RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 PDE4DQ08499 809 aa9.56□□□□□ -0.88
UBR3-211ENST00000487689 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
UBR3-211ENST00000487689 BCANQ96GW7 911 aa9.56□□□□□ -0.88
UBR3-211ENST00000487689 CDC14CA4D256 554 aa9.55□□□□□ -0.88
UBR3-211ENST00000487689 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
UBR3-211ENST00000487689 FOXK2Q01167 660 aa9.55□□□□□ -0.88
UBR3-211ENST00000487689 CABLES1Q8TDN4 633 aa9.55□□□□□ -0.88
UBR3-211ENST00000487689 SLC24A3Q9HC58 644 aa9.55□□□□□ -0.88
UBR3-211ENST00000487689 ITGA6P23229 1130 aa9.54□□□□□ -0.88
UBR3-211ENST00000487689 CBLBQ13191 982 aa9.54□□□□□ -0.88
UBR3-211ENST00000487689 SV2AQ7L0J3 742 aa9.54□□□□□ -0.88
UBR3-211ENST00000487689 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
UBR3-211ENST00000487689 TRMT44Q8IYL2 757 aaKnown RBP9.54□□□□□ -0.88
UBR3-211ENST00000487689 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
UBR3-211ENST00000487689 MAGEB6P1A0A0J9YX57 407 aa9.53□□□□□ -0.88
UBR3-211ENST00000487689 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
UBR3-211ENST00000487689 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
UBR3-211ENST00000487689 SPINT1O43278 529 aa9.53□□□□□ -0.88
UBR3-211ENST00000487689 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
UBR3-211ENST00000487689 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
UBR3-211ENST00000487689 TSC1Q92574 1164 aa9.53□□□□□ -0.88
UBR3-211ENST00000487689 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
UBR3-211ENST00000487689 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
UBR3-211ENST00000487689 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
UBR3-211ENST00000487689 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
UBR3-211ENST00000487689 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
UBR3-211ENST00000487689 SH3BP5LQ7L8J4 393 aa9.52□□□□□ -0.89
UBR3-211ENST00000487689 XP32Q5T750 250 aa9.51□□□□□ -0.89
UBR3-211ENST00000487689 Q6ZVU0 165 aa9.51□□□□□ -0.89
UBR3-211ENST00000487689 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
UBR3-211ENST00000487689 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
UBR3-211ENST00000487689 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
UBR3-211ENST00000487689 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
UBR3-211ENST00000487689 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
UBR3-211ENST00000487689 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
UBR3-211ENST00000487689 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
UBR3-211ENST00000487689 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
UBR3-211ENST00000487689 ERFEQ4G0M1 354 aa9.47□□□□□ -0.89
UBR3-211ENST00000487689 HELBQ8NG08 1087 aaPredicted RBP9.47□□□□□ -0.89
UBR3-211ENST00000487689 MAP3K10Q02779 954 aa9.46□□□□□ -0.9
UBR3-211ENST00000487689 AGBL1Q96MI9 1066 aa9.46□□□□□ -0.9
UBR3-211ENST00000487689 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
UBR3-211ENST00000487689 INSM2Q96T92 566 aaPredicted RBP9.45□□□□□ -0.9
UBR3-211ENST00000487689 MSTNO14793 375 aa9.44□□□□□ -0.9
UBR3-211ENST00000487689 RELBQ01201 579 aa9.44□□□□□ -0.9
UBR3-211ENST00000487689 QPCTQ16769 361 aa9.44□□□□□ -0.9
UBR3-211ENST00000487689 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
UBR3-211ENST00000487689 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
UBR3-211ENST00000487689 ADAM23O75077 832 aa9.43□□□□□ -0.9
UBR3-211ENST00000487689 CELA2BP08218 269 aaPredicted RBP9.43□□□□□ -0.9
UBR3-211ENST00000487689 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
UBR3-211ENST00000487689 SRSF11Q05519 484 aaKnown RBP9.43□□□□□ -0.9
UBR3-211ENST00000487689 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
UBR3-211ENST00000487689 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
UBR3-211ENST00000487689 LIMD1Q9UGP4 676 aa9.43□□□□□ -0.9
UBR3-211ENST00000487689 RNF217Q8TC41 542 aa9.42□□□□□ -0.9
UBR3-211ENST00000487689 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
UBR3-211ENST00000487689 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
UBR3-211ENST00000487689 GAS6Q14393 721 aa9.41□□□□□ -0.9
UBR3-211ENST00000487689 LILRB3O75022 631 aa9.4□□□□□ -0.9
UBR3-211ENST00000487689 DHX9Q08211 1270 aaKnown RBP9.4□□□□□ -0.9
UBR3-211ENST00000487689 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
UBR3-211ENST00000487689 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
UBR3-211ENST00000487689 SPOCK3Q9BQ16 436 aa9.4□□□□□ -0.9
UBR3-211ENST00000487689 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
UBR3-211ENST00000487689 ENAMQ9NRM1 1142 aa9.4□□□□□ -0.9
UBR3-211ENST00000487689 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
UBR3-211ENST00000487689 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
UBR3-211ENST00000487689 SLC10A4Q96EP9 437 aa9.39□□□□□ -0.91
UBR3-211ENST00000487689 CUEDC1Q9NWM3 386 aaPredicted RBP9.39□□□□□ -0.91
UBR3-211ENST00000487689 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
UBR3-211ENST00000487689 ITGB2P05107 769 aa9.38□□□□□ -0.91
UBR3-211ENST00000487689 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
UBR3-211ENST00000487689 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
UBR3-211ENST00000487689 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
UBR3-211ENST00000487689 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
UBR3-211ENST00000487689 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
UBR3-211ENST00000487689 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
UBR3-211ENST00000487689 KDM4CQ9H3R0 1056 aa9.35□□□□□ -0.91
UBR3-211ENST00000487689 PROCP04070 461 aa9.34□□□□□ -0.91
UBR3-211ENST00000487689 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
UBR3-211ENST00000487689 PODNQ7Z5L7 613 aa9.33□□□□□ -0.92
UBR3-211ENST00000487689 ZBTB33Q86T24 672 aa9.33□□□□□ -0.92
UBR3-211ENST00000487689 BEND7Q8N7W2 519 aaPredicted RBP9.33□□□□□ -0.92
UBR3-211ENST00000487689 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
UBR3-211ENST00000487689 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
UBR3-211ENST00000487689 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
UBR3-211ENST00000487689 PNMA1Q8ND90 353 aa9.32□□□□□ -0.92
UBR3-211ENST00000487689 NEDD1Q8NHV4 660 aa9.32□□□□□ -0.92
UBR3-211ENST00000487689 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
UBR3-211ENST00000487689 ADH1AP07327 375 aa9.31□□□□□ -0.92
UBR3-211ENST00000487689 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
UBR3-211ENST00000487689 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
UBR3-211ENST00000487689 FKBPLQ9UIM3 349 aa9.31□□□□□ -0.92
UBR3-211ENST00000487689 IGF1RP08069 1367 aa9.31□□□□□ -0.92
UBR3-211ENST00000487689 GPR25O00155 361 aa9.3□□□□□ -0.92
UBR3-211ENST00000487689 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
UBR3-211ENST00000487689 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
UBR3-211ENST00000487689 BCRP11274 1271 aa9.29□□□□□ -0.92
UBR3-211ENST00000487689 PTGIRP43119 386 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms