RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
TTC3-221ENST00000488522 CASZ1Q86V15 1759 aa17.7■□□□□ 0.42
TTC3-221ENST00000488522 USP54Q70EL1 1684 aa17.7■□□□□ 0.42
TTC3-221ENST00000488522 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
TTC3-221ENST00000488522 NFAT5O94916 1531 aa17.69■□□□□ 0.42
TTC3-221ENST00000488522 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
TTC3-221ENST00000488522 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
TTC3-221ENST00000488522 MON2Q7Z3U7 1717 aa17.67■□□□□ 0.42
TTC3-221ENST00000488522 DDB1Q16531 1140 aa17.67■□□□□ 0.42
TTC3-221ENST00000488522 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
TTC3-221ENST00000488522 L3MBTL2Q969R5 705 aa17.67■□□□□ 0.42
TTC3-221ENST00000488522 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
TTC3-221ENST00000488522 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
TTC3-221ENST00000488522 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
TTC3-221ENST00000488522 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
TTC3-221ENST00000488522 KCNH5Q8NCM2 988 aa17.66■□□□□ 0.42
TTC3-221ENST00000488522 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
TTC3-221ENST00000488522 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
TTC3-221ENST00000488522 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
TTC3-221ENST00000488522 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
TTC3-221ENST00000488522 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
TTC3-221ENST00000488522 KCNQ2O43526 872 aa17.64■□□□□ 0.41
TTC3-221ENST00000488522 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
TTC3-221ENST00000488522 MARCH10Q8NA82 808 aaPredicted RBP17.63■□□□□ 0.41
TTC3-221ENST00000488522 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
TTC3-221ENST00000488522 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
TTC3-221ENST00000488522 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
TTC3-221ENST00000488522 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
TTC3-221ENST00000488522 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
TTC3-221ENST00000488522 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
TTC3-221ENST00000488522 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
TTC3-221ENST00000488522 PROM2Q8N271 834 aa17.6■□□□□ 0.41
TTC3-221ENST00000488522 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
TTC3-221ENST00000488522 CD163L1Q9NR16 1453 aa17.59■□□□□ 0.41
TTC3-221ENST00000488522 KTN1Q86UP2 1357 aaKnown RBP17.58■□□□□ 0.4
TTC3-221ENST00000488522 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.4
TTC3-221ENST00000488522 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
TTC3-221ENST00000488522 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
TTC3-221ENST00000488522 MYOM1P52179 1685 aa17.56■□□□□ 0.4
TTC3-221ENST00000488522 ERBB3P21860 1342 aa17.55■□□□□ 0.4
TTC3-221ENST00000488522 YY1P25490 414 aa17.55■□□□□ 0.4
TTC3-221ENST00000488522 LTN1O94822 1766 aa17.55■□□□□ 0.4
TTC3-221ENST00000488522 EXOC5O00471 708 aa17.54■□□□□ 0.4
TTC3-221ENST00000488522 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
TTC3-221ENST00000488522 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
TTC3-221ENST00000488522 PTGER2P43116 358 aa17.53■□□□□ 0.4
TTC3-221ENST00000488522 TXNRD1Q16881 649 aa17.53■□□□□ 0.4
TTC3-221ENST00000488522 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
TTC3-221ENST00000488522 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
TTC3-221ENST00000488522 EDC4Q6P2E9 1401 aaKnown RBP17.52■□□□□ 0.4
TTC3-221ENST00000488522 SLC15A2Q16348 729 aa17.51■□□□□ 0.39
TTC3-221ENST00000488522 FAM208AQ9UK61 1670 aaKnown RBP17.51■□□□□ 0.39
TTC3-221ENST00000488522 BTAF1O14981 1849 aa17.5■□□□□ 0.39
TTC3-221ENST00000488522 SOX12O15370 315 aa17.5■□□□□ 0.39
TTC3-221ENST00000488522 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
TTC3-221ENST00000488522 STK32BQ9NY57 414 aa17.5■□□□□ 0.39
TTC3-221ENST00000488522 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
TTC3-221ENST00000488522 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
TTC3-221ENST00000488522 SGIP1Q9BQI5 828 aa17.49■□□□□ 0.39
TTC3-221ENST00000488522 QSER1Q2KHR3 1735 aa17.48■□□□□ 0.39
TTC3-221ENST00000488522 NME9Q86XW9 330 aa17.48■□□□□ 0.39
TTC3-221ENST00000488522 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
TTC3-221ENST00000488522 IL2RBP14784 551 aa17.47■□□□□ 0.39
TTC3-221ENST00000488522 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
TTC3-221ENST00000488522 MTFR1LQ9H019 292 aa17.47■□□□□ 0.39
TTC3-221ENST00000488522 MAP3K5Q99683 1374 aa17.47■□□□□ 0.39
TTC3-221ENST00000488522 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
TTC3-221ENST00000488522 UTRNP46939 3433 aa17.46■□□□□ 0.39
TTC3-221ENST00000488522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
TTC3-221ENST00000488522 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
TTC3-221ENST00000488522 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
TTC3-221ENST00000488522 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
TTC3-221ENST00000488522 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
TTC3-221ENST00000488522 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
TTC3-221ENST00000488522 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
TTC3-221ENST00000488522 SLC12A5Q9H2X9 1139 aa17.43■□□□□ 0.38
TTC3-221ENST00000488522 SYT17Q9BSW7 474 aa17.42■□□□□ 0.38
TTC3-221ENST00000488522 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
TTC3-221ENST00000488522 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
TTC3-221ENST00000488522 CHD4Q14839 1912 aa17.41■□□□□ 0.38
TTC3-221ENST00000488522 IP6K1Q92551 441 aa17.41■□□□□ 0.38
TTC3-221ENST00000488522 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
TTC3-221ENST00000488522 FHDC1Q9C0D6 1143 aaPredicted RBP17.41■□□□□ 0.38
TTC3-221ENST00000488522 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
TTC3-221ENST00000488522 LY75O60449 1722 aa17.39■□□□□ 0.37
TTC3-221ENST00000488522 TMC1Q8TDI8 760 aa17.39■□□□□ 0.37
TTC3-221ENST00000488522 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
TTC3-221ENST00000488522 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
TTC3-221ENST00000488522 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
TTC3-221ENST00000488522 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
TTC3-221ENST00000488522 TESK2Q96S53 571 aa17.38■□□□□ 0.37
TTC3-221ENST00000488522 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
TTC3-221ENST00000488522 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
TTC3-221ENST00000488522 ARXQ96QS3 562 aa17.37■□□□□ 0.37
TTC3-221ENST00000488522 DOT1LQ8TEK3 1739 aa17.37■□□□□ 0.37
TTC3-221ENST00000488522 SLC16A10Q8TF71 515 aa17.36■□□□□ 0.37
TTC3-221ENST00000488522 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
TTC3-221ENST00000488522 NSD2O96028 1365 aa17.36■□□□□ 0.37
TTC3-221ENST00000488522 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
TTC3-221ENST00000488522 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms