RNA–Protein interactions for RNA: ENST00000487678.1

PDCD10-213, Transcript of programmed cell death 10, humanhuman

TSL 3

Gene PDCD10, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-213ENST00000487678 FIGNL2A6NMB9 653 aa12.66□□□□□ -0.38
PDCD10-213ENST00000487678 NR6A1Q15406 480 aa12.66□□□□□ -0.38
PDCD10-213ENST00000487678 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
PDCD10-213ENST00000487678 TSEN34Q9BSV6 310 aaKnown RBP12.65□□□□□ -0.38
PDCD10-213ENST00000487678 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
PDCD10-213ENST00000487678 ARHGAP9Q9BRR9 750 aa12.64□□□□□ -0.39
PDCD10-213ENST00000487678 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
PDCD10-213ENST00000487678 TTLL8A6PVC2 850 aa12.63□□□□□ -0.39
PDCD10-213ENST00000487678 Q6ZVU0 165 aa12.63□□□□□ -0.39
PDCD10-213ENST00000487678 EPS8L1Q8TE68 723 aa12.63□□□□□ -0.39
PDCD10-213ENST00000487678 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
PDCD10-213ENST00000487678 FKBPLQ9UIM3 349 aa12.63□□□□□ -0.39
PDCD10-213ENST00000487678 PTSQ03393 145 aa12.62□□□□□ -0.39
PDCD10-213ENST00000487678 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.393e-7■■■□□ 18.9
PDCD10-213ENST00000487678 PDXDC2PQ6P474 469 aa12.61□□□□□ -0.39
PDCD10-213ENST00000487678 KCTD15Q96SI1 283 aaPredicted RBP12.61□□□□□ -0.39
PDCD10-213ENST00000487678 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
PDCD10-213ENST00000487678 SPINT1O43278 529 aa12.58□□□□□ -0.4
PDCD10-213ENST00000487678 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.4
PDCD10-213ENST00000487678 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDCD10-213ENST00000487678 CTSOP43234 321 aaPredicted RBP12.57□□□□□ -0.4
PDCD10-213ENST00000487678 GSK3AP49840 483 aa12.57□□□□□ -0.4
PDCD10-213ENST00000487678 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
PDCD10-213ENST00000487678 INTS6LQ5JSJ4 861 aaKnown RBP12.57□□□□□ -0.4
PDCD10-213ENST00000487678 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
PDCD10-213ENST00000487678 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
PDCD10-213ENST00000487678 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
PDCD10-213ENST00000487678 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
PDCD10-213ENST00000487678 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
PDCD10-213ENST00000487678 TMPRSS4Q9NRS4 437 aa12.56□□□□□ -0.4
PDCD10-213ENST00000487678 RELBQ01201 579 aa12.55□□□□□ -0.4
PDCD10-213ENST00000487678 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
PDCD10-213ENST00000487678 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
PDCD10-213ENST00000487678 ZBTB33Q86T24 672 aa12.55□□□□□ -0.4
PDCD10-213ENST00000487678 CCDC155Q8N6L0 562 aa12.55□□□□□ -0.4
PDCD10-213ENST00000487678 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
PDCD10-213ENST00000487678 AP1G2O75843 785 aa12.54□□□□□ -0.4
PDCD10-213ENST00000487678 ADAM32Q8TC27 787 aa12.54□□□□□ -0.4
PDCD10-213ENST00000487678 INSM2Q96T92 566 aaPredicted RBP12.54□□□□□ -0.4
PDCD10-213ENST00000487678 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
PDCD10-213ENST00000487678 COL25A1Q9BXS0 654 aaPredicted RBP12.53□□□□□ -0.4
PDCD10-213ENST00000487678 ZNF395Q9H8N7 513 aaPredicted RBP12.53□□□□□ -0.4
PDCD10-213ENST00000487678 RAB15P59190 212 aa12.52□□□□□ -0.41
PDCD10-213ENST00000487678 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
PDCD10-213ENST00000487678 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
PDCD10-213ENST00000487678 KDF1Q8NAX2 398 aaPredicted RBP12.49□□□□□ -0.41
PDCD10-213ENST00000487678 ZNF784Q8NCA9 323 aaPredicted RBP12.49□□□□□ -0.41
PDCD10-213ENST00000487678 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
PDCD10-213ENST00000487678 PTK2Q05397 1052 aa12.48□□□□□ -0.41
PDCD10-213ENST00000487678 VWA5B2Q8N398 1253 aa12.48□□□□□ -0.41
PDCD10-213ENST00000487678 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
PDCD10-213ENST00000487678 NANOS1Q8WY41 292 aaKnown RBP12.48□□□□□ -0.41
PDCD10-213ENST00000487678 ZC3H4Q9UPT8 1303 aaKnown RBP12.47□□□□□ -0.41
PDCD10-213ENST00000487678 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
PDCD10-213ENST00000487678 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
PDCD10-213ENST00000487678 LILRA1O75019 489 aa12.46□□□□□ -0.41
PDCD10-213ENST00000487678 DHX9Q08211 1270 aaKnown RBP12.46□□□□□ -0.41
PDCD10-213ENST00000487678 KCTD17Q8N5Z5 321 aa12.46□□□□□ -0.41
PDCD10-213ENST00000487678 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
PDCD10-213ENST00000487678 CDV3Q9UKY7 258 aaKnown RBP12.46□□□□□ -0.41
PDCD10-213ENST00000487678 ERVH48-1M5A8F1 160 aa12.45□□□□□ -0.42
PDCD10-213ENST00000487678 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
PDCD10-213ENST00000487678 ITGA6P23229 1130 aa12.45□□□□□ -0.42
PDCD10-213ENST00000487678 KCNMA1Q12791 1236 aa12.45□□□□□ -0.42
PDCD10-213ENST00000487678 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
PDCD10-213ENST00000487678 ZNF385CQ66K41 422 aaPredicted RBP12.45□□□□□ -0.42
PDCD10-213ENST00000487678 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
PDCD10-213ENST00000487678 CDC14CA4D256 554 aa12.43□□□□□ -0.42
PDCD10-213ENST00000487678 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
PDCD10-213ENST00000487678 GPSM3Q9Y4H4 160 aa12.43□□□□□ -0.42
PDCD10-213ENST00000487678 CUEDC1Q9NWM3 386 aaPredicted RBP12.42□□□□□ -0.42
PDCD10-213ENST00000487678 ADH1AP07327 375 aa12.4□□□□□ -0.42
PDCD10-213ENST00000487678 RFC5P40937 340 aa12.4□□□□□ -0.42
PDCD10-213ENST00000487678 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
PDCD10-213ENST00000487678 LOC100996750A0A140TA64 210 aa12.39□□□□□ -0.43
PDCD10-213ENST00000487678 ESPNB1AK53 854 aa12.39□□□□□ -0.43
PDCD10-213ENST00000487678 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
PDCD10-213ENST00000487678 KRTAP4-6Q9BYQ5 205 aa12.39□□□□□ -0.43
PDCD10-213ENST00000487678 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
PDCD10-213ENST00000487678 CYLDQ9NQC7 956 aa12.38□□□□□ -0.43
PDCD10-213ENST00000487678 PTGIRP43119 386 aa12.37□□□□□ -0.43
PDCD10-213ENST00000487678 RASSF7Q02833 373 aa12.37□□□□□ -0.43
PDCD10-213ENST00000487678 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
PDCD10-213ENST00000487678 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
PDCD10-213ENST00000487678 SVOPQ8N4V2 548 aa12.36□□□□□ -0.43
PDCD10-213ENST00000487678 ARHGEF15O94989 841 aa12.34□□□□□ -0.43
PDCD10-213ENST00000487678 GDF11O95390 407 aa12.33□□□□□ -0.44
PDCD10-213ENST00000487678 RHOQP17081 205 aa12.33□□□□□ -0.44
PDCD10-213ENST00000487678 GAS6Q14393 721 aa12.33□□□□□ -0.44
PDCD10-213ENST00000487678 SUZ12Q15022 739 aaKnown RBP12.33□□□□□ -0.44
PDCD10-213ENST00000487678 TMEM151AQ8N4L1 468 aa12.33□□□□□ -0.44
PDCD10-213ENST00000487678 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
PDCD10-213ENST00000487678 PRICKLE2Q7Z3G6 844 aa12.32□□□□□ -0.44
PDCD10-213ENST00000487678 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
PDCD10-213ENST00000487678 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
PDCD10-213ENST00000487678 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
PDCD10-213ENST00000487678 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
PDCD10-213ENST00000487678 FBXO45P0C2W1 286 aa12.28□□□□□ -0.44
PDCD10-213ENST00000487678 IRS1P35568 1242 aa12.27□□□□□ -0.45
PDCD10-213ENST00000487678 RNF144AP50876 292 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms