RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.56
CNIH3-209ENST00000489556 STRN4Q9NRL3 753 aa11.58□□□□□ -0.56
CNIH3-209ENST00000489556 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
CNIH3-209ENST00000489556 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
CNIH3-209ENST00000489556 SLIT3O75094 1523 aa11.58□□□□□ -0.56
CNIH3-209ENST00000489556 LTN1O94822 1766 aa11.58□□□□□ -0.56
CNIH3-209ENST00000489556 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
CNIH3-209ENST00000489556 ABCA3Q99758 1704 aa11.57□□□□□ -0.56
CNIH3-209ENST00000489556 MARF1Q9Y4F3 1742 aaKnown RBP11.57□□□□□ -0.56
CNIH3-209ENST00000489556 USP54Q70EL1 1684 aa11.57□□□□□ -0.56
CNIH3-209ENST00000489556 ARHGEF25Q86VW2 580 aa11.57□□□□□ -0.56
CNIH3-209ENST00000489556 BTG4Q9NY30 223 aa11.57□□□□□ -0.56
CNIH3-209ENST00000489556 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
CNIH3-209ENST00000489556 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
CNIH3-209ENST00000489556 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
CNIH3-209ENST00000489556 IP6K1Q92551 441 aa11.56□□□□□ -0.56
CNIH3-209ENST00000489556 CRYBG1Q9Y4K1 1723 aa11.56□□□□□ -0.56
CNIH3-209ENST00000489556 CPDO75976 1380 aa11.55□□□□□ -0.56
CNIH3-209ENST00000489556 PARD3Q8TEW0 1356 aa11.55□□□□□ -0.56
CNIH3-209ENST00000489556 HOXC9P31274 260 aa11.55□□□□□ -0.56
CNIH3-209ENST00000489556 USP21Q9UK80 565 aa11.55□□□□□ -0.56
CNIH3-209ENST00000489556 NFAT5O94916 1531 aa11.55□□□□□ -0.56
CNIH3-209ENST00000489556 FLT4P35916 1363 aa11.54□□□□□ -0.56
CNIH3-209ENST00000489556 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
CNIH3-209ENST00000489556 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
CNIH3-209ENST00000489556 TOM1L2Q6ZVM7 507 aa11.54□□□□□ -0.56
CNIH3-209ENST00000489556 LRP6O75581 1613 aa11.53□□□□□ -0.56
CNIH3-209ENST00000489556 SMG6Q86US8 1419 aaKnown RBP11.53□□□□□ -0.56
CNIH3-209ENST00000489556 U2SURPO15042 1029 aaKnown RBP11.53□□□□□ -0.56
CNIH3-209ENST00000489556 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
CNIH3-209ENST00000489556 ANKRD24Q8TF21 1146 aa11.53□□□□□ -0.56
CNIH3-209ENST00000489556 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
CNIH3-209ENST00000489556 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
CNIH3-209ENST00000489556 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
CNIH3-209ENST00000489556 AFF2P51816 1311 aa11.53□□□□□ -0.56
CNIH3-209ENST00000489556 RGPD5Q99666 1765 aa11.52□□□□□ -0.57
CNIH3-209ENST00000489556 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
CNIH3-209ENST00000489556 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
CNIH3-209ENST00000489556 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
CNIH3-209ENST00000489556 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
CNIH3-209ENST00000489556 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
CNIH3-209ENST00000489556 ZNF772Q68DY9 489 aaPredicted RBP11.51□□□□□ -0.57
CNIH3-209ENST00000489556 UNC5CLQ8IV45 518 aa11.51□□□□□ -0.57
CNIH3-209ENST00000489556 MIER1Q8N108 512 aa11.51□□□□□ -0.57
CNIH3-209ENST00000489556 BLMP54132 1417 aaPredicted RBP11.51□□□□□ -0.57
CNIH3-209ENST00000489556 PLCH1Q4KWH8 1693 aa11.5□□□□□ -0.57
CNIH3-209ENST00000489556 A0A0G2JS52 829 aa11.5□□□□□ -0.57
CNIH3-209ENST00000489556 MYT1Q01538 1121 aa11.5□□□□□ -0.57
CNIH3-209ENST00000489556 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
CNIH3-209ENST00000489556 INSRP06213 1382 aa11.5□□□□□ -0.57
CNIH3-209ENST00000489556 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
CNIH3-209ENST00000489556 PEAK1Q9H792 1746 aa11.49□□□□□ -0.57
CNIH3-209ENST00000489556 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
CNIH3-209ENST00000489556 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
CNIH3-209ENST00000489556 EIF4A2Q14240 407 aaKnown RBP11.49□□□□□ -0.57
CNIH3-209ENST00000489556 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
CNIH3-209ENST00000489556 FNBP4Q8N3X1 1017 aaPredicted RBP11.49□□□□□ -0.57
CNIH3-209ENST00000489556 TRPC5Q9UL62 973 aaPredicted RBP11.49□□□□□ -0.57
CNIH3-209ENST00000489556 CAMTA1Q9Y6Y1 1673 aa11.49□□□□□ -0.57
CNIH3-209ENST00000489556 NEFMP07197 916 aa11.48□□□□□ -0.57
CNIH3-209ENST00000489556 WDR17Q8IZU2 1322 aa11.48□□□□□ -0.57
CNIH3-209ENST00000489556 NWD2Q9ULI1 1742 aa11.48□□□□□ -0.57
CNIH3-209ENST00000489556 COL18A1P39060 1754 aa11.48□□□□□ -0.57
CNIH3-209ENST00000489556 ABCC6O95255 1503 aa11.47□□□□□ -0.57
CNIH3-209ENST00000489556 COL5A2P05997 1499 aaPredicted RBP11.47□□□□□ -0.57
CNIH3-209ENST00000489556 ERBB3P21860 1342 aa11.47□□□□□ -0.57
CNIH3-209ENST00000489556 USHBP1Q8N6Y0 703 aa11.47□□□□□ -0.57
CNIH3-209ENST00000489556 LMO7Q8WWI1 1683 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 SLIT2O94813 1529 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 HMOX1P09601 288 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 IL13P35225 146 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 VPS72Q15906 364 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 NBPF6Q5VWK0 638 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 NBPF4Q96M43 638 aa11.46□□□□□ -0.57
CNIH3-209ENST00000489556 U3KPZ7 1027 aaPredicted RBP11.46□□□□□ -0.57
CNIH3-209ENST00000489556 CRB1P82279 1406 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 SULT6B1Q6IMI4 303 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 FAM9BQ8IZU0 186 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 EYA1Q99502 592 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 CARD10Q9BWT7 1032 aa11.45□□□□□ -0.58
CNIH3-209ENST00000489556 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
CNIH3-209ENST00000489556 BCL9LQ86UU0 1499 aa11.44□□□□□ -0.58
CNIH3-209ENST00000489556 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
CNIH3-209ENST00000489556 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
CNIH3-209ENST00000489556 RXRBP28702 533 aa11.44□□□□□ -0.58
CNIH3-209ENST00000489556 TCP11L2Q8N4U5 519 aa11.44□□□□□ -0.58
CNIH3-209ENST00000489556 GJD4Q96KN9 370 aaPredicted RBP11.44□□□□□ -0.58
CNIH3-209ENST00000489556 NRAPQ86VF7 1730 aa11.43□□□□□ -0.58
CNIH3-209ENST00000489556 FAM208AQ9UK61 1670 aaKnown RBP11.43□□□□□ -0.58
CNIH3-209ENST00000489556 SPATA31A5Q5VU36 1347 aa11.43□□□□□ -0.58
CNIH3-209ENST00000489556 SPATA31A7Q8IWB4 1347 aa11.43□□□□□ -0.58
CNIH3-209ENST00000489556 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
CNIH3-209ENST00000489556 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
CNIH3-209ENST00000489556 IL2RBP14784 551 aa11.42□□□□□ -0.58
CNIH3-209ENST00000489556 RBM6P78332 1123 aaKnown RBP11.42□□□□□ -0.58
CNIH3-209ENST00000489556 THRAP3Q9Y2W1 955 aaKnown RBP11.42□□□□□ -0.58
CNIH3-209ENST00000489556 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms