RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
CBWD1-216ENST00000489272 IGF1RP08069 1367 aa9.39□□□□□ -0.91
CBWD1-216ENST00000489272 RBM26Q5T8P6 1007 aaKnown RBP9.39□□□□□ -0.91
CBWD1-216ENST00000489272 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
CBWD1-216ENST00000489272 FSHRP23945 695 aa9.37□□□□□ -0.91
CBWD1-216ENST00000489272 ACDQ96AP0 544 aa9.37□□□□□ -0.91
CBWD1-216ENST00000489272 SEMA6BQ9H3T3 888 aa9.37□□□□□ -0.91
CBWD1-216ENST00000489272 COL8A1P27658 744 aa9.36□□□□□ -0.91
CBWD1-216ENST00000489272 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
CBWD1-216ENST00000489272 LCE1DQ5T752 114 aa9.36□□□□□ -0.91
CBWD1-216ENST00000489272 Q6ZVU0 165 aa9.36□□□□□ -0.91
CBWD1-216ENST00000489272 FDX1P10109 184 aa9.35□□□□□ -0.91
CBWD1-216ENST00000489272 SNRPNP63162 240 aaKnown RBP9.35□□□□□ -0.91
CBWD1-216ENST00000489272 DESI1Q6ICB0 168 aa9.35□□□□□ -0.91
CBWD1-216ENST00000489272 CUEDC1Q9NWM3 386 aaPredicted RBP9.35□□□□□ -0.91
CBWD1-216ENST00000489272 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
CBWD1-216ENST00000489272 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-216ENST00000489272 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-216ENST00000489272 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-216ENST00000489272 CCDC116Q8IYX3 515 aa9.33□□□□□ -0.92
CBWD1-216ENST00000489272 MKL2Q9ULH7 1088 aa9.33□□□□□ -0.92
CBWD1-216ENST00000489272 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
CBWD1-216ENST00000489272 CTHP32929 405 aa9.32□□□□□ -0.92
CBWD1-216ENST00000489272 AGERQ15109 404 aa9.32□□□□□ -0.92
CBWD1-216ENST00000489272 BPHLQ86WA6 291 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-216ENST00000489272 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
CBWD1-216ENST00000489272 CBLBQ13191 982 aa9.31□□□□□ -0.92
CBWD1-216ENST00000489272 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
CBWD1-216ENST00000489272 C1QTNF9BB2RNN3 333 aa9.3□□□□□ -0.92
CBWD1-216ENST00000489272 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
CBWD1-216ENST00000489272 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
CBWD1-216ENST00000489272 RNF217Q8TC41 542 aa9.3□□□□□ -0.92
CBWD1-216ENST00000489272 OIP5O43482 229 aa9.29□□□□□ -0.92
CBWD1-216ENST00000489272 C1QTNF2Q9BXJ5 285 aa9.29□□□□□ -0.92
CBWD1-216ENST00000489272 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
CBWD1-216ENST00000489272 ZFP64Q9NPA5 681 aa9.28□□□□□ -0.92
CBWD1-216ENST00000489272 ARTNQ5T4W7 220 aa9.27□□□□□ -0.93
CBWD1-216ENST00000489272 CD163Q86VB7 1156 aa9.27□□□□□ -0.93
CBWD1-216ENST00000489272 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
CBWD1-216ENST00000489272 GMCL1Q96IK5 515 aa9.27□□□□□ -0.93
CBWD1-216ENST00000489272 INSM2Q96T92 566 aaPredicted RBP9.27□□□□□ -0.93
CBWD1-216ENST00000489272 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
CBWD1-216ENST00000489272 MDM2Q00987 491 aaPredicted RBP9.26□□□□□ -0.93
CBWD1-216ENST00000489272 FOXR1Q6PIV2 292 aa9.26□□□□□ -0.93
CBWD1-216ENST00000489272 GPR25O00155 361 aa9.25□□□□□ -0.93
CBWD1-216ENST00000489272 PPP1R26Q5T8A7 1209 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-216ENST00000489272 LYPD8Q6UX82 237 aa9.25□□□□□ -0.93
CBWD1-216ENST00000489272 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-216ENST00000489272 TRMT44Q8IYL2 757 aaKnown RBP9.24□□□□□ -0.93
CBWD1-216ENST00000489272 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
CBWD1-216ENST00000489272 DOC2BQ14184 412 aa9.23□□□□□ -0.93
CBWD1-216ENST00000489272 GRIN2CQ14957 1233 aa9.23□□□□□ -0.93
CBWD1-216ENST00000489272 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
CBWD1-216ENST00000489272 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
CBWD1-216ENST00000489272 MAP10Q9P2G4 905 aa9.23□□□□□ -0.93
CBWD1-216ENST00000489272 F12P00748 615 aaPredicted RBP9.22□□□□□ -0.93
CBWD1-216ENST00000489272 AGBL1Q96MI9 1066 aa9.21□□□□□ -0.94
CBWD1-216ENST00000489272 KRTAP4-9Q9BYQ8 210 aa9.21□□□□□ -0.94
CBWD1-216ENST00000489272 CHRNA4P43681 627 aa9.2□□□□□ -0.94
CBWD1-216ENST00000489272 RELBQ01201 579 aa9.2□□□□□ -0.94
CBWD1-216ENST00000489272 MTMR2Q13614 643 aa9.2□□□□□ -0.94
CBWD1-216ENST00000489272 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
CBWD1-216ENST00000489272 SHISA8B8ZZ34 492 aa9.19□□□□□ -0.94
CBWD1-216ENST00000489272 KRTAP4-2Q9BYR5 136 aa9.19□□□□□ -0.94
CBWD1-216ENST00000489272 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
CBWD1-216ENST00000489272 SUV39H2Q9H5I1 410 aa9.18□□□□□ -0.94
CBWD1-216ENST00000489272 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
CBWD1-216ENST00000489272 COBLO75128 1261 aa9.17□□□□□ -0.94
CBWD1-216ENST00000489272 MX2P20592 715 aa9.17□□□□□ -0.94
CBWD1-216ENST00000489272 DBN1Q16643 649 aa9.17□□□□□ -0.94
CBWD1-216ENST00000489272 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
CBWD1-216ENST00000489272 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
CBWD1-216ENST00000489272 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
CBWD1-216ENST00000489272 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
CBWD1-216ENST00000489272 PRPF38BQ5VTL8 546 aaKnown RBP9.15□□□□□ -0.94
CBWD1-216ENST00000489272 LYSMD3Q7Z3D4 306 aa9.15□□□□□ -0.94
CBWD1-216ENST00000489272 TRERF1Q96PN7 1200 aa9.15□□□□□ -0.94
CBWD1-216ENST00000489272 NDUFV2P19404 249 aa9.14□□□□□ -0.95
CBWD1-216ENST00000489272 GTPBP3Q969Y2 492 aaKnown RBP9.14□□□□□ -0.95
CBWD1-216ENST00000489272 ZNF395Q9H8N7 513 aaPredicted RBP9.14□□□□□ -0.95
CBWD1-216ENST00000489272 PIK3R2O00459 728 aa9.13□□□□□ -0.95
CBWD1-216ENST00000489272 GPCPD1Q9NPB8 672 aa9.13□□□□□ -0.95
CBWD1-216ENST00000489272 HOXB4P17483 251 aaPredicted RBP9.12□□□□□ -0.95
CBWD1-216ENST00000489272 MAP2K3P46734 347 aa9.12□□□□□ -0.95
CBWD1-216ENST00000489272 RSPO4Q2I0M5 234 aaPredicted RBP9.12□□□□□ -0.95
CBWD1-216ENST00000489272 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
CBWD1-216ENST00000489272 SH3BP5LQ7L8J4 393 aa9.11□□□□□ -0.95
CBWD1-216ENST00000489272 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
CBWD1-216ENST00000489272 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
CBWD1-216ENST00000489272 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
CBWD1-216ENST00000489272 GNB5O14775 395 aa9.1□□□□□ -0.95
CBWD1-216ENST00000489272 IRF6O14896 467 aa9.1□□□□□ -0.95
CBWD1-216ENST00000489272 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
CBWD1-216ENST00000489272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
CBWD1-216ENST00000489272 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
CBWD1-216ENST00000489272 MAGEB6P1A0A0J9YX57 407 aa9.09□□□□□ -0.95
CBWD1-216ENST00000489272 H7C1W4 665 aa9.09□□□□□ -0.95
CBWD1-216ENST00000489272 CLCN1P35523 988 aa9.09□□□□□ -0.95
CBWD1-216ENST00000489272 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
CBWD1-216ENST00000489272 EDARADDQ8WWZ3 215 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms