RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 LMO7Q8WWI1 1683 aa21.43■■□□□ 1.02
CLDN11-208ENST00000488989 ZC3H6P61129 1189 aaKnown RBP21.42■■□□□ 1.02
CLDN11-208ENST00000488989 KIAA0232Q92628 1395 aa21.42■■□□□ 1.02
CLDN11-208ENST00000488989 PLEKHG5O94827 1062 aa21.41■■□□□ 1.02
CLDN11-208ENST00000488989 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
CLDN11-208ENST00000488989 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
CLDN11-208ENST00000488989 EIF4A2Q14240 407 aaKnown RBP21.4■■□□□ 1.02
CLDN11-208ENST00000488989 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
CLDN11-208ENST00000488989 HSPA1LP34931 641 aa21.39■■□□□ 1.01
CLDN11-208ENST00000488989 ADAMTS8Q9UP79 889 aa21.39■■□□□ 1.01
CLDN11-208ENST00000488989 COL14A1Q05707 1796 aaKnown RBP21.38■■□□□ 1.01
CLDN11-208ENST00000488989 FAM208AQ9UK61 1670 aaKnown RBP21.37■■□□□ 1.01
CLDN11-208ENST00000488989 CAMTA1Q9Y6Y1 1673 aa21.37■■□□□ 1.01
CLDN11-208ENST00000488989 HAP1P54257 671 aaPredicted RBP21.37■■□□□ 1.01
CLDN11-208ENST00000488989 RGPD2P0DJD1 1756 aa21.37■■□□□ 1.01
CLDN11-208ENST00000488989 AXIN2Q9Y2T1 843 aa21.36■■□□□ 1.01
CLDN11-208ENST00000488989 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
CLDN11-208ENST00000488989 SPATA31A6Q5VVP1 1343 aa21.34■■□□□ 1.01
CLDN11-208ENST00000488989 IGSF1Q8N6C5 1336 aa21.33■■□□□ 1.01
CLDN11-208ENST00000488989 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
CLDN11-208ENST00000488989 ZBTB7CA1YPR0 619 aa21.33■■□□□ 1.01
CLDN11-208ENST00000488989 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1.01
CLDN11-208ENST00000488989 U2AF1L5P0DN76 240 aaPredicted RBP21.33■■□□□ 1.01
CLDN11-208ENST00000488989 U2AF1Q01081 240 aaKnown RBP eCLIP21.33■■□□□ 1.01
CLDN11-208ENST00000488989 CHRNA2Q15822 529 aa21.33■■□□□ 1.01
CLDN11-208ENST00000488989 ERBB3P21860 1342 aa21.32■■□□□ 1
CLDN11-208ENST00000488989 FAM83GA6ND36 823 aa21.32■■□□□ 1
CLDN11-208ENST00000488989 KDRP35968 1356 aa21.32■■□□□ 1
CLDN11-208ENST00000488989 PLCH1Q4KWH8 1693 aa21.31■■□□□ 1
CLDN11-208ENST00000488989 FCHSD2O94868 740 aa21.31■■□□□ 1
CLDN11-208ENST00000488989 ANKRD24Q8TF21 1146 aa21.31■■□□□ 1
CLDN11-208ENST00000488989 EYA1Q99502 592 aa21.31■■□□□ 1
CLDN11-208ENST00000488989 NWD2Q9ULI1 1742 aa21.31■■□□□ 1
CLDN11-208ENST00000488989 COL5A2P05997 1499 aaPredicted RBP21.3■■□□□ 1
CLDN11-208ENST00000488989 RSPH6AQ9H0K4 717 aa21.29■■□□□ 1
CLDN11-208ENST00000488989 FBXO41Q8TF61 875 aa21.28■■□□□ 1
CLDN11-208ENST00000488989 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
CLDN11-208ENST00000488989 PLEKHF1Q96S99 279 aa21.28■■□□□ 1
CLDN11-208ENST00000488989 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
CLDN11-208ENST00000488989 NRAPQ86VF7 1730 aa21.28■■□□□ 1
CLDN11-208ENST00000488989 LRP6O75581 1613 aa21.27■■□□□ 1
CLDN11-208ENST00000488989 RUNDC1Q96C34 613 aa21.27■■□□□ 1
CLDN11-208ENST00000488989 NBPF6Q5VWK0 638 aa21.26■□□□□ 0.99
CLDN11-208ENST00000488989 NBPF4Q96M43 638 aa21.26■□□□□ 0.99
CLDN11-208ENST00000488989 SLIT2O94813 1529 aa21.25■□□□□ 0.99
CLDN11-208ENST00000488989 SULT6B1Q6IMI4 303 aa21.25■□□□□ 0.99
CLDN11-208ENST00000488989 WDR17Q8IZU2 1322 aa21.25■□□□□ 0.99
CLDN11-208ENST00000488989 NUTM2BA6NNL0 878 aaPredicted RBP21.24■□□□□ 0.99
CLDN11-208ENST00000488989 NUTM2EB1AL46 878 aaPredicted RBP21.24■□□□□ 0.99
CLDN11-208ENST00000488989 ADAMTS2O95450 1211 aa21.24■□□□□ 0.99
CLDN11-208ENST00000488989 HMOX1P09601 288 aa21.24■□□□□ 0.99
CLDN11-208ENST00000488989 AEBP1Q8IUX7 1158 aa21.24■□□□□ 0.99
CLDN11-208ENST00000488989 NUTM2AQ8IVF1 878 aaPredicted RBP21.24■□□□□ 0.99
CLDN11-208ENST00000488989 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
CLDN11-208ENST00000488989 PRKAR2BP31323 418 aa21.22■□□□□ 0.99
CLDN11-208ENST00000488989 HNRNPUQ00839 825 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLDN11-208ENST00000488989 NCBP3Q53F19 620 aaKnown RBP21.22■□□□□ 0.99
CLDN11-208ENST00000488989 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
CLDN11-208ENST00000488989 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.21■□□□□ 0.99
CLDN11-208ENST00000488989 NGEFQ8N5V2 710 aa21.21■□□□□ 0.99
CLDN11-208ENST00000488989 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
CLDN11-208ENST00000488989 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
CLDN11-208ENST00000488989 PLEKHG2Q9H7P9 1386 aa21.21■□□□□ 0.99
CLDN11-208ENST00000488989 APAF1O14727 1248 aa21.19■□□□□ 0.98
CLDN11-208ENST00000488989 CSB-PGBD3P0DP91 1061 aa21.19■□□□□ 0.98
CLDN11-208ENST00000488989 CARD10Q9BWT7 1032 aa21.19■□□□□ 0.98
CLDN11-208ENST00000488989 CRB1P82279 1406 aa21.19■□□□□ 0.98
CLDN11-208ENST00000488989 FNBP4Q8N3X1 1017 aaPredicted RBP21.18■□□□□ 0.98
CLDN11-208ENST00000488989 TCP11L2Q8N4U5 519 aa21.18■□□□□ 0.98
CLDN11-208ENST00000488989 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
CLDN11-208ENST00000488989 ZBED9Q6R2W3 1325 aa21.18■□□□□ 0.98
CLDN11-208ENST00000488989 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
CLDN11-208ENST00000488989 EVA1CP58658 441 aa21.17■□□□□ 0.98
CLDN11-208ENST00000488989 PHACTR3Q96KR7 559 aa21.17■□□□□ 0.98
CLDN11-208ENST00000488989 NLRP2Q9NX02 1062 aa21.17■□□□□ 0.98
CLDN11-208ENST00000488989 WNK3Q9BYP7 1800 aa21.16■□□□□ 0.98
CLDN11-208ENST00000488989 NEFMP07197 916 aa21.16■□□□□ 0.98
CLDN11-208ENST00000488989 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
CLDN11-208ENST00000488989 STRN4Q9NRL3 753 aa21.16■□□□□ 0.98
CLDN11-208ENST00000488989 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
CLDN11-208ENST00000488989 TMPOP42166 694 aaKnown RBP21.15■□□□□ 0.98
CLDN11-208ENST00000488989 TOM1L2Q6ZVM7 507 aa21.15■□□□□ 0.98
CLDN11-208ENST00000488989 PKD1L3Q7Z443 1732 aa21.15■□□□□ 0.98
CLDN11-208ENST00000488989 BCL9LQ86UU0 1499 aa21.14■□□□□ 0.98
CLDN11-208ENST00000488989 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
CLDN11-208ENST00000488989 NFE2L2Q16236 605 aa21.13■□□□□ 0.97
CLDN11-208ENST00000488989 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
CLDN11-208ENST00000488989 NGLY1Q96IV0 654 aa21.13■□□□□ 0.97
CLDN11-208ENST00000488989 C8orf37Q96NL8 207 aa21.13■□□□□ 0.97
CLDN11-208ENST00000488989 ZNF521Q96K83 1311 aa21.12■□□□□ 0.97
CLDN11-208ENST00000488989 UNC5CLQ8IV45 518 aa21.12■□□□□ 0.97
CLDN11-208ENST00000488989 MEGF6O75095 1541 aa21.12■□□□□ 0.97
CLDN11-208ENST00000488989 GAS2L2Q8NHY3 880 aa21.1■□□□□ 0.97
CLDN11-208ENST00000488989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.97
CLDN11-208ENST00000488989 DISP2A7MBM2 1401 aa21.1■□□□□ 0.97
CLDN11-208ENST00000488989 MTHFSDQ2M296 383 aaKnown RBP21.09■□□□□ 0.97
CLDN11-208ENST00000488989 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
CLDN11-208ENST00000488989 MEX3CQ5U5Q3 659 aaKnown RBP21.09■□□□□ 0.97
CLDN11-208ENST00000488989 RAPGEF4Q8WZA2 1011 aa21.09■□□□□ 0.97
CLDN11-208ENST00000488989 RRP7AQ9Y3A4 280 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms