RNA–Protein interactions for RNA: ENST00000488121.1

COL1A2-209, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-209ENST00000488121 CHRNA2Q15822 529 aa15.34■□□□□ 0.05
COL1A2-209ENST00000488121 CPDO75976 1380 aa15.34■□□□□ 0.05
COL1A2-209ENST00000488121 KIF24Q5T7B8 1368 aa15.34■□□□□ 0.05
COL1A2-209ENST00000488121 PHRF1Q9P1Y6 1649 aaKnown RBP15.33■□□□□ 0.04
COL1A2-209ENST00000488121 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
COL1A2-209ENST00000488121 FLT4P35916 1363 aa15.33■□□□□ 0.04
COL1A2-209ENST00000488121 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
COL1A2-209ENST00000488121 LTV1Q96GA3 475 aaPredicted RBP15.32■□□□□ 0.04
COL1A2-209ENST00000488121 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
COL1A2-209ENST00000488121 INSRP06213 1382 aa15.32■□□□□ 0.04
COL1A2-209ENST00000488121 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
COL1A2-209ENST00000488121 EVA1CP58658 441 aa15.31■□□□□ 0.04
COL1A2-209ENST00000488121 SMG6Q86US8 1419 aaKnown RBP15.31■□□□□ 0.04
COL1A2-209ENST00000488121 LTN1O94822 1766 aa15.31■□□□□ 0.04
COL1A2-209ENST00000488121 RTL1A6NKG5 1358 aa15.3■□□□□ 0.04
COL1A2-209ENST00000488121 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL1A2-209ENST00000488121 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
COL1A2-209ENST00000488121 CDK12Q9NYV4 1490 aaPredicted RBP15.29■□□□□ 0.04
COL1A2-209ENST00000488121 U2SURPO15042 1029 aaKnown RBP15.29■□□□□ 0.04
COL1A2-209ENST00000488121 IL13P35225 146 aa15.29■□□□□ 0.04
COL1A2-209ENST00000488121 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
COL1A2-209ENST00000488121 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
COL1A2-209ENST00000488121 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
COL1A2-209ENST00000488121 ANKRD24Q8TF21 1146 aa15.29■□□□□ 0.04
COL1A2-209ENST00000488121 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
COL1A2-209ENST00000488121 CSB-PGBD3P0DP91 1061 aa15.28■□□□□ 0.04
COL1A2-209ENST00000488121 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
COL1A2-209ENST00000488121 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
COL1A2-209ENST00000488121 PEAK1Q9H792 1746 aa15.28■□□□□ 0.04
COL1A2-209ENST00000488121 BLMP54132 1417 aaPredicted RBP15.27■□□□□ 0.04
COL1A2-209ENST00000488121 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
COL1A2-209ENST00000488121 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL1A2-209ENST00000488121 C8orf37Q96NL8 207 aa15.27■□□□□ 0.04
COL1A2-209ENST00000488121 STRN4Q9NRL3 753 aa15.26■□□□□ 0.03
COL1A2-209ENST00000488121 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
COL1A2-209ENST00000488121 EYA1Q99502 592 aa15.25■□□□□ 0.03
COL1A2-209ENST00000488121 COL18A1P39060 1754 aa15.25■□□□□ 0.03
COL1A2-209ENST00000488121 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
COL1A2-209ENST00000488121 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
COL1A2-209ENST00000488121 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
COL1A2-209ENST00000488121 RGPD5Q99666 1765 aa15.24■□□□□ 0.03
COL1A2-209ENST00000488121 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
COL1A2-209ENST00000488121 COL3A1P02461 1466 aaPredicted RBP15.23■□□□□ 0.03
COL1A2-209ENST00000488121 NBPF6Q5VWK0 638 aa15.23■□□□□ 0.03
COL1A2-209ENST00000488121 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
COL1A2-209ENST00000488121 NBPF4Q96M43 638 aa15.23■□□□□ 0.03
COL1A2-209ENST00000488121 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
COL1A2-209ENST00000488121 COL14A1Q05707 1796 aaKnown RBP15.23■□□□□ 0.03
COL1A2-209ENST00000488121 ABCC6O95255 1503 aa15.22■□□□□ 0.03
COL1A2-209ENST00000488121 ERBB3P21860 1342 aa15.22■□□□□ 0.03
COL1A2-209ENST00000488121 FCHSD2O94868 740 aa15.22■□□□□ 0.03
COL1A2-209ENST00000488121 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
COL1A2-209ENST00000488121 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
COL1A2-209ENST00000488121 LRP6O75581 1613 aa15.21■□□□□ 0.03
COL1A2-209ENST00000488121 WDR17Q8IZU2 1322 aa15.21■□□□□ 0.03
COL1A2-209ENST00000488121 HMOX1P09601 288 aa15.21■□□□□ 0.03
COL1A2-209ENST00000488121 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
COL1A2-209ENST00000488121 ILDR1Q86SU0 546 aaPredicted RBP15.2■□□□□ 0.02
COL1A2-209ENST00000488121 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
COL1A2-209ENST00000488121 USP21Q9UK80 565 aa15.2■□□□□ 0.02
COL1A2-209ENST00000488121 LMO7Q8WWI1 1683 aa15.19■□□□□ 0.02
COL1A2-209ENST00000488121 NEFMP07197 916 aa15.19■□□□□ 0.02
COL1A2-209ENST00000488121 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
COL1A2-209ENST00000488121 CARD10Q9BWT7 1032 aa15.19■□□□□ 0.02
COL1A2-209ENST00000488121 COL5A2P05997 1499 aaPredicted RBP15.19■□□□□ 0.02
COL1A2-209ENST00000488121 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
COL1A2-209ENST00000488121 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
COL1A2-209ENST00000488121 AEBP1Q8IUX7 1158 aa15.18■□□□□ 0.02
COL1A2-209ENST00000488121 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
COL1A2-209ENST00000488121 AFF2P51816 1311 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 SLIT2O94813 1529 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 PRKAR2BP31323 418 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
COL1A2-209ENST00000488121 VPS72Q15906 364 aa15.15■□□□□ 0.02
COL1A2-209ENST00000488121 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
COL1A2-209ENST00000488121 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
COL1A2-209ENST00000488121 CRB1P82279 1406 aa15.15■□□□□ 0.02
COL1A2-209ENST00000488121 PLCH1Q4KWH8 1693 aa15.15■□□□□ 0.02
COL1A2-209ENST00000488121 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
COL1A2-209ENST00000488121 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
COL1A2-209ENST00000488121 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
COL1A2-209ENST00000488121 RGPD2P0DJD1 1756 aa15.14■□□□□ 0.01
COL1A2-209ENST00000488121 TATP17735 454 aaPredicted RBP15.14■□□□□ 0.01
COL1A2-209ENST00000488121 QTRT2Q9H974 415 aaKnown RBP15.14■□□□□ 0.01
COL1A2-209ENST00000488121 KDRP35968 1356 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 RGPD1P0DJD0 1748 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 TRPC5Q9UL62 973 aaPredicted RBP15.13■□□□□ 0.01
COL1A2-209ENST00000488121 THRAP3Q9Y2W1 955 aaKnown RBP15.13■□□□□ 0.01
COL1A2-209ENST00000488121 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
COL1A2-209ENST00000488121 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
COL1A2-209ENST00000488121 APAF1O14727 1248 aa15.12■□□□□ 0.01
COL1A2-209ENST00000488121 IL2RBP14784 551 aa15.12■□□□□ 0.01
COL1A2-209ENST00000488121 PLEKHO1Q53GL0 409 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms