RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
SFXN3-207ENST00000489434 SOX12O15370 315 aa17■□□□□ 0.31
SFXN3-207ENST00000489434 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
SFXN3-207ENST00000489434 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
SFXN3-207ENST00000489434 KTN1Q86UP2 1357 aaKnown RBP17■□□□□ 0.31
SFXN3-207ENST00000489434 PLSCR1O15162 318 aa16.99■□□□□ 0.31
SFXN3-207ENST00000489434 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
SFXN3-207ENST00000489434 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
SFXN3-207ENST00000489434 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
SFXN3-207ENST00000489434 COL18A1P39060 1754 aa16.99■□□□□ 0.31
SFXN3-207ENST00000489434 AKAP12Q02952 1782 aa16.99■□□□□ 0.31
SFXN3-207ENST00000489434 LRRC37A3O60309 1634 aa16.99■□□□□ 0.31
SFXN3-207ENST00000489434 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
SFXN3-207ENST00000489434 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
SFXN3-207ENST00000489434 SBF2Q86WG5 1849 aa16.98■□□□□ 0.31
SFXN3-207ENST00000489434 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
SFXN3-207ENST00000489434 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
SFXN3-207ENST00000489434 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
SFXN3-207ENST00000489434 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
SFXN3-207ENST00000489434 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
SFXN3-207ENST00000489434 EXOC5O00471 708 aa16.95■□□□□ 0.3
SFXN3-207ENST00000489434 KCNQ2O43526 872 aa16.95■□□□□ 0.3
SFXN3-207ENST00000489434 MARCH10Q8NA82 808 aaPredicted RBP16.95■□□□□ 0.3
SFXN3-207ENST00000489434 WNK3Q9BYP7 1800 aa16.95■□□□□ 0.3
SFXN3-207ENST00000489434 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
SFXN3-207ENST00000489434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
SFXN3-207ENST00000489434 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
SFXN3-207ENST00000489434 ABCC6O95255 1503 aa16.94■□□□□ 0.3
SFXN3-207ENST00000489434 BCL9O00512 1426 aa16.94■□□□□ 0.3
SFXN3-207ENST00000489434 NFAT5O94916 1531 aa16.92■□□□□ 0.3
SFXN3-207ENST00000489434 HDGFL2Q7Z4V5 671 aaPredicted RBP16.92■□□□□ 0.3
SFXN3-207ENST00000489434 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
SFXN3-207ENST00000489434 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
SFXN3-207ENST00000489434 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
SFXN3-207ENST00000489434 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
SFXN3-207ENST00000489434 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
SFXN3-207ENST00000489434 USP31Q70CQ4 1352 aa16.89■□□□□ 0.3
SFXN3-207ENST00000489434 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
SFXN3-207ENST00000489434 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
SFXN3-207ENST00000489434 NME9Q86XW9 330 aa16.88■□□□□ 0.29
SFXN3-207ENST00000489434 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
SFXN3-207ENST00000489434 KAT6BQ8WYB5 2073 aa16.87■□□□□ 0.29
SFXN3-207ENST00000489434 YY1P25490 414 aa16.87■□□□□ 0.29
SFXN3-207ENST00000489434 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
SFXN3-207ENST00000489434 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
SFXN3-207ENST00000489434 ERBB3P21860 1342 aa16.87■□□□□ 0.29
SFXN3-207ENST00000489434 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
SFXN3-207ENST00000489434 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
SFXN3-207ENST00000489434 IL2RBP14784 551 aa16.86■□□□□ 0.29
SFXN3-207ENST00000489434 PROM2Q8N271 834 aa16.86■□□□□ 0.29
SFXN3-207ENST00000489434 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
SFXN3-207ENST00000489434 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
SFXN3-207ENST00000489434 LTN1O94822 1766 aa16.85■□□□□ 0.29
SFXN3-207ENST00000489434 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
SFXN3-207ENST00000489434 ZBTB7AO95365 584 aa16.84■□□□□ 0.29
SFXN3-207ENST00000489434 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
SFXN3-207ENST00000489434 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
SFXN3-207ENST00000489434 SLC15A2Q16348 729 aa16.83■□□□□ 0.28
SFXN3-207ENST00000489434 CASZ1Q86V15 1759 aa16.83■□□□□ 0.28
SFXN3-207ENST00000489434 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
SFXN3-207ENST00000489434 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
SFXN3-207ENST00000489434 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
SFXN3-207ENST00000489434 A0A1W2PP64 1363 aa16.8■□□□□ 0.28
SFXN3-207ENST00000489434 PDGFDQ9GZP0 370 aaPredicted RBP16.8■□□□□ 0.28
SFXN3-207ENST00000489434 ATF5Q9Y2D1 282 aaPredicted RBP16.8■□□□□ 0.28
SFXN3-207ENST00000489434 IP6K1Q92551 441 aa16.79■□□□□ 0.28
SFXN3-207ENST00000489434 COG3Q96JB2 828 aa16.79■□□□□ 0.28
SFXN3-207ENST00000489434 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
SFXN3-207ENST00000489434 PTGER2P43116 358 aa16.78■□□□□ 0.28
SFXN3-207ENST00000489434 LTV1Q96GA3 475 aaPredicted RBP16.77■□□□□ 0.28
SFXN3-207ENST00000489434 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
SFXN3-207ENST00000489434 BTAF1O14981 1849 aa16.76■□□□□ 0.27
SFXN3-207ENST00000489434 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
SFXN3-207ENST00000489434 MYOM1P52179 1685 aa16.75■□□□□ 0.27
SFXN3-207ENST00000489434 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
SFXN3-207ENST00000489434 AMPHP49418 695 aa16.75■□□□□ 0.27
SFXN3-207ENST00000489434 TESK2Q96S53 571 aa16.74■□□□□ 0.27
SFXN3-207ENST00000489434 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
SFXN3-207ENST00000489434 SLC27A3Q5K4L6 730 aa16.73■□□□□ 0.27
SFXN3-207ENST00000489434 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
SFXN3-207ENST00000489434 SYT17Q9BSW7 474 aa16.72■□□□□ 0.27
SFXN3-207ENST00000489434 MAP3K19Q56UN5 1328 aa16.71■□□□□ 0.27
SFXN3-207ENST00000489434 HOXC9P31274 260 aa16.71■□□□□ 0.27
SFXN3-207ENST00000489434 ARXQ96QS3 562 aa16.71■□□□□ 0.27
SFXN3-207ENST00000489434 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
SFXN3-207ENST00000489434 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
SFXN3-207ENST00000489434 TMF1P82094 1093 aa16.69■□□□□ 0.26
SFXN3-207ENST00000489434 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
SFXN3-207ENST00000489434 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
SFXN3-207ENST00000489434 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
SFXN3-207ENST00000489434 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
SFXN3-207ENST00000489434 LRRC4BQ9NT99 713 aa16.69■□□□□ 0.26
SFXN3-207ENST00000489434 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
SFXN3-207ENST00000489434 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
SFXN3-207ENST00000489434 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
SFXN3-207ENST00000489434 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
SFXN3-207ENST00000489434 SMG6Q86US8 1419 aaKnown RBP16.68■□□□□ 0.26
SFXN3-207ENST00000489434 POLD1P28340 1107 aa16.67■□□□□ 0.26
SFXN3-207ENST00000489434 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
SFXN3-207ENST00000489434 MAP3K5Q99683 1374 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms