RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
SRRM1-216ENST00000489130 USP47Q96K76 1375 aa17.69■□□□□ 0.42
SRRM1-216ENST00000489130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
SRRM1-216ENST00000489130 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
SRRM1-216ENST00000489130 DISP2A7MBM2 1401 aa17.68■□□□□ 0.42
SRRM1-216ENST00000489130 BAG6P46379 1132 aa17.68■□□□□ 0.42
SRRM1-216ENST00000489130 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
SRRM1-216ENST00000489130 NME9Q86XW9 330 aa17.68■□□□□ 0.42
SRRM1-216ENST00000489130 PARP4Q9UKK3 1724 aaKnown RBP17.68■□□□□ 0.42
SRRM1-216ENST00000489130 WDR17Q8IZU2 1322 aa17.68■□□□□ 0.42
SRRM1-216ENST00000489130 SOX12O15370 315 aa17.67■□□□□ 0.42
SRRM1-216ENST00000489130 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
SRRM1-216ENST00000489130 OVOS2A0A0J9YW53 1432 aa17.66■□□□□ 0.42
SRRM1-216ENST00000489130 OVOS2Q6IE36 1432 aa17.66■□□□□ 0.42
SRRM1-216ENST00000489130 PDE3BQ13370 1112 aa17.66■□□□□ 0.42
SRRM1-216ENST00000489130 TOM1L2Q6ZVM7 507 aa17.66■□□□□ 0.42
SRRM1-216ENST00000489130 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
SRRM1-216ENST00000489130 LRRC37A3O60309 1634 aa17.63■□□□□ 0.41
SRRM1-216ENST00000489130 TMF1P82094 1093 aa17.63■□□□□ 0.41
SRRM1-216ENST00000489130 SRCAPQ6ZRS2 3230 aa17.62■□□□□ 0.41
SRRM1-216ENST00000489130 EN1Q05925 392 aaPredicted RBP17.62■□□□□ 0.41
SRRM1-216ENST00000489130 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
SRRM1-216ENST00000489130 RGPD5Q99666 1765 aa17.61■□□□□ 0.41
SRRM1-216ENST00000489130 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
SRRM1-216ENST00000489130 TRIM37O94972 964 aa17.61■□□□□ 0.41
SRRM1-216ENST00000489130 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
SRRM1-216ENST00000489130 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
SRRM1-216ENST00000489130 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
SRRM1-216ENST00000489130 CDCA7Q9BWT1 371 aaPredicted RBP17.6■□□□□ 0.41
SRRM1-216ENST00000489130 PEAK1Q9H792 1746 aa17.6■□□□□ 0.41
SRRM1-216ENST00000489130 LTN1O94822 1766 aa17.59■□□□□ 0.41
SRRM1-216ENST00000489130 OVOS2A0A0G2JMS6 1433 aa17.59■□□□□ 0.41
SRRM1-216ENST00000489130 CCDC7Q96M83 1385 aa17.59■□□□□ 0.41
SRRM1-216ENST00000489130 ERBB3P21860 1342 aa17.59■□□□□ 0.41
SRRM1-216ENST00000489130 DDB1Q16531 1140 aa17.59■□□□□ 0.41
SRRM1-216ENST00000489130 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.4
SRRM1-216ENST00000489130 CDCA8Q53HL2 280 aa17.58■□□□□ 0.4
SRRM1-216ENST00000489130 CAMKK2Q96RR4 588 aa17.57■□□□□ 0.4
SRRM1-216ENST00000489130 APBA3O96018 575 aa17.56■□□□□ 0.4
SRRM1-216ENST00000489130 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
SRRM1-216ENST00000489130 BCL9O00512 1426 aa17.55■□□□□ 0.4
SRRM1-216ENST00000489130 COG3Q96JB2 828 aa17.55■□□□□ 0.4
SRRM1-216ENST00000489130 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
SRRM1-216ENST00000489130 MARCH10Q8NA82 808 aaPredicted RBP17.53■□□□□ 0.4
SRRM1-216ENST00000489130 CCER1Q8TC90 406 aaPredicted RBP17.53■□□□□ 0.4
SRRM1-216ENST00000489130 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SRRM1-216ENST00000489130 IP6K1Q92551 441 aa17.53■□□□□ 0.4
SRRM1-216ENST00000489130 MYOM1P52179 1685 aa17.52■□□□□ 0.4
SRRM1-216ENST00000489130 RREB1Q92766 1687 aa17.52■□□□□ 0.4
SRRM1-216ENST00000489130 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
SRRM1-216ENST00000489130 MAP3K19Q56UN5 1328 aa17.51■□□□□ 0.39
SRRM1-216ENST00000489130 FYB1O15117 783 aa17.51■□□□□ 0.39
SRRM1-216ENST00000489130 PSDA5PKW4 1024 aaPredicted RBP17.5■□□□□ 0.39
SRRM1-216ENST00000489130 EXOC5O00471 708 aa17.5■□□□□ 0.39
SRRM1-216ENST00000489130 SBF2Q86WG5 1849 aa17.49■□□□□ 0.39
SRRM1-216ENST00000489130 FAM208AQ9UK61 1670 aaKnown RBP17.49■□□□□ 0.39
SRRM1-216ENST00000489130 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
SRRM1-216ENST00000489130 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
SRRM1-216ENST00000489130 LRP5O75197 1615 aa17.49■□□□□ 0.39
SRRM1-216ENST00000489130 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
SRRM1-216ENST00000489130 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
SRRM1-216ENST00000489130 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
SRRM1-216ENST00000489130 IL2RBP14784 551 aa17.48■□□□□ 0.39
SRRM1-216ENST00000489130 FBLN1P23142 703 aa17.48■□□□□ 0.39
SRRM1-216ENST00000489130 HOXC9P31274 260 aa17.48■□□□□ 0.39
SRRM1-216ENST00000489130 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
SRRM1-216ENST00000489130 PLSCR1O15162 318 aa17.47■□□□□ 0.39
SRRM1-216ENST00000489130 R3HDM1Q15032 1099 aaKnown RBP17.47■□□□□ 0.39
SRRM1-216ENST00000489130 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
SRRM1-216ENST00000489130 KIF20BQ96Q89 1820 aa17.47■□□□□ 0.39
SRRM1-216ENST00000489130 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
SRRM1-216ENST00000489130 MSH5O43196 834 aa17.46■□□□□ 0.39
SRRM1-216ENST00000489130 AMPHP49418 695 aa17.46■□□□□ 0.39
SRRM1-216ENST00000489130 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
SRRM1-216ENST00000489130 RRS1Q15050 365 aaKnown RBP17.45■□□□□ 0.38
SRRM1-216ENST00000489130 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
SRRM1-216ENST00000489130 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
SRRM1-216ENST00000489130 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
SRRM1-216ENST00000489130 NBPF14Q5TI25 921 aa17.42■□□□□ 0.38
SRRM1-216ENST00000489130 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
SRRM1-216ENST00000489130 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
SRRM1-216ENST00000489130 INSRP06213 1382 aa17.4■□□□□ 0.38
SRRM1-216ENST00000489130 FLT4P35916 1363 aa17.4■□□□□ 0.38
SRRM1-216ENST00000489130 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.38
SRRM1-216ENST00000489130 KCNQ2O43526 872 aa17.39■□□□□ 0.37
SRRM1-216ENST00000489130 PROM2Q8N271 834 aa17.39■□□□□ 0.37
SRRM1-216ENST00000489130 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
SRRM1-216ENST00000489130 MEGF6O75095 1541 aa17.38■□□□□ 0.37
SRRM1-216ENST00000489130 RGPD2P0DJD1 1756 aa17.38■□□□□ 0.37
SRRM1-216ENST00000489130 HSP90AB2PQ58FF8 381 aa17.37■□□□□ 0.37
SRRM1-216ENST00000489130 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
SRRM1-216ENST00000489130 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
SRRM1-216ENST00000489130 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
SRRM1-216ENST00000489130 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
SRRM1-216ENST00000489130 ANKRD26Q9UPS8 1709 aa17.36■□□□□ 0.37
SRRM1-216ENST00000489130 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
SRRM1-216ENST00000489130 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
SRRM1-216ENST00000489130 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
SRRM1-216ENST00000489130 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
SRRM1-216ENST00000489130 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms