RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 PRDM11Q9NQV5 511 aa9.11□□□□□ -0.95
PTPRD-212ENST00000488774 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
PTPRD-212ENST00000488774 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
PTPRD-212ENST00000488774 NINLQ9Y2I6 1382 aa9.11□□□□□ -0.95
PTPRD-212ENST00000488774 CDK12Q9NYV4 1490 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-212ENST00000488774 RXRBP28702 533 aa9.1□□□□□ -0.95
PTPRD-212ENST00000488774 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-212ENST00000488774 VPS72Q15906 364 aa9.1□□□□□ -0.95
PTPRD-212ENST00000488774 FAM182BQ5T319 152 aa9.1□□□□□ -0.95
PTPRD-212ENST00000488774 HDGFL2Q7Z4V5 671 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-212ENST00000488774 GJD4Q96KN9 370 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-212ENST00000488774 PANK3Q9H999 370 aa9.1□□□□□ -0.95
PTPRD-212ENST00000488774 STRN4Q9NRL3 753 aa9.1□□□□□ -0.95
PTPRD-212ENST00000488774 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
PTPRD-212ENST00000488774 SPATA31A5Q5VU36 1347 aa9.09□□□□□ -0.95
PTPRD-212ENST00000488774 SPATA31A7Q8IWB4 1347 aa9.09□□□□□ -0.95
PTPRD-212ENST00000488774 RBM6P78332 1123 aaKnown RBP9.09□□□□□ -0.95
PTPRD-212ENST00000488774 RRS1Q15050 365 aaKnown RBP9.09□□□□□ -0.95
PTPRD-212ENST00000488774 TERF2IPQ9NYB0 399 aa9.09□□□□□ -0.95
PTPRD-212ENST00000488774 TRPC5Q9UL62 973 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-212ENST00000488774 AATKQ6ZMQ8 1374 aa9.09□□□□□ -0.95
PTPRD-212ENST00000488774 MAP3K19Q56UN5 1328 aa9.08□□□□□ -0.96
PTPRD-212ENST00000488774 SPATA31A1Q5TZJ5 1347 aa9.08□□□□□ -0.96
PTPRD-212ENST00000488774 SOCS7O14512 581 aa9.08□□□□□ -0.96
PTPRD-212ENST00000488774 PER1O15534 1290 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-212ENST00000488774 FAM98CQ17RN3 349 aaKnown RBP9.08□□□□□ -0.96
PTPRD-212ENST00000488774 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
PTPRD-212ENST00000488774 ABCC6O95255 1503 aa9.07□□□□□ -0.96
PTPRD-212ENST00000488774 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
PTPRD-212ENST00000488774 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
PTPRD-212ENST00000488774 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
PTPRD-212ENST00000488774 ONECUT3O60422 494 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-212ENST00000488774 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-212ENST00000488774 SEPT12Q8IYM1 358 aa9.06□□□□□ -0.96
PTPRD-212ENST00000488774 USP35Q9P2H5 1018 aa9.06□□□□□ -0.96
PTPRD-212ENST00000488774 TOGARAM1Q9Y4F4 1720 aa9.05□□□□□ -0.96
PTPRD-212ENST00000488774 SRCAPQ6ZRS2 3230 aa9.05□□□□□ -0.96
PTPRD-212ENST00000488774 CRB1P82279 1406 aa9.05□□□□□ -0.96
PTPRD-212ENST00000488774 ITGB4P16144 1822 aa9.04□□□□□ -0.96
PTPRD-212ENST00000488774 HOXC9P31274 260 aa9.04□□□□□ -0.96
PTPRD-212ENST00000488774 TNNT2P45379 298 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-212ENST00000488774 PTF1AQ7RTS3 328 aa9.04□□□□□ -0.96
PTPRD-212ENST00000488774 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPRD-212ENST00000488774 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
PTPRD-212ENST00000488774 ERBB3P21860 1342 aa9.04□□□□□ -0.96
PTPRD-212ENST00000488774 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
PTPRD-212ENST00000488774 PKD1L3Q7Z443 1732 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 CDCA8Q53HL2 280 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 HSP90AB2PQ58FF8 381 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 IP6K1Q92551 441 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 LTV1Q96GA3 475 aaPredicted RBP9.03□□□□□ -0.96
PTPRD-212ENST00000488774 COG3Q96JB2 828 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 MEGF6O75095 1541 aa9.03□□□□□ -0.96
PTPRD-212ENST00000488774 DOT1LQ8TEK3 1739 aa9.02□□□□□ -0.96
PTPRD-212ENST00000488774 CNGB1Q14028 1251 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-212ENST00000488774 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.97
PTPRD-212ENST00000488774 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
PTPRD-212ENST00000488774 POLKQ9UBT6 870 aa9.02□□□□□ -0.97
PTPRD-212ENST00000488774 BTAF1O14981 1849 aa9.01□□□□□ -0.97
PTPRD-212ENST00000488774 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
PTPRD-212ENST00000488774 EVA1CP58658 441 aa9.01□□□□□ -0.97
PTPRD-212ENST00000488774 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
PTPRD-212ENST00000488774 NBPF6Q5VWK0 638 aa9.01□□□□□ -0.97
PTPRD-212ENST00000488774 SMG6Q86US8 1419 aaKnown RBP9.01□□□□□ -0.97
PTPRD-212ENST00000488774 NBPF4Q96M43 638 aa9.01□□□□□ -0.97
PTPRD-212ENST00000488774 COL3A1P02461 1466 aaPredicted RBP9.01□□□□□ -0.97
PTPRD-212ENST00000488774 RREB1Q92766 1687 aa9□□□□□ -0.97
PTPRD-212ENST00000488774 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
PTPRD-212ENST00000488774 BLMP54132 1417 aaPredicted RBP9□□□□□ -0.97
PTPRD-212ENST00000488774 NCAPD2Q15021 1401 aa9□□□□□ -0.97
PTPRD-212ENST00000488774 CC2D1BQ5T0F9 858 aaKnown RBP9□□□□□ -0.97
PTPRD-212ENST00000488774 BARGINQ6ZT62 677 aa9□□□□□ -0.97
PTPRD-212ENST00000488774 TCP11L2Q8N4U5 519 aa9□□□□□ -0.97
PTPRD-212ENST00000488774 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
PTPRD-212ENST00000488774 TOM1L2Q6ZVM7 507 aa8.99□□□□□ -0.97
PTPRD-212ENST00000488774 MARCH10Q8NA82 808 aaPredicted RBP8.99□□□□□ -0.97
PTPRD-212ENST00000488774 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
PTPRD-212ENST00000488774 NHSQ6T4R5 1651 aa8.99□□□□□ -0.97
PTPRD-212ENST00000488774 INSRP06213 1382 aa8.99□□□□□ -0.97
PTPRD-212ENST00000488774 TUBGCP6Q96RT7 1819 aa8.98□□□□□ -0.97
PTPRD-212ENST00000488774 DLG5Q8TDM6 1919 aa8.98□□□□□ -0.97
PTPRD-212ENST00000488774 KRT27Q7Z3Y8 459 aa8.98□□□□□ -0.97
PTPRD-212ENST00000488774 RTL1A6NKG5 1358 aa8.98□□□□□ -0.97
PTPRD-212ENST00000488774 FLT4P35916 1363 aa8.98□□□□□ -0.97
PTPRD-212ENST00000488774 PPM1GO15355 546 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-212ENST00000488774 AMPHP49418 695 aa8.97□□□□□ -0.97
PTPRD-212ENST00000488774 EIF4A2Q14240 407 aaKnown RBP8.97□□□□□ -0.97
PTPRD-212ENST00000488774 DEFB132Q7Z7B7 95 aa8.97□□□□□ -0.97
PTPRD-212ENST00000488774 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
PTPRD-212ENST00000488774 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
PTPRD-212ENST00000488774 A0A0G2JS52 829 aa8.96□□□□□ -0.98
PTPRD-212ENST00000488774 CSB-PGBD3P0DP91 1061 aa8.96□□□□□ -0.98
PTPRD-212ENST00000488774 MYT1Q01538 1121 aa8.96□□□□□ -0.98
PTPRD-212ENST00000488774 AEBP1Q8IUX7 1158 aa8.96□□□□□ -0.98
PTPRD-212ENST00000488774 EYA1Q99502 592 aa8.96□□□□□ -0.98
PTPRD-212ENST00000488774 NSD2O96028 1365 aa8.96□□□□□ -0.98
PTPRD-212ENST00000488774 LY75O60449 1722 aa8.95□□□□□ -0.98
PTPRD-212ENST00000488774 SCN11AQ9UI33 1791 aa8.95□□□□□ -0.98
PTPRD-212ENST00000488774 KCNQ2O43526 872 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms