RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
CD46-215ENST00000488596 CARD14Q9BXL6 1004 aa7.55□□□□□ -1.2
CD46-215ENST00000488596 ERFEQ4G0M1 354 aa7.54□□□□□ -1.2
CD46-215ENST00000488596 LRRN4Q8WUT4 740 aa7.54□□□□□ -1.2
CD46-215ENST00000488596 SOS2Q07890 1332 aaPredicted RBP7.53□□□□□ -1.2
CD46-215ENST00000488596 UPP2O95045 317 aa7.53□□□□□ -1.2
CD46-215ENST00000488596 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
CD46-215ENST00000488596 PPFIA3O75145 1194 aa7.52□□□□□ -1.21
CD46-215ENST00000488596 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
CD46-215ENST00000488596 PROCA1Q8NCQ7 364 aaPredicted RBP7.52□□□□□ -1.21
CD46-215ENST00000488596 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.212e-21■□□□□ 9.1
CD46-215ENST00000488596 ADAMTS8Q9UP79 889 aa7.52□□□□□ -1.21
CD46-215ENST00000488596 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
CD46-215ENST00000488596 SKIV2LQ15477 1246 aaKnown RBP7.51□□□□□ -1.21
CD46-215ENST00000488596 PDXDC2PQ6P474 469 aa7.51□□□□□ -1.21
CD46-215ENST00000488596 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
CD46-215ENST00000488596 FKBPLQ9UIM3 349 aa7.51□□□□□ -1.21
CD46-215ENST00000488596 DNMT3AQ9Y6K1 912 aaPredicted RBP7.51□□□□□ -1.21
CD46-215ENST00000488596 FOXK2Q01167 660 aa7.5□□□□□ -1.21
CD46-215ENST00000488596 CBLBQ13191 982 aa7.5□□□□□ -1.21
CD46-215ENST00000488596 NR6A1Q15406 480 aa7.5□□□□□ -1.21
CD46-215ENST00000488596 PPP1R26Q5T8A7 1209 aaPredicted RBP7.5□□□□□ -1.21
CD46-215ENST00000488596 OCSTAMPQ9BR26 566 aa7.5□□□□□ -1.21
CD46-215ENST00000488596 TSEN34Q9BSV6 310 aaKnown RBP7.5□□□□□ -1.21
CD46-215ENST00000488596 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.5□□□□□ -1.21
CD46-215ENST00000488596 FAM117AQ9C073 453 aa7.5□□□□□ -1.21
CD46-215ENST00000488596 ARHGAP9Q9BRR9 750 aa7.49□□□□□ -1.21
CD46-215ENST00000488596 KDM4CQ9H3R0 1056 aa7.49□□□□□ -1.21
CD46-215ENST00000488596 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
CD46-215ENST00000488596 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
CD46-215ENST00000488596 Q6ZVU0 165 aa7.48□□□□□ -1.21
CD46-215ENST00000488596 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
CD46-215ENST00000488596 TTLL8A6PVC2 850 aa7.47□□□□□ -1.21
CD46-215ENST00000488596 PPP2R2DQ66LE6 453 aa7.47□□□□□ -1.21
CD46-215ENST00000488596 ZBTB33Q86T24 672 aa7.47□□□□□ -1.21
CD46-215ENST00000488596 EPS8L1Q8TE68 723 aa7.47□□□□□ -1.21
CD46-215ENST00000488596 FIGNL2A6NMB9 653 aa7.46□□□□□ -1.22
CD46-215ENST00000488596 GPAT2Q6NUI2 795 aa7.46□□□□□ -1.22
CD46-215ENST00000488596 GPR161Q8N6U8 529 aaKnown RBP7.46□□□□□ -1.22
CD46-215ENST00000488596 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
CD46-215ENST00000488596 SPINT1O43278 529 aa7.45□□□□□ -1.22
CD46-215ENST00000488596 AP1G2O75843 785 aa7.45□□□□□ -1.22
CD46-215ENST00000488596 KRT76Q01546 638 aa7.45□□□□□ -1.22
CD46-215ENST00000488596 PTSQ03393 145 aa7.45□□□□□ -1.22
CD46-215ENST00000488596 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.45□□□□□ -1.221e-7■□□□□ 8.6
CD46-215ENST00000488596 INTS6LQ5JSJ4 861 aaKnown RBP7.45□□□□□ -1.22
CD46-215ENST00000488596 KANK3Q6NY19 840 aa7.45□□□□□ -1.22
CD46-215ENST00000488596 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
CD46-215ENST00000488596 ATP1B4Q9UN42 357 aaPredicted RBP7.45□□□□□ -1.22
CD46-215ENST00000488596 ADAM32Q8TC27 787 aa7.44□□□□□ -1.22
CD46-215ENST00000488596 DDRGK1Q96HY6 314 aa7.44□□□□□ -1.22
CD46-215ENST00000488596 AGBL1Q96MI9 1066 aa7.44□□□□□ -1.22
CD46-215ENST00000488596 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
CD46-215ENST00000488596 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
CD46-215ENST00000488596 HMX1Q9NP08 348 aaPredicted RBP7.44□□□□□ -1.22
CD46-215ENST00000488596 ZC3H4Q9UPT8 1303 aaKnown RBP7.44□□□□□ -1.22
CD46-215ENST00000488596 PTK2Q05397 1052 aa7.43□□□□□ -1.22
CD46-215ENST00000488596 CDV3Q9UKY7 258 aaKnown RBP7.43□□□□□ -1.22
CD46-215ENST00000488596 DHX9Q08211 1270 aaKnown RBP7.42□□□□□ -1.22
CD46-215ENST00000488596 XP32Q5T750 250 aa7.42□□□□□ -1.22
CD46-215ENST00000488596 ZNF385CQ66K41 422 aaPredicted RBP7.42□□□□□ -1.22
CD46-215ENST00000488596 SVOPQ8N4V2 548 aa7.42□□□□□ -1.22
CD46-215ENST00000488596 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
CD46-215ENST00000488596 IRS1P35568 1242 aa7.41□□□□□ -1.22
CD46-215ENST00000488596 CTSOP43234 321 aaPredicted RBP7.41□□□□□ -1.22
CD46-215ENST00000488596 RELBQ01201 579 aa7.41□□□□□ -1.22
CD46-215ENST00000488596 CCDC155Q8N6L0 562 aa7.41□□□□□ -1.22
CD46-215ENST00000488596 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
CD46-215ENST00000488596 GPSM3Q9Y4H4 160 aa7.41□□□□□ -1.22
CD46-215ENST00000488596 SLC35F4A4IF30 521 aa7.4□□□□□ -1.22
CD46-215ENST00000488596 SLURP2P0DP57 97 aa7.4□□□□□ -1.22
CD46-215ENST00000488596 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
CD46-215ENST00000488596 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
CD46-215ENST00000488596 ZNF395Q9H8N7 513 aaPredicted RBP7.4□□□□□ -1.22
CD46-215ENST00000488596 ARHGEF15O94989 841 aa7.39□□□□□ -1.23
CD46-215ENST00000488596 USP17L8P0C7I0 530 aa7.39□□□□□ -1.23
CD46-215ENST00000488596 ADD1P35611 737 aaKnown RBP7.39□□□□□ -1.23
CD46-215ENST00000488596 RAB15P59190 212 aa7.39□□□□□ -1.23
CD46-215ENST00000488596 SCARF2Q96GP6 870 aaPredicted RBP7.39□□□□□ -1.23
CD46-215ENST00000488596 RFC5P40937 340 aa7.38□□□□□ -1.23
CD46-215ENST00000488596 MARSP56192 900 aaKnown RBP7.38□□□□□ -1.23
CD46-215ENST00000488596 ZNF784Q8NCA9 323 aaPredicted RBP7.38□□□□□ -1.23
CD46-215ENST00000488596 ERVH48-1M5A8F1 160 aa7.37□□□□□ -1.23
CD46-215ENST00000488596 LILRA1O75019 489 aa7.37□□□□□ -1.23
CD46-215ENST00000488596 NBPF20Q3BBV1 942 aa7.37□□□□□ -1.23
CD46-215ENST00000488596 RNFT1Q5M7Z0 435 aa7.37□□□□□ -1.23
CD46-215ENST00000488596 KDF1Q8NAX2 398 aaPredicted RBP7.37□□□□□ -1.23
CD46-215ENST00000488596 POLMQ9NP87 494 aaPredicted RBP7.37□□□□□ -1.23
CD46-215ENST00000488596 ITGA6P23229 1130 aa7.36□□□□□ -1.23
CD46-215ENST00000488596 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
CD46-215ENST00000488596 VWA5B2Q8N398 1253 aa7.36□□□□□ -1.23
CD46-215ENST00000488596 RNF217Q8TC41 542 aa7.36□□□□□ -1.23
CD46-215ENST00000488596 TRIM34Q9BYJ4 488 aa7.36□□□□□ -1.23
CD46-215ENST00000488596 SENP3-EIF4A1A0A087X0R7 540 aa7.35□□□□□ -1.23
CD46-215ENST00000488596 ESPNB1AK53 854 aa7.35□□□□□ -1.23
CD46-215ENST00000488596 ADAM23O75077 832 aa7.35□□□□□ -1.23
CD46-215ENST00000488596 ADH1AP07327 375 aa7.35□□□□□ -1.23
CD46-215ENST00000488596 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
CD46-215ENST00000488596 CDC14CA4D256 554 aa7.33□□□□□ -1.24
CD46-215ENST00000488596 PTGIRP43119 386 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms