RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
CCL20-204ENST00000489160 DZIP3Q86Y13 1208 aaKnown RBP9.37□□□□□ -0.91
CCL20-204ENST00000489160 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
CCL20-204ENST00000489160 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
CCL20-204ENST00000489160 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
CCL20-204ENST00000489160 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
CCL20-204ENST00000489160 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
CCL20-204ENST00000489160 C1QTNF2Q9BXJ5 285 aa9.36□□□□□ -0.91
CCL20-204ENST00000489160 IRX2Q9BZI1 471 aaPredicted RBP9.36□□□□□ -0.91
CCL20-204ENST00000489160 ATP9BO43861 1147 aa9.35□□□□□ -0.91
CCL20-204ENST00000489160 GFRA3O60609 400 aa9.35□□□□□ -0.91
CCL20-204ENST00000489160 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
CCL20-204ENST00000489160 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CCL20-204ENST00000489160 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
CCL20-204ENST00000489160 TTC24A2A3L6 582 aaPredicted RBP9.34□□□□□ -0.91
CCL20-204ENST00000489160 NRG2O14511 850 aaPredicted RBP9.34□□□□□ -0.91
CCL20-204ENST00000489160 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
CCL20-204ENST00000489160 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
CCL20-204ENST00000489160 SLC10A4Q96EP9 437 aa9.34□□□□□ -0.91
CCL20-204ENST00000489160 TOR4AQ9NXH8 423 aa9.34□□□□□ -0.91
CCL20-204ENST00000489160 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
CCL20-204ENST00000489160 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
CCL20-204ENST00000489160 RFX1P22670 979 aa9.33□□□□□ -0.92
CCL20-204ENST00000489160 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
CCL20-204ENST00000489160 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
CCL20-204ENST00000489160 CDV3Q9UKY7 258 aaKnown RBP9.33□□□□□ -0.92
CCL20-204ENST00000489160 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
CCL20-204ENST00000489160 MAP4K5Q9Y4K4 846 aa9.32□□□□□ -0.92
CCL20-204ENST00000489160 SKIP12755 728 aa9.31□□□□□ -0.92
CCL20-204ENST00000489160 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
CCL20-204ENST00000489160 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
CCL20-204ENST00000489160 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
CCL20-204ENST00000489160 ALDH1A1P00352 501 aa9.3□□□□□ -0.92
CCL20-204ENST00000489160 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
CCL20-204ENST00000489160 NBPF20Q3BBV1 942 aa9.3□□□□□ -0.92
CCL20-204ENST00000489160 USP17L5A8MUK1 530 aa9.29□□□□□ -0.92
CCL20-204ENST00000489160 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
CCL20-204ENST00000489160 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
CCL20-204ENST00000489160 PLEKHM2Q8IWE5 1019 aa9.29□□□□□ -0.92
CCL20-204ENST00000489160 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
CCL20-204ENST00000489160 GIGYF1O75420 1035 aaPredicted RBP9.28□□□□□ -0.92
CCL20-204ENST00000489160 DGAT1O75907 488 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 MAP7D1Q3KQU3 841 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
CCL20-204ENST00000489160 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 PLPP7Q8NBV4 271 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 TLL2Q9Y6L7 1015 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
CCL20-204ENST00000489160 J3QL48 77 aa9.27□□□□□ -0.93
CCL20-204ENST00000489160 ADH1CP00326 375 aa9.27□□□□□ -0.93
CCL20-204ENST00000489160 SMPD1P17405 629 aa9.27□□□□□ -0.93
CCL20-204ENST00000489160 NR5A1Q13285 461 aa9.27□□□□□ -0.93
CCL20-204ENST00000489160 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
CCL20-204ENST00000489160 FAM187AA6NFU0 413 aa9.26□□□□□ -0.93
CCL20-204ENST00000489160 ESPNB1AK53 854 aa9.26□□□□□ -0.93
CCL20-204ENST00000489160 GRM5P41594 1212 aa9.26□□□□□ -0.93
CCL20-204ENST00000489160 PKDCCQ504Y2 493 aa9.26□□□□□ -0.93
CCL20-204ENST00000489160 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
CCL20-204ENST00000489160 VRTNQ9H8Y1 702 aa9.26□□□□□ -0.93
CCL20-204ENST00000489160 KANK4Q5T7N3 995 aaPredicted RBP9.25□□□□□ -0.93
CCL20-204ENST00000489160 KCTD15Q96SI1 283 aaPredicted RBP9.25□□□□□ -0.93
CCL20-204ENST00000489160 DOLKQ9UPQ8 538 aa9.25□□□□□ -0.93
CCL20-204ENST00000489160 PDIA4P13667 645 aaKnown RBP9.24□□□□□ -0.93
CCL20-204ENST00000489160 NCOA4Q13772 614 aa9.24□□□□□ -0.93
CCL20-204ENST00000489160 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
CCL20-204ENST00000489160 RETREG2Q8NC44 543 aa9.24□□□□□ -0.93
CCL20-204ENST00000489160 ATG7O95352 703 aa9.23□□□□□ -0.93
CCL20-204ENST00000489160 PDE4CQ08493 712 aa9.23□□□□□ -0.93
CCL20-204ENST00000489160 EML3Q32P44 896 aa9.23□□□□□ -0.93
CCL20-204ENST00000489160 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
CCL20-204ENST00000489160 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
CCL20-204ENST00000489160 AVPP01185 164 aa9.22□□□□□ -0.93
CCL20-204ENST00000489160 NNTQ13423 1086 aa9.22□□□□□ -0.93
CCL20-204ENST00000489160 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
CCL20-204ENST00000489160 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
CCL20-204ENST00000489160 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
CCL20-204ENST00000489160 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.94
CCL20-204ENST00000489160 FSHRP23945 695 aa9.21□□□□□ -0.94
CCL20-204ENST00000489160 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
CCL20-204ENST00000489160 TSGA10IPQ3SY00 556 aa9.21□□□□□ -0.94
CCL20-204ENST00000489160 INTS6LQ5JSJ4 861 aaKnown RBP9.2□□□□□ -0.94
CCL20-204ENST00000489160 TRIM50Q86XT4 487 aa9.2□□□□□ -0.94
CCL20-204ENST00000489160 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
CCL20-204ENST00000489160 HPS1Q92902 700 aa9.2□□□□□ -0.94
CCL20-204ENST00000489160 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
CCL20-204ENST00000489160 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
CCL20-204ENST00000489160 PCDHB11Q9Y5F2 797 aa9.2□□□□□ -0.94
CCL20-204ENST00000489160 RAB15P59190 212 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
CCL20-204ENST00000489160 CTC1Q2NKJ3 1217 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 USTQ9Y2C2 406 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
CCL20-204ENST00000489160 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms