RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
HDAC6-231ENST00000488905 OVOS2A0A0G2JMS6 1433 aa26.33■■□□□ 1.81
HDAC6-231ENST00000488905 OVOS2A0A0J9YW53 1432 aa26.33■■□□□ 1.81
HDAC6-231ENST00000488905 OVOS2Q6IE36 1432 aa26.33■■□□□ 1.81
HDAC6-231ENST00000488905 ZNF692Q9BU19 519 aaPredicted RBP26.33■■□□□ 1.81
HDAC6-231ENST00000488905 TTC21AQ8NDW8 1320 aa26.33■■□□□ 1.81
HDAC6-231ENST00000488905 ABCC6O95255 1503 aa26.31■■□□□ 1.8
HDAC6-231ENST00000488905 WDR17Q8IZU2 1322 aa26.3■■□□□ 1.8
HDAC6-231ENST00000488905 KTN1Q86UP2 1357 aaKnown RBP26.3■■□□□ 1.8
HDAC6-231ENST00000488905 TOM1L2Q6ZVM7 507 aa26.29■■□□□ 1.8
HDAC6-231ENST00000488905 KCNH5Q8NCM2 988 aa26.29■■□□□ 1.8
HDAC6-231ENST00000488905 C11orf95C9JLR9 678 aaPredicted RBP26.28■■□□□ 1.8
HDAC6-231ENST00000488905 AXIN2Q9Y2T1 843 aa26.28■■□□□ 1.8
HDAC6-231ENST00000488905 LTN1O94822 1766 aa26.28■■□□□ 1.8
HDAC6-231ENST00000488905 ARHGEF25Q86VW2 580 aa26.27■■□□□ 1.8
HDAC6-231ENST00000488905 CD163L1Q9NR16 1453 aa26.25■■□□□ 1.79
HDAC6-231ENST00000488905 SOX12O15370 315 aa26.25■■□□□ 1.79
HDAC6-231ENST00000488905 DDB1Q16531 1140 aa26.25■■□□□ 1.79
HDAC6-231ENST00000488905 CARD11Q9BXL7 1154 aa26.24■■□□□ 1.79
HDAC6-231ENST00000488905 TONSLQ96HA7 1378 aa26.21■■□□□ 1.79
HDAC6-231ENST00000488905 USP31Q70CQ4 1352 aa26.2■■□□□ 1.79
HDAC6-231ENST00000488905 CDCA7Q9BWT1 371 aaPredicted RBP26.2■■□□□ 1.78
HDAC6-231ENST00000488905 NBPF14Q5TI25 921 aa26.19■■□□□ 1.78
HDAC6-231ENST00000488905 CARD10Q9BWT7 1032 aa26.19■■□□□ 1.78
HDAC6-231ENST00000488905 BCL9O00512 1426 aa26.19■■□□□ 1.78
HDAC6-231ENST00000488905 CSB-PGBD3P0DP91 1061 aa26.18■■□□□ 1.78
HDAC6-231ENST00000488905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.17■■□□□ 1.78
HDAC6-231ENST00000488905 CCDC7Q96M83 1385 aa26.17■■□□□ 1.78
HDAC6-231ENST00000488905 TNS2Q63HR2 1409 aa26.16■■□□□ 1.78
HDAC6-231ENST00000488905 EDC4Q6P2E9 1401 aaKnown RBP26.15■■□□□ 1.78
HDAC6-231ENST00000488905 MARCH10Q8NA82 808 aaPredicted RBP26.15■■□□□ 1.78
HDAC6-231ENST00000488905 NME9Q86XW9 330 aa26.14■■□□□ 1.78
HDAC6-231ENST00000488905 CASZ1Q86V15 1759 aa26.13■■□□□ 1.77
HDAC6-231ENST00000488905 NHSQ6T4R5 1651 aa26.13■■□□□ 1.77
HDAC6-231ENST00000488905 A0A1W2PP64 1363 aa26.13■■□□□ 1.77
HDAC6-231ENST00000488905 PLSCR1O15162 318 aa26.13■■□□□ 1.77
HDAC6-231ENST00000488905 TMC1Q8TDI8 760 aa26.13■■□□□ 1.77
HDAC6-231ENST00000488905 BCL11BQ9C0K0 894 aaPredicted RBP26.13■■□□□ 1.77
HDAC6-231ENST00000488905 HDGFL2Q7Z4V5 671 aaPredicted RBP26.12■■□□□ 1.77
HDAC6-231ENST00000488905 ERBB3P21860 1342 aa26.12■■□□□ 1.77
HDAC6-231ENST00000488905 PTF1AQ7RTS3 328 aa26.11■■□□□ 1.77
HDAC6-231ENST00000488905 FAM208AQ9UK61 1670 aaKnown RBP26.1■■□□□ 1.77
HDAC6-231ENST00000488905 SLC12A5Q9H2X9 1139 aa26.1■■□□□ 1.77
HDAC6-231ENST00000488905 PUS7Q96PZ0 661 aaKnown RBP26.07■■□□□ 1.76
HDAC6-231ENST00000488905 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
HDAC6-231ENST00000488905 TERF2IPQ9NYB0 399 aa26.07■■□□□ 1.76
HDAC6-231ENST00000488905 EXOC5O00471 708 aa26.06■■□□□ 1.76
HDAC6-231ENST00000488905 NINLQ9Y2I6 1382 aa26.06■■□□□ 1.76
HDAC6-231ENST00000488905 KAT6BQ8WYB5 2073 aa26.05■■□□□ 1.76
HDAC6-231ENST00000488905 BTAF1O14981 1849 aa26.04■■□□□ 1.76
HDAC6-231ENST00000488905 SPON1Q9HCB6 807 aa26.03■■□□□ 1.76
HDAC6-231ENST00000488905 NLRP2Q9NX02 1062 aa26.03■■□□□ 1.76
HDAC6-231ENST00000488905 TESK2Q96S53 571 aa26.02■■□□□ 1.76
HDAC6-231ENST00000488905 KCNQ2O43526 872 aa26.01■■□□□ 1.75
HDAC6-231ENST00000488905 PROM2Q8N271 834 aa26.01■■□□□ 1.75
HDAC6-231ENST00000488905 ANKRD24Q8TF21 1146 aa26.01■■□□□ 1.75
HDAC6-231ENST00000488905 ST20-MTHFSA0A0A6YYL1 179 aa25.99■■□□□ 1.75
HDAC6-231ENST00000488905 IL2RBP14784 551 aa25.99■■□□□ 1.75
HDAC6-231ENST00000488905 PPP1R1BQ9UD71 204 aaPredicted RBP25.99■■□□□ 1.75
HDAC6-231ENST00000488905 PAPPAQ13219 1627 aa25.98■■□□□ 1.75
HDAC6-231ENST00000488905 RGPD2P0DJD1 1756 aa25.97■■□□□ 1.75
HDAC6-231ENST00000488905 TXNRD1Q16881 649 aa25.97■■□□□ 1.75
HDAC6-231ENST00000488905 MYOM1P52179 1685 aa25.96■■□□□ 1.75
HDAC6-231ENST00000488905 SLC24A1O60721 1099 aa25.94■■□□□ 1.74
HDAC6-231ENST00000488905 ACSBG1Q96GR2 724 aa25.94■■□□□ 1.74
HDAC6-231ENST00000488905 SHANK3Q9BYB0 1731 aa25.94■■□□□ 1.74
HDAC6-231ENST00000488905 ANKRD36BQ8N2N9 1353 aa25.94■■□□□ 1.74
HDAC6-231ENST00000488905 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
HDAC6-231ENST00000488905 IP6K1Q92551 441 aa25.93■■□□□ 1.74
HDAC6-231ENST00000488905 COG3Q96JB2 828 aa25.92■■□□□ 1.74
HDAC6-231ENST00000488905 PDGFDQ9GZP0 370 aaPredicted RBP25.92■■□□□ 1.74
HDAC6-231ENST00000488905 STK32BQ9NY57 414 aa25.92■■□□□ 1.74
HDAC6-231ENST00000488905 DOT1LQ8TEK3 1739 aa25.91■■□□□ 1.74
HDAC6-231ENST00000488905 USP47Q96K76 1375 aa25.9■■□□□ 1.74
HDAC6-231ENST00000488905 MAP3K19Q56UN5 1328 aa25.89■■□□□ 1.74
HDAC6-231ENST00000488905 UTRNP46939 3433 aa25.89■■□□□ 1.74
HDAC6-231ENST00000488905 SLC15A2Q16348 729 aa25.89■■□□□ 1.74
HDAC6-231ENST00000488905 ZBTB7AO95365 584 aa25.88■■□□□ 1.73
HDAC6-231ENST00000488905 LTV1Q96GA3 475 aaPredicted RBP25.88■■□□□ 1.73
HDAC6-231ENST00000488905 RTL1A6NKG5 1358 aa25.87■■□□□ 1.73
HDAC6-231ENST00000488905 QSER1Q2KHR3 1735 aa25.86■■□□□ 1.73
HDAC6-231ENST00000488905 HOXC9P31274 260 aa25.86■■□□□ 1.73
HDAC6-231ENST00000488905 TRIM26Q12899 539 aaPredicted RBP25.86■■□□□ 1.73
HDAC6-231ENST00000488905 PTGER2P43116 358 aa25.84■■□□□ 1.73
HDAC6-231ENST00000488905 AMPHP49418 695 aa25.84■■□□□ 1.73
HDAC6-231ENST00000488905 TMF1P82094 1093 aa25.84■■□□□ 1.73
HDAC6-231ENST00000488905 MEGF6O75095 1541 aa25.83■■□□□ 1.73
HDAC6-231ENST00000488905 TUBGCP6Q96RT7 1819 aa25.83■■□□□ 1.73
HDAC6-231ENST00000488905 LY75O60449 1722 aa25.83■■□□□ 1.72
HDAC6-231ENST00000488905 FBLN1P23142 703 aa25.82■■□□□ 1.72
HDAC6-231ENST00000488905 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
HDAC6-231ENST00000488905 ATF5Q9Y2D1 282 aaPredicted RBP25.81■■□□□ 1.72
HDAC6-231ENST00000488905 MTFR1LQ9H019 292 aa25.8■■□□□ 1.72
HDAC6-231ENST00000488905 DCAF8L1A6NGE4 600 aa25.79■■□□□ 1.72
HDAC6-231ENST00000488905 FYB1O15117 783 aa25.78■■□□□ 1.72
HDAC6-231ENST00000488905 YY1P25490 414 aa25.78■■□□□ 1.72
HDAC6-231ENST00000488905 RRS1Q15050 365 aaKnown RBP25.78■■□□□ 1.72
HDAC6-231ENST00000488905 GGNBP2Q9H3C7 697 aa25.78■■□□□ 1.72
HDAC6-231ENST00000488905 SMG6Q86US8 1419 aaKnown RBP25.78■■□□□ 1.72
HDAC6-231ENST00000488905 ZNF827Q17R98 1081 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms