RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 FLT4P35916 1363 aa19.19■□□□□ 0.66
CLDN11-209ENST00000489485 IP6K1Q92551 441 aa19.18■□□□□ 0.66
CLDN11-209ENST00000489485 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
CLDN11-209ENST00000489485 COL14A1Q05707 1796 aaKnown RBP19.18■□□□□ 0.66
CLDN11-209ENST00000489485 HSP90AB2PQ58FF8 381 aa19.18■□□□□ 0.66
CLDN11-209ENST00000489485 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
CLDN11-209ENST00000489485 RTL1A6NKG5 1358 aa19.17■□□□□ 0.66
CLDN11-209ENST00000489485 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
CLDN11-209ENST00000489485 COL18A1P39060 1754 aa19.17■□□□□ 0.66
CLDN11-209ENST00000489485 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
CLDN11-209ENST00000489485 PLCH1Q4KWH8 1693 aa19.16■□□□□ 0.66
CLDN11-209ENST00000489485 CCDC184Q52MB2 194 aa19.16■□□□□ 0.66
CLDN11-209ENST00000489485 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
CLDN11-209ENST00000489485 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
CLDN11-209ENST00000489485 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
CLDN11-209ENST00000489485 LMO7Q8WWI1 1683 aa19.15■□□□□ 0.66
CLDN11-209ENST00000489485 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
CLDN11-209ENST00000489485 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
CLDN11-209ENST00000489485 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
CLDN11-209ENST00000489485 ABCC6O95255 1503 aa19.13■□□□□ 0.65
CLDN11-209ENST00000489485 INSRP06213 1382 aa19.13■□□□□ 0.65
CLDN11-209ENST00000489485 EVA1CP58658 441 aa19.13■□□□□ 0.65
CLDN11-209ENST00000489485 STRN4Q9NRL3 753 aa19.13■□□□□ 0.65
CLDN11-209ENST00000489485 MRS2Q9HD23 443 aa19.12■□□□□ 0.65
CLDN11-209ENST00000489485 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
CLDN11-209ENST00000489485 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
CLDN11-209ENST00000489485 NWD2Q9ULI1 1742 aa19.11■□□□□ 0.65
CLDN11-209ENST00000489485 SLIT2O94813 1529 aa19.11■□□□□ 0.65
CLDN11-209ENST00000489485 ERBB3P21860 1342 aa19.11■□□□□ 0.65
CLDN11-209ENST00000489485 COL5A2P05997 1499 aaPredicted RBP19.1■□□□□ 0.65
CLDN11-209ENST00000489485 DIAPH1O60610 1272 aaKnown RBP19.1■□□□□ 0.65
CLDN11-209ENST00000489485 FNBP4Q8N3X1 1017 aaPredicted RBP19.1■□□□□ 0.65
CLDN11-209ENST00000489485 USP21Q9UK80 565 aa19.1■□□□□ 0.65
CLDN11-209ENST00000489485 AFF2P51816 1311 aa19.1■□□□□ 0.65
CLDN11-209ENST00000489485 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
CLDN11-209ENST00000489485 UNC5CLQ8IV45 518 aa19.08■□□□□ 0.65
CLDN11-209ENST00000489485 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
CLDN11-209ENST00000489485 BCL9LQ86UU0 1499 aa19.07■□□□□ 0.64
CLDN11-209ENST00000489485 NRAPQ86VF7 1730 aa19.07■□□□□ 0.64
CLDN11-209ENST00000489485 COL3A1P02461 1466 aaPredicted RBP19.07■□□□□ 0.64
CLDN11-209ENST00000489485 WDR17Q8IZU2 1322 aa19.07■□□□□ 0.64
CLDN11-209ENST00000489485 LARP1Q6PKG0 1096 aaKnown RBP19.07■□□□□ 0.64
CLDN11-209ENST00000489485 NLRP2Q9NX02 1062 aa19.07■□□□□ 0.64
CLDN11-209ENST00000489485 RGPD2P0DJD1 1756 aa19.06■□□□□ 0.64
CLDN11-209ENST00000489485 U2SURPO15042 1029 aaKnown RBP19.06■□□□□ 0.64
CLDN11-209ENST00000489485 IL13P35225 146 aa19.06■□□□□ 0.64
CLDN11-209ENST00000489485 CCDC9Q9Y3X0 531 aaKnown RBP19.06■□□□□ 0.64
CLDN11-209ENST00000489485 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
CLDN11-209ENST00000489485 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
CLDN11-209ENST00000489485 FAM208AQ9UK61 1670 aaKnown RBP19.04■□□□□ 0.64
CLDN11-209ENST00000489485 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
CLDN11-209ENST00000489485 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
CLDN11-209ENST00000489485 NBPF6Q5VWK0 638 aa19.03■□□□□ 0.64
CLDN11-209ENST00000489485 NBPF4Q96M43 638 aa19.03■□□□□ 0.64
CLDN11-209ENST00000489485 EYA1Q99502 592 aa19.03■□□□□ 0.64
CLDN11-209ENST00000489485 CRB1P82279 1406 aa19.03■□□□□ 0.64
CLDN11-209ENST00000489485 USHBP1Q8N6Y0 703 aa19.03■□□□□ 0.64
CLDN11-209ENST00000489485 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
CLDN11-209ENST00000489485 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLDN11-209ENST00000489485 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLDN11-209ENST00000489485 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
CLDN11-209ENST00000489485 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
CLDN11-209ENST00000489485 VPS72Q15906 364 aa19.01■□□□□ 0.63
CLDN11-209ENST00000489485 HMOX1P09601 288 aa19■□□□□ 0.63
CLDN11-209ENST00000489485 PNISRQ8TF01 805 aaKnown RBP19■□□□□ 0.63
CLDN11-209ENST00000489485 CARD10Q9BWT7 1032 aa19■□□□□ 0.63
CLDN11-209ENST00000489485 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
CLDN11-209ENST00000489485 TRPC5Q9UL62 973 aaPredicted RBP19■□□□□ 0.63
CLDN11-209ENST00000489485 RGPD1P0DJD0 1748 aa18.99■□□□□ 0.63
CLDN11-209ENST00000489485 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
CLDN11-209ENST00000489485 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
CLDN11-209ENST00000489485 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
CLDN11-209ENST00000489485 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
CLDN11-209ENST00000489485 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
CLDN11-209ENST00000489485 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
CLDN11-209ENST00000489485 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
CLDN11-209ENST00000489485 GJD4Q96KN9 370 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-209ENST00000489485 ATRNO75882 1429 aa18.96■□□□□ 0.63
CLDN11-209ENST00000489485 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
CLDN11-209ENST00000489485 ADAMTS8Q9UP79 889 aa18.96■□□□□ 0.63
CLDN11-209ENST00000489485 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
CLDN11-209ENST00000489485 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
CLDN11-209ENST00000489485 KDRP35968 1356 aa18.94■□□□□ 0.62
CLDN11-209ENST00000489485 FAM98CQ17RN3 349 aaKnown RBP18.93■□□□□ 0.62
CLDN11-209ENST00000489485 FCHSD2O94868 740 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 NCAPD2Q15021 1401 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 GLI3P10071 1580 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 A0A0G2JS52 829 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 IL2RBP14784 551 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 MYT1Q01538 1121 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 RSPH6AQ9H0K4 717 aa18.92■□□□□ 0.62
CLDN11-209ENST00000489485 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
CLDN11-209ENST00000489485 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
CLDN11-209ENST00000489485 MEGF6O75095 1541 aa18.9■□□□□ 0.62
CLDN11-209ENST00000489485 RBM6P78332 1123 aaKnown RBP18.9■□□□□ 0.62
CLDN11-209ENST00000489485 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
CLDN11-209ENST00000489485 BARGINQ6ZT62 677 aa18.9■□□□□ 0.62
CLDN11-209ENST00000489485 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
CLDN11-209ENST00000489485 PNNQ9H307 717 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms