RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CCDC116Q8IYX3 515 aa9.68□□□□□ -0.86
CCDC66-221ENST00000487739 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
CCDC66-221ENST00000487739 HMX1Q9NP08 348 aaPredicted RBP9.68□□□□□ -0.86
CCDC66-221ENST00000487739 TPRNQ4KMQ1 711 aa9.67□□□□□ -0.86
CCDC66-221ENST00000487739 EPS8L1Q8TE68 723 aa9.67□□□□□ -0.86
CCDC66-221ENST00000487739 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
CCDC66-221ENST00000487739 UPP2O95045 317 aa9.65□□□□□ -0.86
CCDC66-221ENST00000487739 MEIOBQ8N635 442 aa9.65□□□□□ -0.86
CCDC66-221ENST00000487739 ADAM32Q8TC27 787 aa9.64□□□□□ -0.87
CCDC66-221ENST00000487739 KCTD15Q96SI1 283 aaPredicted RBP9.64□□□□□ -0.87
CCDC66-221ENST00000487739 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
CCDC66-221ENST00000487739 C6orf118Q5T5N4 469 aa9.63□□□□□ -0.87
CCDC66-221ENST00000487739 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
CCDC66-221ENST00000487739 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
CCDC66-221ENST00000487739 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
CCDC66-221ENST00000487739 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
CCDC66-221ENST00000487739 BMP2P12643 396 aa9.62□□□□□ -0.87
CCDC66-221ENST00000487739 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
CCDC66-221ENST00000487739 PPP1R26Q5T8A7 1209 aaPredicted RBP9.62□□□□□ -0.87
CCDC66-221ENST00000487739 NPAS3Q8IXF0 933 aa9.62□□□□□ -0.87
CCDC66-221ENST00000487739 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
CCDC66-221ENST00000487739 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
CCDC66-221ENST00000487739 TSEN34Q9BSV6 310 aaKnown RBP9.6□□□□□ -0.87
CCDC66-221ENST00000487739 WIPF1O43516 503 aa9.59□□□□□ -0.87
CCDC66-221ENST00000487739 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
CCDC66-221ENST00000487739 MAN1A2O60476 641 aa9.58□□□□□ -0.88
CCDC66-221ENST00000487739 DZIP3Q86Y13 1208 aaKnown RBP9.58□□□□□ -0.88
CCDC66-221ENST00000487739 SOBPA7XYQ1 873 aa9.57□□□□□ -0.88
CCDC66-221ENST00000487739 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
CCDC66-221ENST00000487739 H3BM21 787 aa9.56□□□□□ -0.88
CCDC66-221ENST00000487739 Q6ZVU0 165 aa9.56□□□□□ -0.88
CCDC66-221ENST00000487739 IRF7Q92985 503 aa9.56□□□□□ -0.88
CCDC66-221ENST00000487739 GJD4Q96KN9 370 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-221ENST00000487739 VEGFBP49765 207 aa9.55□□□□□ -0.88
CCDC66-221ENST00000487739 INSM1Q01101 510 aaPredicted RBP9.55□□□□□ -0.88
CCDC66-221ENST00000487739 CBLBQ13191 982 aa9.55□□□□□ -0.88
CCDC66-221ENST00000487739 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
CCDC66-221ENST00000487739 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
CCDC66-221ENST00000487739 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
CCDC66-221ENST00000487739 SOCS7O14512 581 aa9.53□□□□□ -0.88
CCDC66-221ENST00000487739 RAB15P59190 212 aa9.53□□□□□ -0.88
CCDC66-221ENST00000487739 APBB1O00213 710 aa9.52□□□□□ -0.89
CCDC66-221ENST00000487739 DNMT3LQ9UJW3 386 aa9.52□□□□□ -0.89
CCDC66-221ENST00000487739 TTLL8A6PVC2 850 aa9.51□□□□□ -0.89
CCDC66-221ENST00000487739 ESPNB1AK53 854 aa9.51□□□□□ -0.89
CCDC66-221ENST00000487739 SPINT1O43278 529 aa9.51□□□□□ -0.89
CCDC66-221ENST00000487739 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
CCDC66-221ENST00000487739 TRIM52Q96A61 297 aa9.51□□□□□ -0.89
CCDC66-221ENST00000487739 FBXO45P0C2W1 286 aa9.5□□□□□ -0.89
CCDC66-221ENST00000487739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.5□□□□□ -0.89
CCDC66-221ENST00000487739 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
CCDC66-221ENST00000487739 TMPRSS4Q9NRS4 437 aa9.5□□□□□ -0.89
CCDC66-221ENST00000487739 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
CCDC66-221ENST00000487739 ERVH48-1M5A8F1 160 aa9.49□□□□□ -0.89
CCDC66-221ENST00000487739 GMPRP36959 345 aa9.49□□□□□ -0.89
CCDC66-221ENST00000487739 MTMR14Q8NCE2 650 aa9.49□□□□□ -0.89
CCDC66-221ENST00000487739 NDUFB9Q9Y6M9 179 aa9.49□□□□□ -0.89
CCDC66-221ENST00000487739 ERBB4Q15303 1308 aa9.49□□□□□ -0.89
CCDC66-221ENST00000487739 RELBQ01201 579 aa9.48□□□□□ -0.89
CCDC66-221ENST00000487739 ZNF592Q92610 1267 aa9.48□□□□□ -0.89
CCDC66-221ENST00000487739 AGBL1Q96MI9 1066 aa9.48□□□□□ -0.89
CCDC66-221ENST00000487739 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
CCDC66-221ENST00000487739 ADH1AP07327 375 aa9.47□□□□□ -0.89
CCDC66-221ENST00000487739 NR1H3Q13133 447 aa9.47□□□□□ -0.89
CCDC66-221ENST00000487739 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
CCDC66-221ENST00000487739 PPFIA3O75145 1194 aa9.46□□□□□ -0.9
CCDC66-221ENST00000487739 VSIG8P0DPA2 414 aa9.46□□□□□ -0.9
CCDC66-221ENST00000487739 SNRKQ9NRH2 765 aa9.46□□□□□ -0.9
CCDC66-221ENST00000487739 FIGNL2A6NMB9 653 aa9.45□□□□□ -0.9
CCDC66-221ENST00000487739 LILRA1O75019 489 aa9.45□□□□□ -0.9
CCDC66-221ENST00000487739 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
CCDC66-221ENST00000487739 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
CCDC66-221ENST00000487739 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-221ENST00000487739 INSM2Q96T92 566 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-221ENST00000487739 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-221ENST00000487739 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-221ENST00000487739 CYLDQ9NQC7 956 aa9.44□□□□□ -0.9
CCDC66-221ENST00000487739 GPR37L1O60883 481 aa9.43□□□□□ -0.9
CCDC66-221ENST00000487739 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
CCDC66-221ENST00000487739 CTSOP43234 321 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-221ENST00000487739 PTSQ03393 145 aa9.43□□□□□ -0.9
CCDC66-221ENST00000487739 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
CCDC66-221ENST00000487739 PTGIRP43119 386 aa9.42□□□□□ -0.9
CCDC66-221ENST00000487739 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
CCDC66-221ENST00000487739 RNF217Q8TC41 542 aa9.4□□□□□ -0.9
CCDC66-221ENST00000487739 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
CCDC66-221ENST00000487739 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
CCDC66-221ENST00000487739 KDF1Q8NAX2 398 aaPredicted RBP9.39□□□□□ -0.91
CCDC66-221ENST00000487739 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
CCDC66-221ENST00000487739 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
CCDC66-221ENST00000487739 CC2D2BQ6DHV5 1058 aa9.38□□□□□ -0.91
CCDC66-221ENST00000487739 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
CCDC66-221ENST00000487739 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
CCDC66-221ENST00000487739 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
CCDC66-221ENST00000487739 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
CCDC66-221ENST00000487739 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-221ENST00000487739 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
CCDC66-221ENST00000487739 LORP23490 312 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-221ENST00000487739 LYSMD3Q7Z3D4 306 aa9.35□□□□□ -0.91
CCDC66-221ENST00000487739 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms