RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 CCDC9Q9Y3X0 531 aaKnown RBP22.16■■□□□ 1.14
ERGIC3-216ENST00000488384 THSD7AQ9UPZ6 1657 aa22.15■■□□□ 1.14
ERGIC3-216ENST00000488384 COG3Q96JB2 828 aa22.15■■□□□ 1.14
ERGIC3-216ENST00000488384 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
ERGIC3-216ENST00000488384 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
ERGIC3-216ENST00000488384 AXIN2Q9Y2T1 843 aa22.12■■□□□ 1.13
ERGIC3-216ENST00000488384 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
ERGIC3-216ENST00000488384 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
ERGIC3-216ENST00000488384 LARP1Q6PKG0 1096 aaKnown RBP22.11■■□□□ 1.13
ERGIC3-216ENST00000488384 PANK3Q9H999 370 aa22.11■■□□□ 1.13
ERGIC3-216ENST00000488384 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
ERGIC3-216ENST00000488384 EVA1CP58658 441 aa22.1■■□□□ 1.13
ERGIC3-216ENST00000488384 CGNL1Q0VF96 1302 aa22.09■■□□□ 1.13
ERGIC3-216ENST00000488384 WASHC2AQ641Q2 1341 aa22.09■■□□□ 1.13
ERGIC3-216ENST00000488384 CRB1P82279 1406 aa22.09■■□□□ 1.13
ERGIC3-216ENST00000488384 ONECUT3O60422 494 aaPredicted RBP22.09■■□□□ 1.13
ERGIC3-216ENST00000488384 FAM98CQ17RN3 349 aaKnown RBP22.08■■□□□ 1.13
ERGIC3-216ENST00000488384 FBLN1P23142 703 aa22.07■■□□□ 1.12
ERGIC3-216ENST00000488384 SEPT12Q8IYM1 358 aa22.07■■□□□ 1.12
ERGIC3-216ENST00000488384 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
ERGIC3-216ENST00000488384 WDR17Q8IZU2 1322 aa22.06■■□□□ 1.12
ERGIC3-216ENST00000488384 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
ERGIC3-216ENST00000488384 WNK3Q9BYP7 1800 aa22.05■■□□□ 1.12
ERGIC3-216ENST00000488384 BLMP54132 1417 aaPredicted RBP22.05■■□□□ 1.12
ERGIC3-216ENST00000488384 PEAK1Q9H792 1746 aa22.04■■□□□ 1.12
ERGIC3-216ENST00000488384 ERBB3P21860 1342 aa22.04■■□□□ 1.12
ERGIC3-216ENST00000488384 TNS1Q9HBL0 1735 aaKnown RBP22.03■■□□□ 1.12
ERGIC3-216ENST00000488384 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
ERGIC3-216ENST00000488384 NSD2O96028 1365 aa22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 A0A0G2JS52 829 aa22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 MYT1Q01538 1121 aa22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 RRS1Q15050 365 aaKnown RBP22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 BARGINQ6ZT62 677 aa22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 TCP11L2Q8N4U5 519 aa22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 IP6K1Q92551 441 aa22.02■■□□□ 1.12
ERGIC3-216ENST00000488384 TOM1L2Q6ZVM7 507 aa22.01■■□□□ 1.11
ERGIC3-216ENST00000488384 PARP4Q9UKK3 1724 aaKnown RBP22■■□□□ 1.11
ERGIC3-216ENST00000488384 HOXC9P31274 260 aa22■■□□□ 1.11
ERGIC3-216ENST00000488384 THRAP3Q9Y2W1 955 aaKnown RBP22■■□□□ 1.11
ERGIC3-216ENST00000488384 FAM208AQ9UK61 1670 aaKnown RBP22■■□□□ 1.11
ERGIC3-216ENST00000488384 RGPD1P0DJD0 1748 aa22■■□□□ 1.11
ERGIC3-216ENST00000488384 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
ERGIC3-216ENST00000488384 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
ERGIC3-216ENST00000488384 AMPHP49418 695 aa21.98■■□□□ 1.11
ERGIC3-216ENST00000488384 ANKRD24Q8TF21 1146 aa21.98■■□□□ 1.11
ERGIC3-216ENST00000488384 CARD10Q9BWT7 1032 aa21.98■■□□□ 1.11
ERGIC3-216ENST00000488384 KNSTRNQ9Y448 316 aa21.98■■□□□ 1.11
ERGIC3-216ENST00000488384 KRT27Q7Z3Y8 459 aa21.97■■□□□ 1.11
ERGIC3-216ENST00000488384 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
ERGIC3-216ENST00000488384 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
ERGIC3-216ENST00000488384 DISP2A7MBM2 1401 aa21.97■■□□□ 1.11
ERGIC3-216ENST00000488384 AMER1Q5JTC6 1135 aaPredicted RBP21.96■■□□□ 1.11
ERGIC3-216ENST00000488384 FLT4P35916 1363 aa21.96■■□□□ 1.11
ERGIC3-216ENST00000488384 PER1O15534 1290 aaPredicted RBP21.95■■□□□ 1.1
ERGIC3-216ENST00000488384 EMILIN1Q9Y6C2 1016 aa21.95■■□□□ 1.1
ERGIC3-216ENST00000488384 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
ERGIC3-216ENST00000488384 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
ERGIC3-216ENST00000488384 INSRP06213 1382 aa21.93■■□□□ 1.1
ERGIC3-216ENST00000488384 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
ERGIC3-216ENST00000488384 DEFB132Q7Z7B7 95 aa21.93■■□□□ 1.1
ERGIC3-216ENST00000488384 LTV1Q96GA3 475 aaPredicted RBP21.93■■□□□ 1.1
ERGIC3-216ENST00000488384 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
ERGIC3-216ENST00000488384 NLRP2Q9NX02 1062 aa21.92■■□□□ 1.1
ERGIC3-216ENST00000488384 TNNT2P45379 298 aaPredicted RBP21.91■■□□□ 1.1
ERGIC3-216ENST00000488384 HSP90AB2PQ58FF8 381 aa21.91■■□□□ 1.1
ERGIC3-216ENST00000488384 POLKQ9UBT6 870 aa21.9■■□□□ 1.1
ERGIC3-216ENST00000488384 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
ERGIC3-216ENST00000488384 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
ERGIC3-216ENST00000488384 NPC1L1Q9UHC9 1359 aa21.88■■□□□ 1.09
ERGIC3-216ENST00000488384 FAM182BQ5T319 152 aa21.88■■□□□ 1.09
ERGIC3-216ENST00000488384 TNS2Q63HR2 1409 aa21.88■■□□□ 1.09
ERGIC3-216ENST00000488384 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
ERGIC3-216ENST00000488384 SRCAPQ6ZRS2 3230 aa21.85■■□□□ 1.09
ERGIC3-216ENST00000488384 PDE3BQ13370 1112 aa21.85■■□□□ 1.09
ERGIC3-216ENST00000488384 DDB1Q16531 1140 aa21.85■■□□□ 1.09
ERGIC3-216ENST00000488384 RREB1Q92766 1687 aa21.85■■□□□ 1.09
ERGIC3-216ENST00000488384 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
ERGIC3-216ENST00000488384 NBPF6Q5VWK0 638 aa21.84■■□□□ 1.09
ERGIC3-216ENST00000488384 NBPF4Q96M43 638 aa21.84■■□□□ 1.09
ERGIC3-216ENST00000488384 IL2RBP14784 551 aa21.83■■□□□ 1.09
ERGIC3-216ENST00000488384 MEGF6O75095 1541 aa21.83■■□□□ 1.09
ERGIC3-216ENST00000488384 OVOS2A0A0G2JMS6 1433 aa21.82■■□□□ 1.08
ERGIC3-216ENST00000488384 NCAPD2Q15021 1401 aa21.82■■□□□ 1.08
ERGIC3-216ENST00000488384 SBF2Q86WG5 1849 aa21.82■■□□□ 1.08
ERGIC3-216ENST00000488384 LRP5O75197 1615 aa21.81■■□□□ 1.08
ERGIC3-216ENST00000488384 USHBP1Q8N6Y0 703 aa21.81■■□□□ 1.08
ERGIC3-216ENST00000488384 FAM196AQ6ZSG2 479 aa21.8■■□□□ 1.08
ERGIC3-216ENST00000488384 NUP188Q5SRE5 1749 aa21.8■■□□□ 1.08
ERGIC3-216ENST00000488384 SHANK3Q9BYB0 1731 aa21.8■■□□□ 1.08
ERGIC3-216ENST00000488384 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
ERGIC3-216ENST00000488384 MARCH10Q8NA82 808 aaPredicted RBP21.78■■□□□ 1.08
ERGIC3-216ENST00000488384 EXOC5O00471 708 aa21.77■■□□□ 1.08
ERGIC3-216ENST00000488384 BCL9O00512 1426 aa21.77■■□□□ 1.08
ERGIC3-216ENST00000488384 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
ERGIC3-216ENST00000488384 CNGB1Q14028 1251 aaPredicted RBP21.76■■□□□ 1.07
ERGIC3-216ENST00000488384 BAG6P46379 1132 aa21.74■■□□□ 1.07
ERGIC3-216ENST00000488384 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
ERGIC3-216ENST00000488384 EYA1Q99502 592 aa21.74■■□□□ 1.07
ERGIC3-216ENST00000488384 PKD1L3Q7Z443 1732 aa21.73■■□□□ 1.07
ERGIC3-216ENST00000488384 TRIM37O94972 964 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms