RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 THRAP3Q9Y2W1 955 aaKnown RBP23.77■■□□□ 1.4
CDK11A-218ENST00000489300 ABCC6O95255 1503 aa23.77■■□□□ 1.4
CDK11A-218ENST00000489300 MAP3K19Q56UN5 1328 aa23.77■■□□□ 1.4
CDK11A-218ENST00000489300 SPATA31A5Q5VU36 1347 aa23.77■■□□□ 1.4
CDK11A-218ENST00000489300 SPATA31A7Q8IWB4 1347 aa23.77■■□□□ 1.4
CDK11A-218ENST00000489300 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
CDK11A-218ENST00000489300 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
CDK11A-218ENST00000489300 LARP1Q6PKG0 1096 aaKnown RBP23.75■■□□□ 1.39
CDK11A-218ENST00000489300 WDR17Q8IZU2 1322 aa23.75■■□□□ 1.39
CDK11A-218ENST00000489300 NPC1L1Q9UHC9 1359 aa23.75■■□□□ 1.39
CDK11A-218ENST00000489300 BLMP54132 1417 aaPredicted RBP23.75■■□□□ 1.39
CDK11A-218ENST00000489300 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
CDK11A-218ENST00000489300 HOXC9P31274 260 aa23.74■■□□□ 1.39
CDK11A-218ENST00000489300 TNNT2P45379 298 aaPredicted RBP23.74■■□□□ 1.39
CDK11A-218ENST00000489300 COL5A2P05997 1499 aaPredicted RBP23.74■■□□□ 1.39
CDK11A-218ENST00000489300 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 CAMTA1Q9Y6Y1 1673 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.73■■□□□ 1.39
CDK11A-218ENST00000489300 A0A0G2JS52 829 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 PPM1GO15355 546 aaPredicted RBP23.73■■□□□ 1.39
CDK11A-218ENST00000489300 MYT1Q01538 1121 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 CC2D1BQ5T0F9 858 aaKnown RBP23.73■■□□□ 1.39
CDK11A-218ENST00000489300 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 ANKRD24Q8TF21 1146 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 USP35Q9P2H5 1018 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
CDK11A-218ENST00000489300 KIF20BQ96Q89 1820 aa23.71■■□□□ 1.39
CDK11A-218ENST00000489300 CRB1P82279 1406 aa23.71■■□□□ 1.39
CDK11A-218ENST00000489300 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
CDK11A-218ENST00000489300 FLT4P35916 1363 aa23.71■■□□□ 1.39
CDK11A-218ENST00000489300 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
CDK11A-218ENST00000489300 FBLN1P23142 703 aa23.71■■□□□ 1.39
CDK11A-218ENST00000489300 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
CDK11A-218ENST00000489300 CARD10Q9BWT7 1032 aa23.71■■□□□ 1.39
CDK11A-218ENST00000489300 ERBB3P21860 1342 aa23.7■■□□□ 1.38
CDK11A-218ENST00000489300 ONECUT3O60422 494 aaPredicted RBP23.7■■□□□ 1.38
CDK11A-218ENST00000489300 FAM98CQ17RN3 349 aaKnown RBP23.7■■□□□ 1.38
CDK11A-218ENST00000489300 BARGINQ6ZT62 677 aa23.7■■□□□ 1.38
CDK11A-218ENST00000489300 CDCA7Q9BWT1 371 aaPredicted RBP23.7■■□□□ 1.38
CDK11A-218ENST00000489300 DDX10Q13206 875 aaKnown RBP23.69■■□□□ 1.38
CDK11A-218ENST00000489300 NLRP2Q9NX02 1062 aa23.69■■□□□ 1.38
CDK11A-218ENST00000489300 LMO7Q8WWI1 1683 aa23.69■■□□□ 1.38
CDK11A-218ENST00000489300 SEPT12Q8IYM1 358 aa23.68■■□□□ 1.38
CDK11A-218ENST00000489300 LTV1Q96GA3 475 aaPredicted RBP23.68■■□□□ 1.38
CDK11A-218ENST00000489300 POLKQ9UBT6 870 aa23.68■■□□□ 1.38
CDK11A-218ENST00000489300 EMILIN1Q9Y6C2 1016 aa23.67■■□□□ 1.38
CDK11A-218ENST00000489300 INSRP06213 1382 aa23.66■■□□□ 1.38
CDK11A-218ENST00000489300 CNGB1Q14028 1251 aaPredicted RBP23.65■■□□□ 1.38
CDK11A-218ENST00000489300 NRAPQ86VF7 1730 aa23.64■■□□□ 1.38
CDK11A-218ENST00000489300 HSP90AB2PQ58FF8 381 aa23.64■■□□□ 1.37
CDK11A-218ENST00000489300 RGS12O14924 1447 aa23.62■■□□□ 1.37
CDK11A-218ENST00000489300 COL18A1P39060 1754 aa23.62■■□□□ 1.37
CDK11A-218ENST00000489300 PDE3BQ13370 1112 aa23.61■■□□□ 1.37
CDK11A-218ENST00000489300 KRT27Q7Z3Y8 459 aa23.6■■□□□ 1.37
CDK11A-218ENST00000489300 GLI3P10071 1580 aa23.6■■□□□ 1.37
CDK11A-218ENST00000489300 LTN1O94822 1766 aa23.59■■□□□ 1.37
CDK11A-218ENST00000489300 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
CDK11A-218ENST00000489300 EXOC5O00471 708 aa23.57■■□□□ 1.36
CDK11A-218ENST00000489300 IL2RBP14784 551 aa23.57■■□□□ 1.36
CDK11A-218ENST00000489300 MTHFSP49914 203 aa23.57■■□□□ 1.36
CDK11A-218ENST00000489300 DDB1Q16531 1140 aa23.57■■□□□ 1.36
CDK11A-218ENST00000489300 CFAP53Q96M91 514 aa23.57■■□□□ 1.36
CDK11A-218ENST00000489300 RALBP1Q15311 655 aa23.56■■□□□ 1.36
CDK11A-218ENST00000489300 SOCS7O14512 581 aa23.55■■□□□ 1.36
CDK11A-218ENST00000489300 RAPGEF4Q8WZA2 1011 aa23.54■■□□□ 1.36
CDK11A-218ENST00000489300 NBPF6Q5VWK0 638 aa23.53■■□□□ 1.36
CDK11A-218ENST00000489300 NBPF4Q96M43 638 aa23.53■■□□□ 1.36
CDK11A-218ENST00000489300 EIF4A2Q14240 407 aaKnown RBP23.52■■□□□ 1.36
CDK11A-218ENST00000489300 TATP17735 454 aaPredicted RBP23.51■■□□□ 1.35
CDK11A-218ENST00000489300 DIAPH1O60610 1272 aaKnown RBP23.5■■□□□ 1.35
CDK11A-218ENST00000489300 FAM196AQ6ZSG2 479 aa23.5■■□□□ 1.35
CDK11A-218ENST00000489300 PPP2R1AP30153 589 aa23.49■■□□□ 1.35
CDK11A-218ENST00000489300 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
CDK11A-218ENST00000489300 EYA1Q99502 592 aa23.48■■□□□ 1.35
CDK11A-218ENST00000489300 NUDCQ9Y266 331 aa23.48■■□□□ 1.35
CDK11A-218ENST00000489300 FAM208AQ9UK61 1670 aaKnown RBP23.48■■□□□ 1.35
CDK11A-218ENST00000489300 IL13P35225 146 aa23.46■■□□□ 1.35
CDK11A-218ENST00000489300 SF3B2Q13435 895 aaKnown RBP23.46■■□□□ 1.35
CDK11A-218ENST00000489300 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
CDK11A-218ENST00000489300 PARD3Q8TEW0 1356 aa23.46■■□□□ 1.35
CDK11A-218ENST00000489300 RGPD5Q99666 1765 aa23.46■■□□□ 1.35
CDK11A-218ENST00000489300 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
CDK11A-218ENST00000489300 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
CDK11A-218ENST00000489300 DISP2A7MBM2 1401 aa23.45■■□□□ 1.34
CDK11A-218ENST00000489300 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
CDK11A-218ENST00000489300 THSD7AQ9UPZ6 1657 aa23.44■■□□□ 1.34
CDK11A-218ENST00000489300 SPG7Q9UQ90 795 aa23.43■■□□□ 1.34
CDK11A-218ENST00000489300 IGSF1Q8N6C5 1336 aa23.42■■□□□ 1.34
CDK11A-218ENST00000489300 UPF1Q92900 1129 aaKnown RBP eCLIP23.41■■□□□ 1.34
CDK11A-218ENST00000489300 OVOS2A0A0G2JMS6 1433 aa23.41■■□□□ 1.34
CDK11A-218ENST00000489300 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
CDK11A-218ENST00000489300 SULT6B1Q6IMI4 303 aa23.4■■□□□ 1.34
CDK11A-218ENST00000489300 DDX54Q8TDD1 881 aaKnown RBP23.4■■□□□ 1.34
CDK11A-218ENST00000489300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.4■■□□□ 1.34
CDK11A-218ENST00000489300 TNS2Q63HR2 1409 aa23.4■■□□□ 1.34
CDK11A-218ENST00000489300 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
CDK11A-218ENST00000489300 U2SURPO15042 1029 aaKnown RBP23.39■■□□□ 1.33
CDK11A-218ENST00000489300 ANP32CO43423 234 aa23.38■■□□□ 1.33
CDK11A-218ENST00000489300 AMOTQ4VCS5 1084 aa23.38■■□□□ 1.33
CDK11A-218ENST00000489300 MARCH10Q8NA82 808 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms