RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 TESK2Q96S53 571 aa15.95■□□□□ 0.14
PCYT1A-215ENST00000488235 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
PCYT1A-215ENST00000488235 TOM1L2Q6ZVM7 507 aa15.94■□□□□ 0.14
PCYT1A-215ENST00000488235 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
PCYT1A-215ENST00000488235 LRRC37A3O60309 1634 aa15.94■□□□□ 0.14
PCYT1A-215ENST00000488235 RGPD5Q99666 1765 aa15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 A0A1W2PP64 1363 aa15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 USP31Q70CQ4 1352 aa15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 APBA3O96018 575 aa15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 R3HDM1Q15032 1099 aaKnown RBP15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
PCYT1A-215ENST00000488235 PEAK1Q9H792 1746 aa15.92■□□□□ 0.14
PCYT1A-215ENST00000488235 PTF1AQ7RTS3 328 aa15.92■□□□□ 0.14
PCYT1A-215ENST00000488235 USP54Q70EL1 1684 aa15.89■□□□□ 0.13
PCYT1A-215ENST00000488235 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
PCYT1A-215ENST00000488235 DDB1Q16531 1140 aa15.89■□□□□ 0.13
PCYT1A-215ENST00000488235 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
PCYT1A-215ENST00000488235 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
PCYT1A-215ENST00000488235 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
PCYT1A-215ENST00000488235 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 OVOS2A0A0J9YW53 1432 aa15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 OVOS2Q6IE36 1432 aa15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 LRP5O75197 1615 aa15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 CSB-PGBD3P0DP91 1061 aa15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 RREB1Q92766 1687 aa15.88■□□□□ 0.13
PCYT1A-215ENST00000488235 NUP188Q5SRE5 1749 aa15.86■□□□□ 0.13
PCYT1A-215ENST00000488235 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
PCYT1A-215ENST00000488235 ERBB3P21860 1342 aa15.86■□□□□ 0.13
PCYT1A-215ENST00000488235 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
PCYT1A-215ENST00000488235 ABCC6O95255 1503 aa15.85■□□□□ 0.13
PCYT1A-215ENST00000488235 FBLN1P23142 703 aa15.85■□□□□ 0.13
PCYT1A-215ENST00000488235 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
PCYT1A-215ENST00000488235 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
PCYT1A-215ENST00000488235 LTN1O94822 1766 aa15.84■□□□□ 0.13
PCYT1A-215ENST00000488235 USP47Q96K76 1375 aa15.84■□□□□ 0.13
PCYT1A-215ENST00000488235 PROM2Q8N271 834 aa15.82■□□□□ 0.12
PCYT1A-215ENST00000488235 CCDC7Q96M83 1385 aa15.82■□□□□ 0.12
PCYT1A-215ENST00000488235 TNS2Q63HR2 1409 aa15.82■□□□□ 0.12
PCYT1A-215ENST00000488235 UTRNP46939 3433 aa15.81■□□□□ 0.12
PCYT1A-215ENST00000488235 BCL9O00512 1426 aa15.81■□□□□ 0.12
PCYT1A-215ENST00000488235 ANKRD24Q8TF21 1146 aa15.81■□□□□ 0.12
PCYT1A-215ENST00000488235 CDCA7Q9BWT1 371 aaPredicted RBP15.81■□□□□ 0.12
PCYT1A-215ENST00000488235 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
PCYT1A-215ENST00000488235 NLRP2Q9NX02 1062 aa15.81■□□□□ 0.12
PCYT1A-215ENST00000488235 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
PCYT1A-215ENST00000488235 KCNQ2O43526 872 aa15.8■□□□□ 0.12
PCYT1A-215ENST00000488235 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
PCYT1A-215ENST00000488235 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
PCYT1A-215ENST00000488235 EXOC5O00471 708 aa15.79■□□□□ 0.12
PCYT1A-215ENST00000488235 MAP3K19Q56UN5 1328 aa15.78■□□□□ 0.12
PCYT1A-215ENST00000488235 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
PCYT1A-215ENST00000488235 PLSCR1O15162 318 aa15.78■□□□□ 0.12
PCYT1A-215ENST00000488235 IP6K1Q92551 441 aa15.78■□□□□ 0.12
PCYT1A-215ENST00000488235 TMF1P82094 1093 aa15.77■□□□□ 0.12
PCYT1A-215ENST00000488235 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
PCYT1A-215ENST00000488235 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
PCYT1A-215ENST00000488235 PDGFDQ9GZP0 370 aaPredicted RBP15.77■□□□□ 0.12
PCYT1A-215ENST00000488235 FYB1O15117 783 aa15.76■□□□□ 0.11
PCYT1A-215ENST00000488235 IL2RBP14784 551 aa15.76■□□□□ 0.11
PCYT1A-215ENST00000488235 ACSBG1Q96GR2 724 aa15.76■□□□□ 0.11
PCYT1A-215ENST00000488235 COG3Q96JB2 828 aa15.76■□□□□ 0.11
PCYT1A-215ENST00000488235 RGPD3A6NKT7 1758 aaPredicted RBP15.76■□□□□ 0.11
PCYT1A-215ENST00000488235 RGPD4Q7Z3J3 1758 aa15.76■□□□□ 0.11
PCYT1A-215ENST00000488235 HOXC9P31274 260 aa15.75■□□□□ 0.11
PCYT1A-215ENST00000488235 RRS1Q15050 365 aaKnown RBP15.75■□□□□ 0.11
PCYT1A-215ENST00000488235 NBPF14Q5TI25 921 aa15.75■□□□□ 0.11
PCYT1A-215ENST00000488235 GGNBP2Q9H3C7 697 aa15.75■□□□□ 0.11
PCYT1A-215ENST00000488235 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
PCYT1A-215ENST00000488235 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
PCYT1A-215ENST00000488235 GOLGB1Q14789 3259 aaKnown RBP15.73■□□□□ 0.11
PCYT1A-215ENST00000488235 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
PCYT1A-215ENST00000488235 SLC24A1O60721 1099 aa15.72■□□□□ 0.11
PCYT1A-215ENST00000488235 MYOM1P52179 1685 aa15.72■□□□□ 0.11
PCYT1A-215ENST00000488235 FAM208AQ9UK61 1670 aaKnown RBP15.72■□□□□ 0.11
PCYT1A-215ENST00000488235 AMPHP49418 695 aa15.71■□□□□ 0.11
PCYT1A-215ENST00000488235 RGPD2P0DJD1 1756 aa15.71■□□□□ 0.11
PCYT1A-215ENST00000488235 MEGF6O75095 1541 aa15.7■□□□□ 0.1
PCYT1A-215ENST00000488235 CASZ1Q86V15 1759 aa15.7■□□□□ 0.1
PCYT1A-215ENST00000488235 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
PCYT1A-215ENST00000488235 USHBP1Q8N6Y0 703 aa15.69■□□□□ 0.1
PCYT1A-215ENST00000488235 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
PCYT1A-215ENST00000488235 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
PCYT1A-215ENST00000488235 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
PCYT1A-215ENST00000488235 NSD3Q9BZ95 1437 aa15.68■□□□□ 0.1
PCYT1A-215ENST00000488235 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
PCYT1A-215ENST00000488235 RTL1A6NKG5 1358 aa15.67■□□□□ 0.1
PCYT1A-215ENST00000488235 BTAF1O14981 1849 aa15.67■□□□□ 0.1
PCYT1A-215ENST00000488235 HSP90AB2PQ58FF8 381 aa15.67■□□□□ 0.1
PCYT1A-215ENST00000488235 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
PCYT1A-215ENST00000488235 SHANK3Q9BYB0 1731 aa15.67■□□□□ 0.1
PCYT1A-215ENST00000488235 ZBTB7AO95365 584 aa15.66■□□□□ 0.1
PCYT1A-215ENST00000488235 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
PCYT1A-215ENST00000488235 KIF20BQ96Q89 1820 aa15.66■□□□□ 0.1
PCYT1A-215ENST00000488235 PAPPAQ13219 1627 aa15.65■□□□□ 0.1
PCYT1A-215ENST00000488235 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
PCYT1A-215ENST00000488235 CDCA8Q53HL2 280 aa15.65■□□□□ 0.1
PCYT1A-215ENST00000488235 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
PCYT1A-215ENST00000488235 NSD2O96028 1365 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms