RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
TRAIP-209ENST00000488860 NWD2Q9ULI1 1742 aa16.62■□□□□ 0.25
TRAIP-209ENST00000488860 MTHFSP49914 203 aa16.61■□□□□ 0.25
TRAIP-209ENST00000488860 MIER1Q8N108 512 aa16.61■□□□□ 0.25
TRAIP-209ENST00000488860 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
TRAIP-209ENST00000488860 FLT4P35916 1363 aa16.61■□□□□ 0.25
TRAIP-209ENST00000488860 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
TRAIP-209ENST00000488860 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
TRAIP-209ENST00000488860 HOXC9P31274 260 aa16.59■□□□□ 0.25
TRAIP-209ENST00000488860 COL3A1P02461 1466 aaPredicted RBP16.59■□□□□ 0.25
TRAIP-209ENST00000488860 CFAP53Q96M91 514 aa16.58■□□□□ 0.24
TRAIP-209ENST00000488860 KIF24Q5T7B8 1368 aa16.58■□□□□ 0.24
TRAIP-209ENST00000488860 BLMP54132 1417 aaPredicted RBP16.58■□□□□ 0.24
TRAIP-209ENST00000488860 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
TRAIP-209ENST00000488860 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
TRAIP-209ENST00000488860 IP6K1Q92551 441 aa16.56■□□□□ 0.24
TRAIP-209ENST00000488860 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
TRAIP-209ENST00000488860 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
TRAIP-209ENST00000488860 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
TRAIP-209ENST00000488860 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
TRAIP-209ENST00000488860 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
TRAIP-209ENST00000488860 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
TRAIP-209ENST00000488860 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-209ENST00000488860 INSRP06213 1382 aa16.54■□□□□ 0.24
TRAIP-209ENST00000488860 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
TRAIP-209ENST00000488860 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-209ENST00000488860 WNK3Q9BYP7 1800 aa16.54■□□□□ 0.24
TRAIP-209ENST00000488860 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
TRAIP-209ENST00000488860 BTG4Q9NY30 223 aa16.53■□□□□ 0.24
TRAIP-209ENST00000488860 AXIN2Q9Y2T1 843 aa16.53■□□□□ 0.24
TRAIP-209ENST00000488860 SLIT2O94813 1529 aa16.52■□□□□ 0.24
TRAIP-209ENST00000488860 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
TRAIP-209ENST00000488860 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.24
TRAIP-209ENST00000488860 NGLY1Q96IV0 654 aa16.52■□□□□ 0.24
TRAIP-209ENST00000488860 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
TRAIP-209ENST00000488860 DIAPH1O60610 1272 aaKnown RBP16.51■□□□□ 0.23
TRAIP-209ENST00000488860 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
TRAIP-209ENST00000488860 ERBB3P21860 1342 aa16.5■□□□□ 0.23
TRAIP-209ENST00000488860 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
TRAIP-209ENST00000488860 EVA1CP58658 441 aa16.5■□□□□ 0.23
TRAIP-209ENST00000488860 AFF2P51816 1311 aa16.48■□□□□ 0.23
TRAIP-209ENST00000488860 IL13P35225 146 aa16.48■□□□□ 0.23
TRAIP-209ENST00000488860 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAIP-209ENST00000488860 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
TRAIP-209ENST00000488860 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
TRAIP-209ENST00000488860 WDR17Q8IZU2 1322 aa16.47■□□□□ 0.23
TRAIP-209ENST00000488860 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
TRAIP-209ENST00000488860 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
TRAIP-209ENST00000488860 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
TRAIP-209ENST00000488860 USP21Q9UK80 565 aa16.46■□□□□ 0.23
TRAIP-209ENST00000488860 CRB1P82279 1406 aa16.45■□□□□ 0.22
TRAIP-209ENST00000488860 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
TRAIP-209ENST00000488860 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAIP-209ENST00000488860 LARP1Q6PKG0 1096 aaKnown RBP16.45■□□□□ 0.22
TRAIP-209ENST00000488860 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
TRAIP-209ENST00000488860 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
TRAIP-209ENST00000488860 UNC5CLQ8IV45 518 aa16.44■□□□□ 0.22
TRAIP-209ENST00000488860 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
TRAIP-209ENST00000488860 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
TRAIP-209ENST00000488860 EYA1Q99502 592 aa16.44■□□□□ 0.22
TRAIP-209ENST00000488860 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
TRAIP-209ENST00000488860 HMOX1P09601 288 aa16.43■□□□□ 0.22
TRAIP-209ENST00000488860 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
TRAIP-209ENST00000488860 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
TRAIP-209ENST00000488860 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
TRAIP-209ENST00000488860 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
TRAIP-209ENST00000488860 AEBP1Q8IUX7 1158 aa16.41■□□□□ 0.22
TRAIP-209ENST00000488860 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
TRAIP-209ENST00000488860 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-209ENST00000488860 NCAPD2Q15021 1401 aa16.41■□□□□ 0.22
TRAIP-209ENST00000488860 GLI3P10071 1580 aa16.41■□□□□ 0.22
TRAIP-209ENST00000488860 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
TRAIP-209ENST00000488860 PKD1L3Q7Z443 1732 aa16.4■□□□□ 0.22
TRAIP-209ENST00000488860 ATRNO75882 1429 aa16.4■□□□□ 0.22
TRAIP-209ENST00000488860 DLG5Q8TDM6 1919 aa16.4■□□□□ 0.22
TRAIP-209ENST00000488860 CARD10Q9BWT7 1032 aa16.39■□□□□ 0.21
TRAIP-209ENST00000488860 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
TRAIP-209ENST00000488860 MEGF6O75095 1541 aa16.39■□□□□ 0.21
TRAIP-209ENST00000488860 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
TRAIP-209ENST00000488860 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 VPS72Q15906 364 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 SPATA31A7Q8IWB4 1347 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 KDRP35968 1356 aa16.38■□□□□ 0.21
TRAIP-209ENST00000488860 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
TRAIP-209ENST00000488860 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
TRAIP-209ENST00000488860 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
TRAIP-209ENST00000488860 ZNF772Q68DY9 489 aaPredicted RBP16.36■□□□□ 0.21
TRAIP-209ENST00000488860 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
TRAIP-209ENST00000488860 THSD7AQ9UPZ6 1657 aa16.36■□□□□ 0.21
TRAIP-209ENST00000488860 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
TRAIP-209ENST00000488860 MAPK8IP3Q9UPT6 1336 aa16.35■□□□□ 0.21
TRAIP-209ENST00000488860 BRWD3Q6RI45 1802 aa16.34■□□□□ 0.21
TRAIP-209ENST00000488860 A0A0G2JS52 829 aa16.34■□□□□ 0.21
TRAIP-209ENST00000488860 FCHSD2O94868 740 aa16.34■□□□□ 0.21
TRAIP-209ENST00000488860 NEFMP07197 916 aa16.34■□□□□ 0.21
TRAIP-209ENST00000488860 TATP17735 454 aaPredicted RBP16.34■□□□□ 0.21
TRAIP-209ENST00000488860 MYT1Q01538 1121 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms