RNA–Protein interactions for RNA: ENST00000488648.5

SKIV2L-212, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 720 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-212ENST00000488648 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
SKIV2L-212ENST00000488648 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.27
SKIV2L-212ENST00000488648 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
SKIV2L-212ENST00000488648 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
SKIV2L-212ENST00000488648 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
SKIV2L-212ENST00000488648 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.7■□□□□ 0.26
SKIV2L-212ENST00000488648 NRAPQ86VF7 1730 aa16.68■□□□□ 0.26
SKIV2L-212ENST00000488648 FBLN1P23142 703 aa16.68■□□□□ 0.26
SKIV2L-212ENST00000488648 HOXC9P31274 260 aa16.68■□□□□ 0.26
SKIV2L-212ENST00000488648 MTHFSP49914 203 aa16.68■□□□□ 0.26
SKIV2L-212ENST00000488648 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
SKIV2L-212ENST00000488648 ILDR1Q86SU0 546 aaPredicted RBP16.68■□□□□ 0.26
SKIV2L-212ENST00000488648 IP6K1Q92551 441 aa16.67■□□□□ 0.26
SKIV2L-212ENST00000488648 C8orf37Q96NL8 207 aa16.67■□□□□ 0.26
SKIV2L-212ENST00000488648 INSRP06213 1382 aa16.66■□□□□ 0.26
SKIV2L-212ENST00000488648 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
SKIV2L-212ENST00000488648 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
SKIV2L-212ENST00000488648 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
SKIV2L-212ENST00000488648 COL5A2P05997 1499 aaPredicted RBP16.64■□□□□ 0.25
SKIV2L-212ENST00000488648 SLIT2O94813 1529 aa16.64■□□□□ 0.25
SKIV2L-212ENST00000488648 CSB-PGBD3P0DP91 1061 aa16.63■□□□□ 0.25
SKIV2L-212ENST00000488648 EVA1CP58658 441 aa16.63■□□□□ 0.25
SKIV2L-212ENST00000488648 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
SKIV2L-212ENST00000488648 RGPD2P0DJD1 1756 aa16.63■□□□□ 0.25
SKIV2L-212ENST00000488648 COL3A1P02461 1466 aaPredicted RBP16.62■□□□□ 0.25
SKIV2L-212ENST00000488648 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
SKIV2L-212ENST00000488648 ERBB3P21860 1342 aa16.62■□□□□ 0.25
SKIV2L-212ENST00000488648 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
SKIV2L-212ENST00000488648 HSP90AB2PQ58FF8 381 aa16.61■□□□□ 0.25
SKIV2L-212ENST00000488648 ANKRD24Q8TF21 1146 aa16.61■□□□□ 0.25
SKIV2L-212ENST00000488648 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
SKIV2L-212ENST00000488648 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
SKIV2L-212ENST00000488648 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
SKIV2L-212ENST00000488648 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
SKIV2L-212ENST00000488648 AFF2P51816 1311 aa16.6■□□□□ 0.25
SKIV2L-212ENST00000488648 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
SKIV2L-212ENST00000488648 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
SKIV2L-212ENST00000488648 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
SKIV2L-212ENST00000488648 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
SKIV2L-212ENST00000488648 USP21Q9UK80 565 aa16.59■□□□□ 0.25
SKIV2L-212ENST00000488648 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
SKIV2L-212ENST00000488648 CRB1P82279 1406 aa16.59■□□□□ 0.25
SKIV2L-212ENST00000488648 EIF4A2Q14240 407 aaKnown RBP16.58■□□□□ 0.24
SKIV2L-212ENST00000488648 UNC5CLQ8IV45 518 aa16.58■□□□□ 0.24
SKIV2L-212ENST00000488648 MIER1Q8N108 512 aa16.58■□□□□ 0.24
SKIV2L-212ENST00000488648 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
SKIV2L-212ENST00000488648 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
SKIV2L-212ENST00000488648 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
SKIV2L-212ENST00000488648 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
SKIV2L-212ENST00000488648 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
SKIV2L-212ENST00000488648 NLRP2Q9NX02 1062 aa16.57■□□□□ 0.24
SKIV2L-212ENST00000488648 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
SKIV2L-212ENST00000488648 BCL9LQ86UU0 1499 aa16.56■□□□□ 0.24
SKIV2L-212ENST00000488648 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
SKIV2L-212ENST00000488648 IL13P35225 146 aa16.54■□□□□ 0.24
SKIV2L-212ENST00000488648 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
SKIV2L-212ENST00000488648 TRPC5Q9UL62 973 aaPredicted RBP16.54■□□□□ 0.24
SKIV2L-212ENST00000488648 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
SKIV2L-212ENST00000488648 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
SKIV2L-212ENST00000488648 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
SKIV2L-212ENST00000488648 VPS72Q15906 364 aa16.53■□□□□ 0.24
SKIV2L-212ENST00000488648 CARD10Q9BWT7 1032 aa16.53■□□□□ 0.24
SKIV2L-212ENST00000488648 ATRNO75882 1429 aa16.53■□□□□ 0.24
SKIV2L-212ENST00000488648 NCAPD2Q15021 1401 aa16.52■□□□□ 0.23
SKIV2L-212ENST00000488648 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
SKIV2L-212ENST00000488648 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
SKIV2L-212ENST00000488648 NEFMP07197 916 aa16.51■□□□□ 0.23
SKIV2L-212ENST00000488648 EYA1Q99502 592 aa16.51■□□□□ 0.23
SKIV2L-212ENST00000488648 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
SKIV2L-212ENST00000488648 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
SKIV2L-212ENST00000488648 SPATA31A1Q5TZJ5 1347 aa16.5■□□□□ 0.23
SKIV2L-212ENST00000488648 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
SKIV2L-212ENST00000488648 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
SKIV2L-212ENST00000488648 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
SKIV2L-212ENST00000488648 USP35Q9P2H5 1018 aa16.5■□□□□ 0.23
SKIV2L-212ENST00000488648 GLI3P10071 1580 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 CCDC184Q52MB2 194 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 USHBP1Q8N6Y0 703 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 RAPGEF4Q8WZA2 1011 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 KDRP35968 1356 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 PLEKHG2Q9H7P9 1386 aa16.49■□□□□ 0.23
SKIV2L-212ENST00000488648 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
SKIV2L-212ENST00000488648 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
SKIV2L-212ENST00000488648 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
SKIV2L-212ENST00000488648 HMOX1P09601 288 aa16.47■□□□□ 0.23
SKIV2L-212ENST00000488648 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
SKIV2L-212ENST00000488648 LRRC37A3O60309 1634 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 A0A0G2JS52 829 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 FCHSD2O94868 740 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 IL2RBP14784 551 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 TATP17735 454 aaPredicted RBP16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 MYT1Q01538 1121 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 THSD7AQ9UPZ6 1657 aa16.46■□□□□ 0.23
SKIV2L-212ENST00000488648 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
SKIV2L-212ENST00000488648 FAM9BQ8IZU0 186 aa16.45■□□□□ 0.22
SKIV2L-212ENST00000488648 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
SKIV2L-212ENST00000488648 MEGF6O75095 1541 aa16.45■□□□□ 0.22
SKIV2L-212ENST00000488648 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms