82279 1406 aa8.43□□□□□ -1.06
CNTNAP3B-209ENST00000489789 EDC4Q6P2E9 1401 aaKnown RBP8.43□□□□□ -1.06
CNTNAP3B-209ENST00000489789 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
CNTNAP3B-209ENST00000489789 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 EN1Q05925 392 aaPredicted RBP8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 CNGB1Q14028 1251 aaPredicted RBP8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 CCDC125Q86Z20 511 aa8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 AATKQ6ZMQ8 1374 aa8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 THSD7AQ9UPZ6 1657 aa8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 RGPD1P0DJD0 1748 aa8.42□□□□□ -1.06
CNTNAP3B-209ENST00000489789 WNK3Q9BYP7 1800 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 MYOM1P52179 1685 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 BLMP54132 1417 aaPredicted RBP8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 USP31Q70CQ4 1352 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 ANKRD36BQ8N2N9 1353 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 WDR17Q8IZU2 1322 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 TNNT2P45379 298 aaPredicted RBP8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 RRS1Q15050 365 aaKnown RBP8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 DDB1Q16531 1140 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 BARGINQ6ZT62 677 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 ANKRD24Q8TF21 1146 aa8.41□□□□□ -1.06
CNTNAP3B-209ENST00000489789 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 NFAT5O94916 1531 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 NINLQ9Y2I6 1382 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 FYB1O15117 783 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 APBA3O96018 575 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 BAG6P46379 1132 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 FAM196AQ6ZSG2 479 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 THRAP3Q9Y2W1 955 aaKnown RBP8.4□□□□□ -1.06
CNTNAP3B-209ENST00000489789 PARP4Q9UKK3 1724 aaKnown RBP8.4□□□□□ -1.07
CNTNAP3B-209ENST00000489789 USP54Q70EL1 1684 aa8.4□□□□□ -1.07
CNTNAP3B-209ENST00000489789 NSD3Q9BZ95 1437 aa8.39□□□□□ -1.07
CNTNAP3B-209ENST00000489789 EXOC5O00471 708 aa8.39□□□□□ -1.07
CNTNAP3B-209ENST00000489789 OVOS2A0A0J9YW53 1432 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 OVOS2Q6IE36 1432 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 MAP3K19Q56UN5 1328 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 CENPBP07199 599 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 EZH2Q15910 746 aaKnown RBP8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 IP6K1Q92551 441 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 CARD10Q9BWT7 1032 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 PANK3Q9H999 370 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 LRRC37A3O60309 1634 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
CNTNAP3B-209ENST00000489789 TNS1Q9HBL0 1735 aaKnown RBP8.37□□□□□ -1.07
CNTNAP3B-209ENST00000489789 HOXC9P31274 260 aa8.37□□□□□ -1.07
CNTNAP3B-209ENST00000489789 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
CNTNAP3B-209ENST00000489789 ACSBG1Q96GR2 724 aa8.37□□□□□ -1.07
CNTNAP3B-209ENST00000489789 ERBB3P21860 1342 aa8.36□□□□□ -1.07
CNTNAP3B-209ENST00000489789 IL2RBP14784 551 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms